; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009222 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009222
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:6378284..6378448
RNA-Seq ExpressionPI0009222
SyntenyPI0009222
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053146.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.4e-1164.81Show/hide
Query:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ
        MTN+D+ +D+DE DST+ATTAGDDI Y+E++NEW++WKD+ AEEM S W+L NQ
Subjt:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ

KAA0067286.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.4e-1166.67Show/hide
Query:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ
        MTN D+ +D+DE DST+ATTA DDI Y+E+SNEWS+W+DD AEEM S W+L NQ
Subjt:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ

TYK10899.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.4e-1166.67Show/hide
Query:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ
        MTN D+ +D+DE DST+ATTA DDI Y+E+SNEWS+W+DD AEEM S W+L NQ
Subjt:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ

XP_031740445.1 uncharacterized protein LOC116403439 [Cucumis sativus]1.1e-1166.67Show/hide
Query:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ
        MTNV  ++DVDEGDSTYAT  GDDIQ+VE+SNEW++W+DD A EM ++WQL+N+
Subjt:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ

XP_031741750.1 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like [Cucumis sativus]7.1e-1166.67Show/hide
Query:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ
        MTNVD ++DVDEGDSTYAT  GDDIQ+VE+SNEW++ +DD A EM ++WQL N+
Subjt:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ

TrEMBL top hitse value%identityAlignment
A0A5A7SYE7 Putative nuclease HARBI14.5e-1164.81Show/hide
Query:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ
        MTN D+ +++DE DST+ATTA DDI Y+E SNEWS+W+DD AEEM S+W+L+NQ
Subjt:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ

A0A5A7UFY9 Putative nuclease HARBI17.0e-1264.81Show/hide
Query:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ
        MTN+D+ +D+DE DST+ATTAGDDI Y+E++NEW++WKD+ AEEM S W+L NQ
Subjt:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ

A0A5A7VLF4 Putative nuclease HARBI11.2e-1166.67Show/hide
Query:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ
        MTN D+ +D+DE DST+ATTA DDI Y+E+SNEWS+W+DD AEEM S W+L NQ
Subjt:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ

A0A5D3CKZ1 Putative nuclease HARBI11.2e-1166.67Show/hide
Query:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ
        MTN D+ +D+DE DST+ATTA DDI Y+E+SNEWS+W+DD AEEM S W+L NQ
Subjt:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ

A0A5D3D9Z3 Retrotransposon protein5.9e-1162.96Show/hide
Query:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ
        MTN D+ +++DE DST+ATTA DDI Y+E+SNEWS+W+DD AEEM ++W+L+NQ
Subjt:  MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACGTCGATGTAATAGAGGACGTCGACGAAGGTGACTCAACATACGCAACGACTGCAGGTGATGACATTCAGTATGTTGAGAGCTCGAACGAATGGAGTAAGTG
GAAGGACGATAAAGCAGAGGAAATGTCCAGTCAATGGCAATTGCAGAATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAACGTCGATGTAATAGAGGACGTCGACGAAGGTGACTCAACATACGCAACGACTGCAGGTGATGACATTCAGTATGTTGAGAGCTCGAACGAATGGAGTAAGTG
GAAGGACGATAAAGCAGAGGAAATGTCCAGTCAATGGCAATTGCAGAATCAGTAG
Protein sequenceShow/hide protein sequence
MTNVDVIEDVDEGDSTYATTAGDDIQYVESSNEWSKWKDDKAEEMSSQWQLQNQ