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PI0009283 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009283
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr10:7599014..7600190
RNA-Seq ExpressionPI0009283
SyntenyPI0009283
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031722.1 uncharacterized protein E6C27_scaffold139G005100 [Cucumis melo var. makuwa]4.8e-4168.15Show/hide
Query:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIE--AKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDF
        MLYL+EV D +R+LES++EEI +K + IDAVTGR++G P+ EL+TRVD +E      R  NYERGDSSTGSVAHIEERV ELD+SQK+++EMING+SEDF
Subjt:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIE--AKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDF

Query:  RAALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI
        RA LDV+R EIADV+ ++NLTMRA+ANQAP GGAI
Subjt:  RAALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI

KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]6.3e-4168.15Show/hide
Query:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIE--AKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDF
        MLYL+EV D +R+LES++EEISEK + IDAV GR++G P+ EL+TRVD +E      R  NYERGDSSTGSVAHIEERV ELD+SQK+++EMING+SEDF
Subjt:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIE--AKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDF

Query:  RAALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI
        RA LDV+R EIADV+ +++LTMRA+ANQAP GGAI
Subjt:  RAALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI

KAA0053838.1 uncharacterized protein E6C27_scaffold135G002280 [Cucumis melo var. makuwa]3.7e-4167.67Show/hide
Query:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRA
        MLYL+EV D VR+LES+++EISEK D I+AV GR++GL + ELL RVDT+EA   R  NYE GDSS+G VAH+E RV ELDNSQK+++EMING+SEDFRA
Subjt:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRA

Query:  ALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI
         LDV+R EIADV+T+++LTMRA+ANQAP+GGA+
Subjt:  ALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI

KAA0066681.1 uncharacterized protein E6C27_scaffold271G00090 [Cucumis melo var. makuwa]2.5e-4270.68Show/hide
Query:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRA
        MLYL+EV D +RFLES++EEI+EK D IDAV GR++GLP+ ELL RVDT+E    R G++ERGDSSTGSVAHIEERV ELD+SQK+++EMING SEDFRA
Subjt:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRA

Query:  ALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI
         LDVIR EIA V+ +++LTMRA+ANQAP GGAI
Subjt:  ALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI

TYK25562.1 uncharacterized protein E5676_scaffold352G007160 [Cucumis melo var. makuwa]3.7e-4167.67Show/hide
Query:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRA
        MLYL+EV D VR+LES+++EISEK D I+AV GR++GL + ELL RVDT+EA   R  NYE GDSS+G VAH+E RV ELDNSQK+++EMING+SEDFRA
Subjt:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRA

Query:  ALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI
         LDV+R EIADV+T+++LTMRA+ANQAP+GGA+
Subjt:  ALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI

TrEMBL top hitse value%identityAlignment
A0A5A7SKW3 Retrotrans_gag domain-containing protein2.3e-4168.15Show/hide
Query:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIE--AKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDF
        MLYL+EV D +R+LES++EEI +K + IDAVTGR++G P+ EL+TRVD +E      R  NYERGDSSTGSVAHIEERV ELD+SQK+++EMING+SEDF
Subjt:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIE--AKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDF

Query:  RAALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI
        RA LDV+R EIADV+ ++NLTMRA+ANQAP GGAI
Subjt:  RAALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI

A0A5A7UFG2 Retrotrans_gag domain-containing protein1.8e-4167.67Show/hide
Query:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRA
        MLYL+EV D VR+LES+++EISEK D I+AV GR++GL + ELL RVDT+EA   R  NYE GDSS+G VAH+E RV ELDNSQK+++EMING+SEDFRA
Subjt:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRA

Query:  ALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI
         LDV+R EIADV+T+++LTMRA+ANQAP+GGA+
Subjt:  ALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI

A0A5D3C4R1 Reverse transcriptase3.0e-4168.15Show/hide
Query:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIE--AKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDF
        MLYL+EV D +R+LES++EEISEK + IDAV GR++G P+ EL+TRVD +E      R  NYERGDSSTGSVAHIEERV ELD+SQK+++EMING+SEDF
Subjt:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIE--AKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDF

Query:  RAALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI
        RA LDV+R EIADV+ +++LTMRA+ANQAP GGAI
Subjt:  RAALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI

A0A5D3DPU9 Retrotrans_gag domain-containing protein1.8e-4167.67Show/hide
Query:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRA
        MLYL+EV D VR+LES+++EISEK D I+AV GR++GL + ELL RVDT+EA   R  NYE GDSS+G VAH+E RV ELDNSQK+++EMING+SEDFRA
Subjt:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRA

Query:  ALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI
         LDV+R EIADV+T+++LTMRA+ANQAP+GGA+
Subjt:  ALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI

A0A5D3DVV7 Retrotrans_gag domain-containing protein1.2e-4270.68Show/hide
Query:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRA
        MLYL+EV D +RFLES++EEI+EK D IDAV GR++GLP+ ELL RVDT+E    R G++ERGDSSTGSVAHIEERV ELD+SQK+++EMING SEDFRA
Subjt:  MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRA

Query:  ALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI
         LDVIR EIA V+ +++LTMRA+ANQAP GGAI
Subjt:  ALDVIRKEIADVSTKVNLTMRAIANQAPIGGAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTACCTGATGGAAGTTTTGGATGTCGTCCGCTTTTTGGAAAGTCAAATTGAAGAAATTTCTGAGAAAGCTGACGCTATTGATGCGGTAACCGGTCGCCTCGACGG
ATTACCTATGAATGAGTTGTTGACAAGAGTTGACACTATAGAGGCAAAAACTGCAAGACCTGGTAACTACGAGCGTGGGGACAGTTCAACAGGCTCTGTTGCCCACATAG
AAGAACGGGTTGGAGAGCTAGATAACTCCCAAAAGTCGATTGTTGAGATGATAAACGGCATATCAGAGGATTTTCGTGCCGCTCTTGACGTCATCAGGAAGGAGATCGCA
GACGTGAGCACGAAGGTGAACCTCACGATGCGAGCCATAGCAAACCAAGCTCCAATTGGAGGAGCAATACAAGCTTTAAACCATAGGCGAAGACAAAGCTATACGAACAG
AGGGTCCAAGAACTCTCGTCGGCATACGCAGCGGAAAAACGACTATTTGACTTGTCCAATGACTCTCAAGATGCGAGACGTCATCCAAGTTCCTCATCTGGAGGAAACAA
GAATAATCGTGCGAGTTCTCCAAAGGTCGGATGGGGAGATAAATGATCTAGTGGTGATCGCAGGCCCTTTCAACCAAACACCGGGAACACGAGGCAAGGACAGAACCCCC
AAAATTCTCACAACCATCCCGCTGTCTGTTTCATATGAAAAGGATCGCACATGGCAAGAGAATGTCCGAACCGAACCGTCTTCAATGTCTTTCAGGCCGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTACCTGATGGAAGTTTTGGATGTCGTCCGCTTTTTGGAAAGTCAAATTGAAGAAATTTCTGAGAAAGCTGACGCTATTGATGCGGTAACCGGTCGCCTCGACGG
ATTACCTATGAATGAGTTGTTGACAAGAGTTGACACTATAGAGGCAAAAACTGCAAGACCTGGTAACTACGAGCGTGGGGACAGTTCAACAGGCTCTGTTGCCCACATAG
AAGAACGGGTTGGAGAGCTAGATAACTCCCAAAAGTCGATTGTTGAGATGATAAACGGCATATCAGAGGATTTTCGTGCCGCTCTTGACGTCATCAGGAAGGAGATCGCA
GACGTGAGCACGAAGGTGAACCTCACGATGCGAGCCATAGCAAACCAAGCTCCAATTGGAGGAGCAATACAAGCTTTAAACCATAGGCGAAGACAAAGCTATACGAACAG
AGGGTCCAAGAACTCTCGTCGGCATACGCAGCGGAAAAACGACTATTTGACTTGTCCAATGACTCTCAAGATGCGAGACGTCATCCAAGTTCCTCATCTGGAGGAAACAA
GAATAATCGTGCGAGTTCTCCAAAGGTCGGATGGGGAGATAAATGATCTAGTGGTGATCGCAGGCCCTTTCAACCAAACACCGGGAACACGAGGCAAGGACAGAACCCCC
AAAATTCTCACAACCATCCCGCTGTCTGTTTCATATGAAAAGGATCGCACATGGCAAGAGAATGTCCGAACCGAACCGTCTTCAATGTCTTTCAGGCCGCCTTAG
Protein sequenceShow/hide protein sequence
MLYLMEVLDVVRFLESQIEEISEKADAIDAVTGRLDGLPMNELLTRVDTIEAKTARPGNYERGDSSTGSVAHIEERVGELDNSQKSIVEMINGISEDFRAALDVIRKEIA
DVSTKVNLTMRAIANQAPIGGAIQALNHRRRQSYTNRGSKNSRRHTQRKNDYLTCPMTLKMRDVIQVPHLEETRIIVRVLQRSDGEINDLVVIAGPFNQTPGTRGKDRTP
KILTTIPLSVSYEKDRTWQENVRTEPSSMSFRPP