; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009203 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009203
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUbiquitin family protein
Genome locationchr06:25818578..25818817
RNA-Seq ExpressionPI0009203
SyntenyPI0009203
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABC94632.1 ubiquitin C, partial [Ictalurus punctatus]1.9e-1251.32Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG
        MQIFVK+  GK ++LE+EP+ TIG++KAK++ K  I  + Q+L +AGK +ED +TL+DY+I+ +S L L +RL GG
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG

ACH45552.1 putative ubiquitin C variant 1 [Taeniopygia guttata]6.5e-1352.63Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG
        M IFVK+  GK +SLE+EPT TI ++KAK++AK  I  + Q+L +AGK +ED +TL+DY+I+ +S+L L +RL GG
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG

CAI83761.1 Polyubiqutin 2, partial [Epidinium ecaudatum]1.5e-1251.32Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG
        MQIFVK+F GK ++L++EP+ TI ++KAK++ K  I  + Q+L +AGK +ED++TLADY+I+ +S L L +RL GG
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG

KAE8650141.1 hypothetical protein Csa_010182 [Cucumis sativus]2.2e-2168.83Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF
        MQIFVK+FDGK++SL+LEPTATI  LKAKLEAKY +RA++Q + YAGK +E+H+TLA+ +IKNDS L+L IRL GGF
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF

XP_007604823.1 ubiquitin-40S ribosomal protein S27a [Vittaforma corneae ATCC 50505]1.5e-1251.32Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG
        MQIFVK+  GK+++LE+EP+ TI S+KAK++ K  I  + Q+L +AGK +ED +TL+DY+I+ +S L L +RL GG
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG

TrEMBL top hitse value%identityAlignment
A0A0A0L314 Ubiquitin-like domain-containing protein9.8e-2369.62Show/hide
Query:  MQMQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF
        MQMQIFVK+FDGK++SL+LEPTATI  LKAKLEAKY +RA++Q + YAGK +E+H+TLA+ +IKNDS L+L IRL GGF
Subjt:  MQMQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF

A0A6C0HA42 Ubiquitin-like domain-containing protein9.2e-1350Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG
        MQIFVK+  GK +++E+EPT TI ++K K++AK  I ++ Q+L +AGK +ED +TLADY+++ +S L L +RL GG
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG

B5G2P1 Putative ubiquitin C variant 13.2e-1352.63Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG
        M IFVK+  GK +SLE+EPT TI ++KAK++AK  I  + Q+L +AGK +ED +TL+DY+I+ +S+L L +RL GG
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG

L2GLY6 Ubiquitin-40S ribosomal protein S27a7.0e-1351.32Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG
        MQIFVK+  GK+++LE+EP+ TI S+KAK++ K  I  + Q+L +AGK +ED +TL+DY+I+ +S L L +RL GG
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG

Q1RQE6 Polyubiqutin 2 (Fragment)7.0e-1351.32Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG
        MQIFVK+F GK ++L++EP+ TI ++KAK++ K  I  + Q+L +AGK +ED++TLADY+I+ +S L L +RL GG
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGG

SwissProt top hitse value%identityAlignment
P0CG49 Polyubiquitin-B9.5e-1549.35Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF
        MQIFVK+  GK ++LE+EP+ TI ++KAK++ K  I  + Q+L +AGK +ED +TL+DY+I+ +S L L +RL GG+
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF

P0CG51 Polyubiquitin-B9.5e-1549.35Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF
        MQIFVK+  GK ++LE+EP+ TI ++KAK++ K  I  + Q+L +AGK +ED +TL+DY+I+ +S L L +RL GG+
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF

P0CG62 Polyubiquitin-B9.5e-1549.35Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF
        MQIFVK+  GK ++LE+EP+ TI ++KAK++ K  I  + Q+L +AGK +ED +TL+DY+I+ +S L L +RL GG+
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF

P0CG68 Polyubiquitin-C4.3e-1550.65Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF
        MQIFVK+  GK ++LE+EP+ TI ++KAK++ K  I  + Q+L +AGK +ED +TL+DY+I+ +S L L +RL GGF
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF

P0CG85 Polyubiquitin1.2e-1450.65Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF
        MQIFVK+  GK ++LE+E + TI ++KAK++ K  I  + Q+L +AGK +ED +TLADY+I+ +S L L +RL GGF
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF

Arabidopsis top hitse value%identityAlignment
AT4G02890.1 Ubiquitin family protein8.8e-1650.65Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF
        MQIFVK+  GK ++LE+E + TI ++KAK++ K  I  + Q+L +AGK +ED +TLADY+I+ +S L L +RL GGF
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF

AT4G05050.1 ubiquitin 118.8e-1650.65Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF
        MQIFVK+  GK ++LE+E + TI ++KAK++ K  I  + Q+L +AGK +ED +TLADY+I+ +S L L +RL GGF
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF

AT4G05320.2 polyubiquitin 108.8e-1650.65Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF
        MQIFVK+  GK ++LE+E + TI ++KAK++ K  I  + Q+L +AGK +ED +TLADY+I+ +S L L +RL GGF
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF

AT4G05320.3 polyubiquitin 108.8e-1650.65Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF
        MQIFVK+  GK ++LE+E + TI ++KAK++ K  I  + Q+L +AGK +ED +TLADY+I+ +S L L +RL GGF
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF

AT4G05320.4 polyubiquitin 108.8e-1650.65Show/hide
Query:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF
        MQIFVK+  GK ++LE+E + TI ++KAK++ K  I  + Q+L +AGK +ED +TLADY+I+ +S L L +RL GGF
Subjt:  MQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGATGCAGATCTTCGTGAAGTCATTTGATGGGAAAATAATGAGTTTAGAATTGGAACCAACGGCCACAATTGGAAGTTTGAAGGCTAAACTAGAAGCTAAGTATAA
CATACGTGCTGAAACTCAAAAGCTTACTTATGCAGGAAAGAATGTGGAAGATCATCAAACTCTTGCAGATTATGATATTAAGAATGATTCTGTATTGTTTTTGACTATTC
GTCTATATGGTGGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGATGCAGATCTTCGTGAAGTCATTTGATGGGAAAATAATGAGTTTAGAATTGGAACCAACGGCCACAATTGGAAGTTTGAAGGCTAAACTAGAAGCTAAGTATAA
CATACGTGCTGAAACTCAAAAGCTTACTTATGCAGGAAAGAATGTGGAAGATCATCAAACTCTTGCAGATTATGATATTAAGAATGATTCTGTATTGTTTTTGACTATTC
GTCTATATGGTGGCTTTTAA
Protein sequenceShow/hide protein sequence
MQMQIFVKSFDGKIMSLELEPTATIGSLKAKLEAKYNIRAETQKLTYAGKNVEDHQTLADYDIKNDSVLFLTIRLYGGF