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PI0009282 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009282
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:16370773..16371507
RNA-Seq ExpressionPI0009282
SyntenyPI0009282
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036791.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-3749.7Show/hide
Query:  MELVSSDGWRSDNGTFRPGY----------------------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVP
        +ELV+  GWR DN TFRPGY                             +    V+SHPAAKGLLNK F HYD+L YVFG+DR+TGGR ++F D+GSN P
Subjt:  MELVSSDGWRSDNGTFRPGY----------------------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVP

Query:  LGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAME
         G++ F+A    D +FP+MYSQGL+MSPDD+MGT+  R+ E R  SS SKRKR GHA+++  I+R+A+E
Subjt:  LGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAME

KAA0041291.1 retrotransposon protein [Cucumis melo var. makuwa]1.0e-3649.13Show/hide
Query:  MELVSSDGWRSDNGTFRPGY---------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVPLGFEGFSAYDGND
        +ELV+  GWRSDNGTF PGY                +    V+SHPAAKGLLNK F HYD+L YVFG+DRAT GRA++F + GSN   G++ F A    D
Subjt:  MELVSSDGWRSDNGTFRPGY---------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVPLGFEGFSAYDGND

Query:  MEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAMELNGLKPLRSRINSHNLF
        M+FP MYSQGL+MS DD+MGT++ R+ E R  SS SK+KR GHA ++ +I+R+A+E   ++ L   ++    F
Subjt:  MEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAMELNGLKPLRSRINSHNLF

KAA0048280.1 retrotransposon protein [Cucumis melo var. makuwa]2.4e-3850.59Show/hide
Query:  MELVSSDGWRSDNGTFRPGY-----------------------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNV
        +ELV++ GWRSDNGTF PGY                              +    V+SHPAAKGLLNK F HYD+L YVFG+DRATGGRA++F D+GSN 
Subjt:  MELVSSDGWRSDNGTFRPGY-----------------------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNV

Query:  PLGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAME
        P G++ F+A D +D +F  MYS GL+MSPDD+M T++ R+ E R  SS SKRKR GHA ++ +I+R+AME
Subjt:  PLGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAME

KAA0054147.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-3750.59Show/hide
Query:  MELVSSDGWRSDNGTFRPGY-----------------------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNV
        +ELV+  GWRSDNGTFRPGY                              +    V+SHPAAKGLLNK F HYD+L YVFG+DRATGGRA++F D+GSN 
Subjt:  MELVSSDGWRSDNGTFRPGY-----------------------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNV

Query:  PLGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAME
        P G++ F+A    D++FP MYS GL+MSPDD+M T++ R+ E R  SS SKRKR GHA ++ +I+R+A+E
Subjt:  PLGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAME

TYK02751.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.0e-3649.13Show/hide
Query:  MELVSSDGWRSDNGTFRPGY---------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVPLGFEGFSAYDGND
        +ELV+  GWRSDNGTF PGY                +    V+SHPAAKGLLNK F HYD+L YVFG+DRAT GRA++F + GSN   G++ F A    D
Subjt:  MELVSSDGWRSDNGTFRPGY---------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVPLGFEGFSAYDGND

Query:  MEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAMELNGLKPLRSRINSHNLF
        M+FP MYSQGL+MS DD+MGT++ R+ E R  SS SK+KR GHA ++ +I+R+A+E   ++ L   ++    F
Subjt:  MEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAMELNGLKPLRSRINSHNLF

TrEMBL top hitse value%identityAlignment
A0A5A7TI01 Retrotransposon protein4.8e-3749.13Show/hide
Query:  MELVSSDGWRSDNGTFRPGY---------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVPLGFEGFSAYDGND
        +ELV+  GWRSDNGTF PGY                +    V+SHPAAKGLLNK F HYD+L YVFG+DRAT GRA++F + GSN   G++ F A    D
Subjt:  MELVSSDGWRSDNGTFRPGY---------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVPLGFEGFSAYDGND

Query:  MEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAMELNGLKPLRSRINSHNLF
        M+FP MYSQGL+MS DD+MGT++ R+ E R  SS SK+KR GHA ++ +I+R+A+E   ++ L   ++    F
Subjt:  MEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAMELNGLKPLRSRINSHNLF

A0A5A7TYQ6 Retrotransposon protein1.2e-3850.59Show/hide
Query:  MELVSSDGWRSDNGTFRPGY-----------------------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNV
        +ELV++ GWRSDNGTF PGY                              +    V+SHPAAKGLLNK F HYD+L YVFG+DRATGGRA++F D+GSN 
Subjt:  MELVSSDGWRSDNGTFRPGY-----------------------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNV

Query:  PLGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAME
        P G++ F+A D +D +F  MYS GL+MSPDD+M T++ R+ E R  SS SKRKR GHA ++ +I+R+AME
Subjt:  PLGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAME

A0A5A7UHV9 Retrotransposon protein5.7e-3850.59Show/hide
Query:  MELVSSDGWRSDNGTFRPGY-----------------------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNV
        +ELV+  GWRSDNGTFRPGY                              +    V+SHPAAKGLLNK F HYD+L YVFG+DRATGGRA++F D+GSN 
Subjt:  MELVSSDGWRSDNGTFRPGY-----------------------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNV

Query:  PLGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAME
        P G++ F+A    D++FP MYS GL+MSPDD+M T++ R+ E R  SS SKRKR GHA ++ +I+R+A+E
Subjt:  PLGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAME

A0A5D3BC43 Retrotransposon protein9.8e-3849.7Show/hide
Query:  MELVSSDGWRSDNGTFRPGY----------------------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVP
        +ELV+  GWR DN TFRPGY                             +    V+SHPAAKGLLNK F HYD+L YVFG+DR+TGGR ++F D+GSN P
Subjt:  MELVSSDGWRSDNGTFRPGY----------------------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVP

Query:  LGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAME
         G++ F+A    D +FP+MYSQGL+MSPDD+MGT+  R+ E R  SS SKRKR GHA+++  I+R+A+E
Subjt:  LGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAME

A0A5D3BSN2 Putative nuclease HARBI14.8e-3749.13Show/hide
Query:  MELVSSDGWRSDNGTFRPGY---------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVPLGFEGFSAYDGND
        +ELV+  GWRSDNGTF PGY                +    V+SHPAAKGLLNK F HYD+L YVFG+DRAT GRA++F + GSN   G++ F A    D
Subjt:  MELVSSDGWRSDNGTFRPGY---------------HITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVPLGFEGFSAYDGND

Query:  MEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAMELNGLKPLRSRINSHNLF
        M+FP MYSQGL+MS DD+MGT++ R+ E R  SS SK+KR GHA ++ +I+R+A+E   ++ L   ++    F
Subjt:  MEFPTMYSQGLDMSPDDIMGTQSGRLFEARASSSSSKRKRGGHALEAAEIIRSAMELNGLKPLRSRINSHNLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGGTATCATCTGATGGGTGGAGGTCGGATAACGGGACGTTTAGACCCGGGTACCATATTACTACAACCCTTGTACAGAGTCATCCAGCCGCAAAGGGTCTCCT
AAACAAACCCTTTCCTCATTACGACGACCTTTGCTACGTCTTCGGAAGAGATCGTGCAACAGGAGGTCGAGCTAAAACCTTTGGCGATGTTGGGTCGAACGTGCCTCTAG
GATTCGAAGGATTTTCCGCGTATGACGGGAACGATATGGAGTTCCCAACGATGTACAGTCAAGGACTGGACATGTCACCAGACGATATAATGGGTACACAATCCGGTCGG
TTGTTTGAGGCTAGGGCTAGTTCGAGCAGTTCGAAGAGGAAACGGGGAGGGCATGCATTAGAGGCGGCAGAAATTATTCGCAGTGCCATGGAATTGAACGGATTGAAGCC
CTTACGTAGCAGAATAAATTCACATAATCTTTTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGGTATCATCTGATGGGTGGAGGTCGGATAACGGGACGTTTAGACCCGGGTACCATATTACTACAACCCTTGTACAGAGTCATCCAGCCGCAAAGGGTCTCCT
AAACAAACCCTTTCCTCATTACGACGACCTTTGCTACGTCTTCGGAAGAGATCGTGCAACAGGAGGTCGAGCTAAAACCTTTGGCGATGTTGGGTCGAACGTGCCTCTAG
GATTCGAAGGATTTTCCGCGTATGACGGGAACGATATGGAGTTCCCAACGATGTACAGTCAAGGACTGGACATGTCACCAGACGATATAATGGGTACACAATCCGGTCGG
TTGTTTGAGGCTAGGGCTAGTTCGAGCAGTTCGAAGAGGAAACGGGGAGGGCATGCATTAGAGGCGGCAGAAATTATTCGCAGTGCCATGGAATTGAACGGATTGAAGCC
CTTACGTAGCAGAATAAATTCACATAATCTTTTTCAATAA
Protein sequenceShow/hide protein sequence
MELVSSDGWRSDNGTFRPGYHITTTLVQSHPAAKGLLNKPFPHYDDLCYVFGRDRATGGRAKTFGDVGSNVPLGFEGFSAYDGNDMEFPTMYSQGLDMSPDDIMGTQSGR
LFEARASSSSSKRKRGGHALEAAEIIRSAMELNGLKPLRSRINSHNLFQ