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PI0009220 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009220
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNA-dependent RNA polymerase
Genome locationtig00003626:616227..617230
RNA-Seq ExpressionPI0009220
SyntenyPI0009220
Gene Ontology termsGO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAC76753.1 TPA_inf: RNA-dependent RNA polymerase [Beta vulgaris mitovirus 1]2.9e-0750.75Show/hide
Query:  LVLCYGPISIQELDFDAPVVETHWKARQRDD--LRFGRLWKCYDLLGSLGLDYRPGILSYEA-PLLG
        LV     ++I++L  D PVV THW  RQ ++  +RFG LWKCYD + SLGLD+ PG L   A PL G
Subjt:  LVLCYGPISIQELDFDAPVVETHWKARQRDD--LRFGRLWKCYDLLGSLGLDYRPGILSYEA-PLLG

GFS28720.1 hypothetical protein Acr_00g0003520 [Actinidia rufa]1.7e-0753.33Show/hide
Query:  ISIQELDFDAPVVETHWKARQRDDL--RFGRLWKCYDLLGSLGLDYRPGIL-SYEAPLLG
        +++++L FD P+VE  W+   ++ L  RFG LWKCYD +G  GLD+RPGIL S+E PLLG
Subjt:  ISIQELDFDAPVVETHWKARQRDDL--RFGRLWKCYDLLGSLGLDYRPGIL-SYEAPLLG

GFY86464.1 hypothetical protein Acr_05g0001030 [Actinidia rufa]1.7e-0753.33Show/hide
Query:  ISIQELDFDAPVVETHWKARQRDDL--RFGRLWKCYDLLGSLGLDYRPGIL-SYEAPLLG
        +++++L FD P+VE  W+   ++ L  RFG LWKCYD +G  GLD+RPGIL S+E PLLG
Subjt:  ISIQELDFDAPVVETHWKARQRDDL--RFGRLWKCYDLLGSLGLDYRPGIL-SYEAPLLG

GFZ09045.1 hypothetical protein Acr_20g0008530 [Actinidia rufa]1.3e-0747.5Show/hide
Query:  MDESLVPSSSLVL--CYGP-ISIQELDFDAPVVETHWKARQRDDL--RFGRLWKCYDLLGSLGLDYRPGIL-SYEAPLLG
        +DE++    SLVL     P +++++L FD P+VE  W+   ++ L  RFG LWKCYD +G  GL +RPGIL S+E PLLG
Subjt:  MDESLVPSSSLVL--CYGP-ISIQELDFDAPVVETHWKARQRDDL--RFGRLWKCYDLLGSLGLDYRPGIL-SYEAPLLG

KAA0058323.1 RNA-dependent RNA polymerase, mitoviral [Cucumis melo var. makuwa]6.5e-0754.9Show/hide
Query:  ISIQELDFDAPVVETHWKARQRDDLR--FGRLWKCYDLLGSLGLDYRPGIL
        +SI++L   APVV THW   ++D+ +  FG +WKCYD+L SLGLD RPG+L
Subjt:  ISIQELDFDAPVVETHWKARQRDDLR--FGRLWKCYDLLGSLGLDYRPGIL

TrEMBL top hitse value%identityAlignment
A0A2Z6JJR3 RNA-dependent RNA polymerase5.4e-0746.67Show/hide
Query:  ISIQELDFDAPVVETHWKARQRDD--LRFGRLWKCYDLLGSLGLDYRPGILSYEAPLLGG
        +++++L  D P+V THW  RQ ++  +RFG LWKCYD + +LGLD+ PG L   A  L G
Subjt:  ISIQELDFDAPVVETHWKARQRDD--LRFGRLWKCYDLLGSLGLDYRPGILSYEAPLLGG

A0A5A7UR24 RNA-dependent RNA polymerase, mitoviral3.1e-0754.9Show/hide
Query:  ISIQELDFDAPVVETHWKARQRDDLR--FGRLWKCYDLLGSLGLDYRPGIL
        +SI++L   APVV THW   ++D+ +  FG +WKCYD+L SLGLD RPG+L
Subjt:  ISIQELDFDAPVVETHWKARQRDDLR--FGRLWKCYDLLGSLGLDYRPGIL

A0A7J0D8K6 Uncharacterized protein8.3e-0853.33Show/hide
Query:  ISIQELDFDAPVVETHWKARQRDDL--RFGRLWKCYDLLGSLGLDYRPGIL-SYEAPLLG
        +++++L FD P+VE  W+   ++ L  RFG LWKCYD +G  GLD+RPGIL S+E PLLG
Subjt:  ISIQELDFDAPVVETHWKARQRDDL--RFGRLWKCYDLLGSLGLDYRPGIL-SYEAPLLG

A0A7J0EJ20 Uncharacterized protein8.3e-0853.33Show/hide
Query:  ISIQELDFDAPVVETHWKARQRDDL--RFGRLWKCYDLLGSLGLDYRPGIL-SYEAPLLG
        +++++L FD P+VE  W+   ++ L  RFG LWKCYD +G  GLD+RPGIL S+E PLLG
Subjt:  ISIQELDFDAPVVETHWKARQRDDL--RFGRLWKCYDLLGSLGLDYRPGIL-SYEAPLLG

A0A7J0GE65 Uncharacterized protein6.3e-0847.5Show/hide
Query:  MDESLVPSSSLVL--CYGP-ISIQELDFDAPVVETHWKARQRDDL--RFGRLWKCYDLLGSLGLDYRPGIL-SYEAPLLG
        +DE++    SLVL     P +++++L FD P+VE  W+   ++ L  RFG LWKCYD +G  GL +RPGIL S+E PLLG
Subjt:  MDESLVPSSSLVL--CYGP-ISIQELDFDAPVVETHWKARQRDDL--RFGRLWKCYDLLGSLGLDYRPGIL-SYEAPLLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGAGCTTGGTTCCGTCTAGTTCATTGGTATTGTGCTACGGCCCTATCTCTATACAGGAACTAGACTTTGATGCACCAGTCGTAGAAACCCATTGGAAGGCGAG
GCAGCGGGATGACCTTCGCTTTGGGCGCCTGTGGAAGTGCTATGATTTGCTTGGTTCTCTTGGGTTAGATTATAGACCCGGAATACTAAGCTATGAGGCTCCACTTCTTG
GAGGCACAACTGCAAATGTAGTTTCTTACCGCGTAGTGGGCATTCCAACTGTCAGGGATTACCTTAGGACAACTGGAAATGGGACGGGAGAGGCTTTAGCAACTAATCTC
TCAGCTGAAATAGCAGCCTCCACTTCCCTCTTTGAAAGAGCCTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGAGCTTGGTTCCGTCTAGTTCATTGGTATTGTGCTACGGCCCTATCTCTATACAGGAACTAGACTTTGATGCACCAGTCGTAGAAACCCATTGGAAGGCGAG
GCAGCGGGATGACCTTCGCTTTGGGCGCCTGTGGAAGTGCTATGATTTGCTTGGTTCTCTTGGGTTAGATTATAGACCCGGAATACTAAGCTATGAGGCTCCACTTCTTG
GAGGCACAACTGCAAATGTAGTTTCTTACCGCGTAGTGGGCATTCCAACTGTCAGGGATTACCTTAGGACAACTGGAAATGGGACGGGAGAGGCTTTAGCAACTAATCTC
TCAGCTGAAATAGCAGCCTCCACTTCCCTCTTTGAAAGAGCCTACTAA
Protein sequenceShow/hide protein sequence
MDESLVPSSSLVLCYGPISIQELDFDAPVVETHWKARQRDDLRFGRLWKCYDLLGSLGLDYRPGILSYEAPLLGGTTANVVSYRVVGIPTVRDYLRTTGNGTGEALATNL
SAEIAASTSLFERAY