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PI0009246 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009246
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationchr07:12874002..12874602
RNA-Seq ExpressionPI0009246
SyntenyPI0009246
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]2.9e-3155.7Show/hide
Query:  MDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADF--------MRVNDQKVTFNVDNPLKFPEDVKNC
        MDLGR + DLGASI L+ LSIFKKL I EVQPT +RLQ  DR I  PEGKIED+LVK    I  A          M  ND+++ FN    +KFP +    
Subjt:  MDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADF--------MRVNDQKVTFNVDNPLKFPEDVKNC

Query:  NAIESLIWDYCKEEVIVELFSLEVFI-EEDPKGVLEIVNNVSDARKFEPLDLQTKGVK
        NAIESL WDYCKEE   ELFS E F  EEDP  +LE VN +    KFE LDL+TKG K
Subjt:  NAIESLIWDYCKEEVIVELFSLEVFI-EEDPKGVLEIVNNVSDARKFEPLDLQTKGVK

TYK25836.1 uncharacterized protein E5676_scaffold436G00440 [Cucumis melo var. makuwa]2.2e-3149.33Show/hide
Query:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADFM--------RVNDQKVTF
        M D   FT+PC IG MDL R +C+LG SI L+ LSIFKKL I  VQPT + LQ  DR I  P+GK ED+LVK+DKF+F  DF+         VND++V F
Subjt:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADFM--------RVNDQKVTF

Query:  NVDNPLKFPEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEEDPKGVLE
        ++ N +KFP D +NCNAI+S  WDY +EE++       VF+E   +G ++
Subjt:  NVDNPLKFPEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEEDPKGVLE

XP_030477929.1 uncharacterized protein LOC115694963 [Cannabis sativa]2.9e-3145.29Show/hide
Query:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADF------------------
        + DPG FT+PC IG  D+GR +CDLGASI L+ +SIFKKLGIGE +PT+V LQ ADR + HPEGKIED+LV++DKFIF ADF                  
Subjt:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADF------------------

Query:  -----------------MRVNDQKVTFNVDNPLKFPEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEE
                         MRVNDQKVTFNV N ++FP++++ C+ I  +      + ++ E F  E + +E
Subjt:  -----------------MRVNDQKVTFNVDNPLKFPEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEE

XP_030502183.1 uncharacterized protein LOC115717351 [Cannabis sativa]3.5e-3241.23Show/hide
Query:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADF------------------
        + DPG FT+PC IG  D+GR +CDLGASI L+ +SIFKKLGIGE +PT+V LQ ADR + HPEGKIED+LV++DKFIF ADF                  
Subjt:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADF------------------

Query:  -----------------MRVNDQKVTFNVDNPLKFPEDVKNCNAI--------ESLIWDYCKEEVIVELFSLEVFIEEDPKGVLEIVNNVSDARK----F
                         MRVNDQKVTFNV N ++FP++++ C+ I        E    + CK+E  +  F     + ED    +  V  +    K    F
Subjt:  -----------------MRVNDQKVTFNVDNPLKFPEDVKNCNAI--------ESLIWDYCKEEVIVELFSLEVFIEEDPKGVLEIVNNVSDARK----F

Query:  EPLDLQTKGVK
        E L+L+    K
Subjt:  EPLDLQTKGVK

XP_030504924.1 uncharacterized protein LOC115719886 [Cannabis sativa]2.9e-3145.29Show/hide
Query:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADF------------------
        + DPG FT+PC IG  D+GR +CDLGASI L+ +SIFKKLGIGE +PT+V LQ ADR + HPEGKIED+LV++DKFIF ADF                  
Subjt:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADF------------------

Query:  -----------------MRVNDQKVTFNVDNPLKFPEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEE
                         MRVNDQKVTFNV N ++FP++++ C+ I  +      + ++ E F  E + +E
Subjt:  -----------------MRVNDQKVTFNVDNPLKFPEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEE

TrEMBL top hitse value%identityAlignment
A0A5A7UE99 Uncharacterized protein1.4e-3155.7Show/hide
Query:  MDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADF--------MRVNDQKVTFNVDNPLKFPEDVKNC
        MDLGR + DLGASI L+ LSIFKKL I EVQPT +RLQ  DR I  PEGKIED+LVK    I  A          M  ND+++ FN    +KFP +    
Subjt:  MDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADF--------MRVNDQKVTFNVDNPLKFPEDVKNC

Query:  NAIESLIWDYCKEEVIVELFSLEVFI-EEDPKGVLEIVNNVSDARKFEPLDLQTKGVK
        NAIESL WDYCKEE   ELFS E F  EEDP  +LE VN +    KFE LDL+TKG K
Subjt:  NAIESLIWDYCKEEVIVELFSLEVFI-EEDPKGVLEIVNNVSDARKFEPLDLQTKGVK

A0A5A7UF79 Uncharacterized protein1.7e-2949.09Show/hide
Query:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADFMRVNDQKVTFNVDNPLKF
        MT+P  FTVPC IG+MDLGR +C+L  SI L+ LSIFKKL I EVQPT +RL  AD+FI  PE KI+D                               F
Subjt:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADFMRVNDQKVTFNVDNPLKF

Query:  PEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEE-DPKGVLEIVNNVSDARKFEPLDLQTKGVK
        P D +NCN IE L W+Y ++E   ELFS E F EE DP  +L+ VN VS  +KFE LDLQ KG K
Subjt:  PEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEE-DPKGVLEIVNNVSDARKFEPLDLQTKGVK

A0A5A7VHV2 Uncharacterized protein1.6e-3050.61Show/hide
Query:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADFMRVNDQKVTFNVDNPLKF
        MT+ G FT+PC IG MDLGR +CDL ASI L  L +FK LGIG+V+PT+V L   D  IV P+G+IE+ LVK+DKFIF  +F+ ++     +  D     
Subjt:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADFMRVNDQKVTFNVDNPLKF

Query:  PEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEEDPKGVLEIVNNVSDARKFEPLDLQTKGVK
                          +EEVIVELFS E FI+E PK +LE VN VSD RKFEPL+LQ KG K
Subjt:  PEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEEDPKGVLEIVNNVSDARKFEPLDLQTKGVK

A0A5D3BZI6 Uncharacterized protein4.1e-3151.22Show/hide
Query:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADFMRVNDQKVTFNVDNPLKF
        MT+ G FT+PC IG MDLGR +CDL ASI L  L +FK LGIG+V+PT+V L   D  IV P+G+IE+ LVK+DKFIF  DF+ ++     +  D     
Subjt:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADFMRVNDQKVTFNVDNPLKF

Query:  PEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEEDPKGVLEIVNNVSDARKFEPLDLQTKGVK
                          +EEVIVELFS E FI+E PK +LE VN VSD RKFEPL+LQ KG K
Subjt:  PEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEEDPKGVLEIVNNVSDARKFEPLDLQTKGVK

A0A5D3DQ91 RT_RNaseH_2 domain-containing protein1.1e-3149.33Show/hide
Query:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADFM--------RVNDQKVTF
        M D   FT+PC IG MDL R +C+LG SI L+ LSIFKKL I  VQPT + LQ  DR I  P+GK ED+LVK+DKF+F  DF+         VND++V F
Subjt:  MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADFM--------RVNDQKVTF

Query:  NVDNPLKFPEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEEDPKGVLE
        ++ N +KFP D +NCNAI+S  WDY +EE++       VF+E   +G ++
Subjt:  NVDNPLKFPEDVKNCNAIESLIWDYCKEEVIVELFSLEVFIEEDPKGVLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGATCCTGGATGCTTCACTGTGCCCTGCTGTATAGGCGACATGGATCTTGGTCGCATGATATGCGACCTTGGAGCCAGTATCACTTTGATATCACTTTCTATCTT
TAAGAAATTGGGGATAGGAGAGGTTCAACCAACATCAGTAAGACTCCAGTCGGCGGACAGATTCATTGTGCATCCTGAAGGTAAGATTGAAGACATTTTAGTGAAGCTGG
ACAAGTTTATATTCACCGCAGACTTCATGCGAGTTAATGACCAAAAAGTCACCTTCAACGTTGATAACCCATTGAAATTCCCCGAAGATGTTAAGAATTGTAATGCAATT
GAATCCCTCATATGGGATTATTGCAAGGAAGAAGTCATTGTCGAGTTATTCAGCCTGGAAGTATTCATTGAAGAGGACCCTAAAGGCGTTTTAGAAATAGTGAATAACGT
GTCTGACGCAAGGAAGTTCGAGCCTTTGGATCTGCAAACTAAAGGTGTTAAGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGATCCTGGATGCTTCACTGTGCCCTGCTGTATAGGCGACATGGATCTTGGTCGCATGATATGCGACCTTGGAGCCAGTATCACTTTGATATCACTTTCTATCTT
TAAGAAATTGGGGATAGGAGAGGTTCAACCAACATCAGTAAGACTCCAGTCGGCGGACAGATTCATTGTGCATCCTGAAGGTAAGATTGAAGACATTTTAGTGAAGCTGG
ACAAGTTTATATTCACCGCAGACTTCATGCGAGTTAATGACCAAAAAGTCACCTTCAACGTTGATAACCCATTGAAATTCCCCGAAGATGTTAAGAATTGTAATGCAATT
GAATCCCTCATATGGGATTATTGCAAGGAAGAAGTCATTGTCGAGTTATTCAGCCTGGAAGTATTCATTGAAGAGGACCCTAAAGGCGTTTTAGAAATAGTGAATAACGT
GTCTGACGCAAGGAAGTTCGAGCCTTTGGATCTGCAAACTAAAGGTGTTAAGACATAA
Protein sequenceShow/hide protein sequence
MTDPGCFTVPCCIGDMDLGRMICDLGASITLISLSIFKKLGIGEVQPTSVRLQSADRFIVHPEGKIEDILVKLDKFIFTADFMRVNDQKVTFNVDNPLKFPEDVKNCNAI
ESLIWDYCKEEVIVELFSLEVFIEEDPKGVLEIVNNVSDARKFEPLDLQTKGVKT