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PI0009287 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009287
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr12:8504633..8505016
RNA-Seq ExpressionPI0009287
SyntenyPI0009287
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032368.1 gag-pol polyprotein [Cucumis melo var. makuwa]2.9e-3966.14Show/hide
Query:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC
        M++I+EG STTRP VLDG+NYAYWKARM AF KSID++TWKAV+  W+ PT+T  D K T K E  WT+ ED+ASLGNSRALN I+N  DQNVFKLIN C
Subjt:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC

Query:  VSTKEAWGILEVAYEGTLKLRCHVCKL
         S KEAW ILEVAYEGT K++  + +L
Subjt:  VSTKEAWGILEVAYEGTLKLRCHVCKL

KAA0035422.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]1.3e-3964.46Show/hide
Query:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC
        +D +REGSSTTRP VLDG NYAYWKAR++AF KSIDS+ WKA++ G +HP+  D  GK TLK E++W+  +DEA+ GNSRALN IFN VDQN+FK IN C
Subjt:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC

Query:  VSTKEAWGILEVAYEGTLKLR
        +  KEAW ILE AYEGT K++
Subjt:  VSTKEAWGILEVAYEGTLKLR

KAA0065486.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]9.4e-3862.81Show/hide
Query:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC
        MD IREG+STTRP +LDG NY YWK+RM+AF  S+D R+WKA++ GW+HPT  D  GKVT K EL W + ED+A++GNSRALN +FN VDQN+FKLIN  
Subjt:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC

Query:  VSTKEAWGILEVAYEGTLKLR
           K AW ILEVAYEGT  ++
Subjt:  VSTKEAWGILEVAYEGTLKLR

TYJ98064.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]8.5e-3959.5Show/hide
Query:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC
        MD +REG+STT+P +LDG NY YWKA+M+AF KS+DSR+WK+V+ GW+ P++ DA G +TLKP++ W   EDE S GNS+ LN + N VDQNV KLIN C
Subjt:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC

Query:  VSTKEAWGILEVAYEGTLKLR
         S K+ W ILEVAY+G  KL+
Subjt:  VSTKEAWGILEVAYEGTLKLR

XP_008464095.1 PREDICTED: uncharacterized protein LOC103502061 [Cucumis melo]1.3e-3964.46Show/hide
Query:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC
        +D +REGSSTTRP VLDG NYAYWKAR++AF KSIDS+ WKA++ G +HP+  D  GK TLK E++W+  +DEA+ GNSRALN IFN VDQN+FK IN C
Subjt:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC

Query:  VSTKEAWGILEVAYEGTLKLR
        +  KEAW ILE AYEGT K++
Subjt:  VSTKEAWGILEVAYEGTLKLR

TrEMBL top hitse value%identityAlignment
A0A1S3CKP5 uncharacterized protein LOC1035020616.4e-4064.46Show/hide
Query:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC
        +D +REGSSTTRP VLDG NYAYWKAR++AF KSIDS+ WKA++ G +HP+  D  GK TLK E++W+  +DEA+ GNSRALN IFN VDQN+FK IN C
Subjt:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC

Query:  VSTKEAWGILEVAYEGTLKLR
        +  KEAW ILE AYEGT K++
Subjt:  VSTKEAWGILEVAYEGTLKLR

A0A5A7SP99 Gag-pol polyprotein1.4e-3966.14Show/hide
Query:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC
        M++I+EG STTRP VLDG+NYAYWKARM AF KSID++TWKAV+  W+ PT+T  D K T K E  WT+ ED+ASLGNSRALN I+N  DQNVFKLIN C
Subjt:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC

Query:  VSTKEAWGILEVAYEGTLKLRCHVCKL
         S KEAW ILEVAYEGT K++  + +L
Subjt:  VSTKEAWGILEVAYEGTLKLRCHVCKL

A0A5A7SVY3 Gag-proteinase polyprotein6.4e-4064.46Show/hide
Query:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC
        +D +REGSSTTRP VLDG NYAYWKAR++AF KSIDS+ WKA++ G +HP+  D  GK TLK E++W+  +DEA+ GNSRALN IFN VDQN+FK IN C
Subjt:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC

Query:  VSTKEAWGILEVAYEGTLKLR
        +  KEAW ILE AYEGT K++
Subjt:  VSTKEAWGILEVAYEGTLKLR

A0A5A7VGN0 Gag-proteinase polyprotein4.6e-3862.81Show/hide
Query:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC
        MD IREG+STTRP +LDG NY YWK+RM+AF  S+D R+WKA++ GW+HPT  D  GKVT K EL W + ED+A++GNSRALN +FN VDQN+FKLIN  
Subjt:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC

Query:  VSTKEAWGILEVAYEGTLKLR
           K AW ILEVAYEGT  ++
Subjt:  VSTKEAWGILEVAYEGTLKLR

A0A5D3BG63 Gag-proteinase polyprotein4.1e-3959.5Show/hide
Query:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC
        MD +REG+STT+P +LDG NY YWKA+M+AF KS+DSR+WK+V+ GW+ P++ DA G +TLKP++ W   EDE S GNS+ LN + N VDQNV KLIN C
Subjt:  MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINAC

Query:  VSTKEAWGILEVAYEGTLKLR
         S K+ W ILEVAY+G  KL+
Subjt:  VSTKEAWGILEVAYEGTLKLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTCATTAGAGAAGGTAGTTCTACTACTAGGCCTCTAGTGCTCGATGGATTAAACTATGCCTATTGGAAGGCAAGAATGGTTGCATTTCGTAAGTCAATTGATAG
TAGAACATGGAAGGCAGTGGTGATAGGATGGGATCACCCTACGGTCACAGATGCTGATGGTAAGGTTACTCTCAAACCGGAGTTATCTTGGACCAATCCAGAGGATGAAG
CTTCCTTGGGAAACTCACGTGCACTAAATGTTATTTTCAATGATGTTGATCAGAATGTCTTCAAACTGATAAATGCCTGTGTTTCTACCAAAGAAGCTTGGGGAATTCTG
GAGGTTGCTTATGAAGGTACTCTAAAGTTAAGATGTCACGTTTGCAAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTCATTAGAGAAGGTAGTTCTACTACTAGGCCTCTAGTGCTCGATGGATTAAACTATGCCTATTGGAAGGCAAGAATGGTTGCATTTCGTAAGTCAATTGATAG
TAGAACATGGAAGGCAGTGGTGATAGGATGGGATCACCCTACGGTCACAGATGCTGATGGTAAGGTTACTCTCAAACCGGAGTTATCTTGGACCAATCCAGAGGATGAAG
CTTCCTTGGGAAACTCACGTGCACTAAATGTTATTTTCAATGATGTTGATCAGAATGTCTTCAAACTGATAAATGCCTGTGTTTCTACCAAAGAAGCTTGGGGAATTCTG
GAGGTTGCTTATGAAGGTACTCTAAAGTTAAGATGTCACGTTTGCAAACTTTGA
Protein sequenceShow/hide protein sequence
MDVIREGSSTTRPLVLDGLNYAYWKARMVAFRKSIDSRTWKAVVIGWDHPTVTDADGKVTLKPELSWTNPEDEASLGNSRALNVIFNDVDQNVFKLINACVSTKEAWGIL
EVAYEGTLKLRCHVCKL