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PI0009234 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009234
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibonuclease DdI-like
Genome locationchr09:19802234..19804109
RNA-Seq ExpressionPI0009234
SyntenyPI0009234
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039499.1 ribonuclease DdI-like [Cucumis melo var. makuwa]2.1e-7966.81Show/hide
Query:  MLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL------------------------------------------------ITSIRKD
        M NLLI  ALNE+EEDI F+E KND HS  DLEGMKEI FDYYQL                                                +TSIRK+
Subjt:  MLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL------------------------------------------------ITSIRKD

Query:  LDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPALRCNLNIKYLFQSQL
        LD+DWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLAL+LFWRSDVQKALQ+FGIEPINGKQYEKS IE AIT+ FG+PALRCNL+ KY  QSQL
Subjt:  LDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPALRCNLNIKYLFQSQL

Query:  AQVVLCFDKCLAHINCPSQYSPALGCPTRILWNKT
        AQVVLCF+KCLA I+CPSQYSPALGCPT+ILW KT
Subjt:  AQVVLCFDKCLAHINCPSQYSPALGCPTRILWNKT

KAG6578584.1 Ribonuclease DdI, partial [Cucurbita argyrosperma subsp. sororia]9.3e-5649.4Show/hide
Query:  MAKKKSLFILLCTLMLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL-----------------------------------------
        MA K + F+LL  L+LN+L    L    +DIAFMES +   SS +LE MK + FDYYQL                                         
Subjt:  MAKKKSLFILLCTLMLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL-----------------------------------------

Query:  -------ITSIRKDLDEDWPSL-IISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPA
               I+SIR++LDEDWP L +I SNPAVW + W+LHGTCFETPTFQI+DYFRL L+LFWRSDV +AL+++G+EP++G++Y   D E  +  SFG+PA
Subjt:  -------ITSIRKDLDEDWPSL-IISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPA

Query:  LRCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCPTR--ILWNK
        LRC+ N+KY  Q QLA+V LCFDKCL HINCPSQYS A GCP    ILW K
Subjt:  LRCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCPTR--ILWNK

XP_004148696.1 ribonuclease DdI [Cucumis sativus]2.7e-8768.67Show/hide
Query:  MAKKKSLFILLCTLMLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL-----------------------------------------
        MAKKKSLFILLC LMLNLLI  ALN +EE+IAF ESKND  S Y LE MKE+ FDYYQL                                         
Subjt:  MAKKKSLFILLCTLMLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL-----------------------------------------

Query:  -------ITSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPAL
               ITSIRK+LDEDWPSL+IS+NPAVWSEAWNL GTCFE+PTFQINDYFRLAL+LFWRSDVQKALQE GIEPINGKQYEKSDIE AITKSFG+PAL
Subjt:  -------ITSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPAL

Query:  RCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCPTRILWNKT
        RCNLN+KYL QSQL+QV LCFDKCLAHI+CPS+YSPALGCPT+ILWNKT
Subjt:  RCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCPTRILWNKT

XP_023551239.1 ribonuclease DdI-like [Cucurbita pepo subsp. pepo]6.7e-5449.4Show/hide
Query:  MAKKKSLFILLCTLMLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL-----------------------------------------
        MA + + F+LL  L+LN+L   ALN     IA +ES ND  S  +LE MK + FDYYQL                                         
Subjt:  MAKKKSLFILLCTLMLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL-----------------------------------------

Query:  -------ITSIRKDLDEDWPSL-IISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPA
               I+SIR++LDEDWPSL +I SNPAVW + W+LHGTC ETPTFQI+DYFRLAL+LFWRSDV +AL+++G+EP++G++Y   D E  +  SFG+PA
Subjt:  -------ITSIRKDLDEDWPSL-IISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPA

Query:  LRCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCPTR--ILWNK
        LRC+ N+KY  Q QLA+V LCFDKCL HINCPSQYS A GCP    ILW K
Subjt:  LRCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCPTR--ILWNK

XP_038889664.1 ribonuclease MC-like [Benincasa hispida]7.8e-7961.22Show/hide
Query:  MAKKKSLFILLCTLMLNLLIVVALNEVEED--------------IAFMESKNDDHSSYDLEGMKEISFDYYQL---------------------------
        M+KKKSLF+LLC L+LNLLI  AL+E+E+D              +AFMESKN+DHS YDLE MK + FDYYQL                           
Subjt:  MAKKKSLFILLCTLMLNLLIVVALNEVEED--------------IAFMESKNDDHSSYDLEGMKEISFDYYQL---------------------------

Query:  ---------------------ITSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSD
                             ITSIRK+LDEDWPSLIISSNPAVWSEAWNL GTCFETPTFQI DYFRLAL+LFWRSDVQ+ALQ+ G+EPINGK+Y KSD
Subjt:  ---------------------ITSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSD

Query:  IEDAITKSFGRPALRCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCPTRILWNKT
        IE A+TKSFG+PALRC LN+KYL QSQLA+VVLCFDKCL +I+CPSQYS A  CPTRILW KT
Subjt:  IEDAITKSFGRPALRCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCPTRILWNKT

TrEMBL top hitse value%identityAlignment
A0A0A0KS79 Uncharacterized protein5.3e-8167.23Show/hide
Query:  MLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL------------------------------------------------ITSIRKD
        MLNLLI  ALN +EE+IAF ESKND  S Y LE MKE+ FDYYQL                                                ITSIRK+
Subjt:  MLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL------------------------------------------------ITSIRKD

Query:  LDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPALRCNLNIKYLFQSQL
        LDEDWPSL+IS+NPAVWSEAWNL GTCFE+PTFQINDYFRLAL+LFWRSDVQKALQE GIEPINGKQYEKSDIE AITKSFG+PALRCNLN+KYL QSQL
Subjt:  LDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPALRCNLNIKYLFQSQL

Query:  AQVVLCFDKCLAHINCPSQYSPALGCPTRILWNKT
        +QV LCFDKCLAHI+CPS+YSPALGCPT+ILWNKT
Subjt:  AQVVLCFDKCLAHINCPSQYSPALGCPTRILWNKT

A0A5A7TE29 Ribonuclease DdI-like1.0e-7966.81Show/hide
Query:  MLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL------------------------------------------------ITSIRKD
        M NLLI  ALNE+EEDI F+E KND HS  DLEGMKEI FDYYQL                                                +TSIRK+
Subjt:  MLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL------------------------------------------------ITSIRKD

Query:  LDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPALRCNLNIKYLFQSQL
        LD+DWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLAL+LFWRSDVQKALQ+FGIEPINGKQYEKS IE AIT+ FG+PALRCNL+ KY  QSQL
Subjt:  LDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPALRCNLNIKYLFQSQL

Query:  AQVVLCFDKCLAHINCPSQYSPALGCPTRILWNKT
        AQVVLCF+KCLA I+CPSQYSPALGCPT+ILW KT
Subjt:  AQVVLCFDKCLAHINCPSQYSPALGCPTRILWNKT

A0A6J1E0X1 ribonuclease MC-like2.0e-1637.5Show/hide
Query:  QLITSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGR-PALRCNL
        ++I +I+  LD+DWP++I   NP  WS  W  HGTC      Q + YF   L ++   D+Q  L ++GI P NG+QY K+ +++AI  + G+ PALRCN 
Subjt:  QLITSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGR-PALRCNL

Query:  NIKYLFQSQLAQVVLCFDK-CLAHINCPSQYSPALGCPTRILWN
        N +     QL ++ LCF K     I+CP      + C    +WN
Subjt:  NIKYLFQSQLAQVVLCFDK-CLAHINCPSQYSPALGCPTRILWN

A0A6J1E266 ribonuclease MC-like3.5e-1639.01Show/hide
Query:  ITSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGR-PALRCNLNI
        I++IR  L+ DWPS+I  +NP +WS  W  HGTC   P+    DYF   L  + + D+  AL +  I P +   Y KS I +AI K   + P LRCN N 
Subjt:  ITSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGR-PALRCNLNI

Query:  KYLFQSQLAQVVLCFDKC-LAHINCPSQYSPALGCPTRILW
         Y  + QL +++LCF K   A I+CPS     + C   + W
Subjt:  KYLFQSQLAQVVLCFDKC-LAHINCPSQYSPALGCPTRILW

A0A6J1JWY7 ribonuclease DdI-like1.1e-5147.93Show/hide
Query:  MAKKKSLFILLCTLMLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL-----------------------------------------
        MA K + F+LL  L+LN+L   A+           + ND  SS +LE MK + FDYYQL                                         
Subjt:  MAKKKSLFILLCTLMLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQL-----------------------------------------

Query:  -------ITSIRKDLDEDWPSL-IISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPA
               I+SIR++ DEDWPSL +I SNPAVW E W+LHGTCFETPTFQI+DYFRLAL+LFW+SDV +AL+++G+EP +G++Y   D E  +  SFG+PA
Subjt:  -------ITSIRKDLDEDWPSL-IISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPA

Query:  LRCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCP
        LRC+ N+KY  Q QLA+V LCFDKCL HINCPSQYS A GCP
Subjt:  LRCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCP

SwissProt top hitse value%identityAlignment
P23540 Ribonuclease MC6.1e-1033.91Show/hide
Query:  ITSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGR-PALRCNLNI
        I+ ++  L+  WP+++ ++N   WS  W  HGTC E+ TF    YF+LA+ +    D+  AL+     P NG+   +  I+  +   FG+ P LRC  + 
Subjt:  ITSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGR-PALRCNLNI

Query:  KYLFQSQLAQVVLCF
        +    S L QVV CF
Subjt:  KYLFQSQLAQVVLCF

Q38716 Ribonuclease S-22.0e-0829.38Show/hide
Query:  DHSSYDLEGMKEISFDYYQLI-TSIRKDLDEDWPSLIISSNPA----VWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQY
        D+ S+ L   ++ S D  ++    + +DL   WP L            W   W  HG C   P +  NDYF  AL L  R++V   L    + P   ++ 
Subjt:  DHSSYDLEGMKEISFDYYQLI-TSIRKDLDEDWPSLIISSNPA----VWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQY

Query:  EKSDIEDAITKSFGRPA-LRCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCP
        + SD+  AITK  G  A L+C        +  L +V++CFD        PS + P + CP
Subjt:  EKSDIEDAITKSFGRPA-LRCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCP

Q40381 Ribonuclease S-74.9e-0729.92Show/hide
Query:  RKDLDEDWPSLIIS-----SNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITK-SFGRPALRCNLN
        + DL + WP L  +      +   W   +N HG C  + ++    YF LA+ L  + D+  +L+  GI P  G +Y    I   I K + G P L C   
Subjt:  RKDLDEDWPSLIIS-----SNPAVWSEAWNLHGTCFETPTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITK-SFGRPALRCNLN

Query:  IKYLFQSQLAQVVLCFDKCLAH-INCP
        I      +L ++ +CFD  + + INCP
Subjt:  IKYLFQSQLAQVVLCFDKCLAH-INCP

Q5AKB1 Ribonuclease T2-like 1-B4.4e-0833.61Show/hide
Query:  WSEAWNLHGTCF----------ETPTFQ-INDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPA-LRCNLN--------IKYLF
        W+  +N HGTCF           TP  Q + D+FR+A+ LF +      L E GI P N K Y  S+I+ A+   FG    ++C+ N          ++ 
Subjt:  WSEAWNLHGTCF----------ETPTFQ-INDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPA-LRCNLN--------IKYLF

Query:  QSQLAQVVLCFDKCLAHINCPS
         S L    L  D  +AH NCPS
Subjt:  QSQLAQVVLCFDKCLAHINCPS

Q6CRT6 Ribonuclease T2-like2.7e-0529.59Show/hide
Query:  TSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFET---------------PTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAI
        T + + +D  W S     + ++W   +N HGTC  T                   + DYFR+A+ LF   D  + L+  GIEP   K Y K +I +A+
Subjt:  TSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFET---------------PTFQINDYFRLALHLFWRSDVQKALQEFGIEPINGKQYEKSDIEDAI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGAAGAAAAGTTTATTTATTCTCCTATGCACTTTGATGTTAAATCTTTTAATTGTGGTTGCCTTGAATGAGGTAGAAGAGGACATAGCTTTCATGGAATCCAA
AAATGATGATCATAGTTCCTATGATTTGGAGGGGATGAAAGAAATTTCATTTGATTATTATCAACTTATCACTAGCATAAGAAAAGATTTAGACGAGGATTGGCCGAGTT
TAATAATAAGTTCAAACCCAGCAGTATGGAGTGAAGCATGGAATTTACATGGCACATGCTTTGAAACTCCAACATTCCAAATCAATGACTATTTCCGATTAGCATTACAC
CTTTTTTGGAGAAGTGATGTGCAAAAAGCACTTCAAGAATTTGGGATTGAACCAATAAATGGAAAGCAATATGAGAAGTCCGACATTGAAGACGCCATAACCAAAAGCTT
TGGGAGGCCAGCATTGCGTTGCAACTTGAACATAAAGTACTTATTTCAGTCTCAATTGGCACAAGTGGTTCTTTGCTTTGATAAATGTCTTGCTCATATCAATTGTCCTT
CTCAATATTCTCCTGCCCTTGGTTGTCCTACAAGGATCCTTTGGAACAAAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGAAGAAAAGTTTATTTATTCTCCTATGCACTTTGATGTTAAATCTTTTAATTGTGGTTGCCTTGAATGAGGTAGAAGAGGACATAGCTTTCATGGAATCCAA
AAATGATGATCATAGTTCCTATGATTTGGAGGGGATGAAAGAAATTTCATTTGATTATTATCAACTTATCACTAGCATAAGAAAAGATTTAGACGAGGATTGGCCGAGTT
TAATAATAAGTTCAAACCCAGCAGTATGGAGTGAAGCATGGAATTTACATGGCACATGCTTTGAAACTCCAACATTCCAAATCAATGACTATTTCCGATTAGCATTACAC
CTTTTTTGGAGAAGTGATGTGCAAAAAGCACTTCAAGAATTTGGGATTGAACCAATAAATGGAAAGCAATATGAGAAGTCCGACATTGAAGACGCCATAACCAAAAGCTT
TGGGAGGCCAGCATTGCGTTGCAACTTGAACATAAAGTACTTATTTCAGTCTCAATTGGCACAAGTGGTTCTTTGCTTTGATAAATGTCTTGCTCATATCAATTGTCCTT
CTCAATATTCTCCTGCCCTTGGTTGTCCTACAAGGATCCTTTGGAACAAAACATAG
Protein sequenceShow/hide protein sequence
MAKKKSLFILLCTLMLNLLIVVALNEVEEDIAFMESKNDDHSSYDLEGMKEISFDYYQLITSIRKDLDEDWPSLIISSNPAVWSEAWNLHGTCFETPTFQINDYFRLALH
LFWRSDVQKALQEFGIEPINGKQYEKSDIEDAITKSFGRPALRCNLNIKYLFQSQLAQVVLCFDKCLAHINCPSQYSPALGCPTRILWNKT