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PI0009264 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009264
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionIntegrase, catalytic core
Genome locationchr12:12657677..12657946
RNA-Seq ExpressionPI0009264
SyntenyPI0009264
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033603.1 Integrase, catalytic core [Cucumis melo var. makuwa]7.1e-2471.91Show/hide
Query:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL
        MI+ RSN+NQV+L+NVFYVLEMKKNL  VSQLTS  N  VF  +NVKVY NLKVSGT LME +RMDSIYVM  E TY+NK +KNET DL
Subjt:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL

KAA0037684.1 Integrase, catalytic core [Cucumis melo var. makuwa]1.5e-2168.54Show/hide
Query:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL
        MI+ RSN NQV+L+NVFYV  MKKNL  +SQLTSVGN  VF  ++VKVY N KVSGT L+E +RMD IYVM  E  YVNKTRKNET DL
Subjt:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL

KAA0037956.1 glutamate receptor 2.8-like [Cucumis melo var. makuwa]1.5e-2166.29Show/hide
Query:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL
        MI+ RSN+NQV+L+NVFYV  MKKNL LVSQLT +GN  VF  D+VKVY NLKVSGT LME +R++SIY++  E  Y+NKTRKN+T DL
Subjt:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL

KAA0046986.1 Integrase, catalytic core [Cucumis melo var. makuwa]2.1e-2371.91Show/hide
Query:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL
        MI+ RSN+NQV+L+NVFYV  MKKNL  VSQLTS GN  VF  D+VKVY NLKVSGT LME +RMDSIYVM  E  YVNKTRKN+T DL
Subjt:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL

TYK22269.1 Integrase, catalytic core [Cucumis melo var. makuwa]3.0e-2269.66Show/hide
Query:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL
        M + R N+NQV+L+NVFYVLEMKKNL  VSQLTS  N  VF  +NVKVY NLKVSGT LME +RMDSIYVM  E TY+NKT+KNET  L
Subjt:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL

TrEMBL top hitse value%identityAlignment
A0A5A7ST06 Integrase, catalytic core3.4e-2471.91Show/hide
Query:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL
        MI+ RSN+NQV+L+NVFYVLEMKKNL  VSQLTS  N  VF  +NVKVY NLKVSGT LME +RMDSIYVM  E TY+NK +KNET DL
Subjt:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL

A0A5A7T2J1 Integrase, catalytic core7.2e-2268.54Show/hide
Query:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL
        MI+ RSN NQV+L+NVFYV  MKKNL  +SQLTSVGN  VF  ++VKVY N KVSGT L+E +RMD IYVM  E  YVNKTRKNET DL
Subjt:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL

A0A5A7T6Z1 Glutamate receptor 2.8-like7.2e-2266.29Show/hide
Query:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL
        MI+ RSN+NQV+L+NVFYV  MKKNL LVSQLT +GN  VF  D+VKVY NLKVSGT LME +R++SIY++  E  Y+NKTRKN+T DL
Subjt:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL

A0A5A7TYD2 Integrase, catalytic core1.0e-2371.91Show/hide
Query:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL
        MI+ RSN+NQV+L+NVFYV  MKKNL  VSQLTS GN  VF  D+VKVY NLKVSGT LME +RMDSIYVM  E  YVNKTRKN+T DL
Subjt:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL

A0A5D3DG87 Integrase, catalytic core1.4e-2269.66Show/hide
Query:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL
        M + R N+NQV+L+NVFYVLEMKKNL  VSQLTS  N  VF  +NVKVY NLKVSGT LME +RMDSIYVM  E TY+NKT+KNET  L
Subjt:  MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATGTCTCGATCCAATGCCAATCAAGTGCAACTGAATAATGTATTTTATGTGCTTGAAATGAAGAAGAATTTGGGGTTAGTATCTCAATTGACATCAGTAGGCAA
CGTCCCTGTGTTTCGACATGACAATGTCAAGGTGTATCCTAATCTCAAAGTTAGTGGTACATCGTTGATGGAAAGACAAAGGATGGACTCCATCTATGTTATGTTAACAG
AAGCCACATATGTAAACAAGACACGAAAGAATGAAACAACAGATTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATAATGTCTCGATCCAATGCCAATCAAGTGCAACTGAATAATGTATTTTATGTGCTTGAAATGAAGAAGAATTTGGGGTTAGTATCTCAATTGACATCAGTAGGCAA
CGTCCCTGTGTTTCGACATGACAATGTCAAGGTGTATCCTAATCTCAAAGTTAGTGGTACATCGTTGATGGAAAGACAAAGGATGGACTCCATCTATGTTATGTTAACAG
AAGCCACATATGTAAACAAGACACGAAAGAATGAAACAACAGATTTATGA
Protein sequenceShow/hide protein sequence
MIMSRSNANQVQLNNVFYVLEMKKNLGLVSQLTSVGNVPVFRHDNVKVYPNLKVSGTSLMERQRMDSIYVMLTEATYVNKTRKNETTDL