; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009306 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009306
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr04:16785071..16785583
RNA-Seq ExpressionPI0009306
SyntenyPI0009306
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]1.0e-0654.17Show/hide
Query:  RQTEDQQDIAAEENDEED-FYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQ
        +Q  +QQ  AA E+D ED ++KFI +   KP+MD  +D+FQNQ  LQE   R EKQI +LELKIDN   HHQ
Subjt:  RQTEDQQDIAAEENDEED-FYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQ

KAA0049656.1 hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa]8.2e-0439.56Show/hide
Query:  EENDEEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQSQHDQLASEITSLKEQNKAMVTLIKKASLRS
        EE D    +KFI++ I KP+    ED FQ Q +LQE  +R +KQ+ +LELKIDN    +Q+Q DQ   E+  LK Q K+   +++ +  ++
Subjt:  EENDEEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQSQHDQLASEITSLKEQNKAMVTLIKKASLRS

KAA0067817.1 hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa]2.1e-0441.77Show/hide
Query:  DNHHQSQHDQLASEITSLKEQNKA-------MVTLIKKASLRSDMRYKSVMNYIHAAITSLVPKPAILSEFKEPLSDVE
        D     + +++ S+I  LK QN+A       M T IK+ASL ++M+ +++MNYIH  I SLVP P    E +EPL++VE
Subjt:  DNHHQSQHDQLASEITSLKEQNKA-------MVTLIKKASLRSDMRYKSVMNYIHAAITSLVPKPAILSEFKEPLSDVE

KGN49653.1 hypothetical protein Csa_018510 [Cucumis sativus]8.7e-0629.46Show/hide
Query:  QQDIAAEENDEEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQSQHDQLASEI-------TSLKEQNKAMVTLIKKA
        ++D+ A+  DE+   KF ++ + KPM    ED  Q Q + QE   + +KQ+ + +LK+DN   HHQ Q + L +++         LK QN+ ++ ++K+ 
Subjt:  QQDIAAEENDEEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQSQHDQLASEI-------TSLKEQNKAMVTLIKKA

Query:  SLRSDMRYKSVMNYIHAAITSLVPKPAIL
        +  +D+++ S + Y+++++ S++P P  L
Subjt:  SLRSDMRYKSVMNYIHAAITSLVPKPAIL

TYK26456.1 hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa]2.7e-0747.73Show/hide
Query:  EEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQSQHDQLASEITSLKEQNKAMVTLIKKASLRSD
        +++++KFI     KPM D  EDIFQ Q +LQE  +R +KQ+  LEL+IDN    HQ+Q D +  +I SLK QN+A+ TLIK+AS +++
Subjt:  EEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQSQHDQLASEITSLKEQNKAMVTLIKKASLRSD

TrEMBL top hitse value%identityAlignment
A0A0A0KJB9 Uncharacterized protein4.2e-0629.46Show/hide
Query:  QQDIAAEENDEEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQSQHDQLASEI-------TSLKEQNKAMVTLIKKA
        ++D+ A+  DE+   KF ++ + KPM    ED  Q Q + QE   + +KQ+ + +LK+DN   HHQ Q + L +++         LK QN+ ++ ++K+ 
Subjt:  QQDIAAEENDEEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQSQHDQLASEI-------TSLKEQNKAMVTLIKKA

Query:  SLRSDMRYKSVMNYIHAAITSLVPKPAIL
        +  +D+++ S + Y+++++ S++P P  L
Subjt:  SLRSDMRYKSVMNYIHAAITSLVPKPAIL

A0A5A7U0L9 Uncharacterized protein5.0e-0754.17Show/hide
Query:  RQTEDQQDIAAEENDEED-FYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQ
        +Q  +QQ  AA E+D ED ++KFI +   KP+MD  +D+FQNQ  LQE   R EKQI +LELKIDN   HHQ
Subjt:  RQTEDQQDIAAEENDEED-FYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQ

A0A5A7VKU1 Uncharacterized protein1.0e-0441.77Show/hide
Query:  DNHHQSQHDQLASEITSLKEQNKA-------MVTLIKKASLRSDMRYKSVMNYIHAAITSLVPKPAILSEFKEPLSDVE
        D     + +++ S+I  LK QN+A       M T IK+ASL ++M+ +++MNYIH  I SLVP P    E +EPL++VE
Subjt:  DNHHQSQHDQLASEITSLKEQNKA-------MVTLIKKASLRSDMRYKSVMNYIHAAITSLVPKPAILSEFKEPLSDVE

A0A5D3D645 Uncharacterized protein4.0e-0439.56Show/hide
Query:  EENDEEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQSQHDQLASEITSLKEQNKAMVTLIKKASLRS
        EE D    +KFI++ I KP+    ED FQ Q +LQE  +R +KQ+ +LELKIDN    +Q+Q DQ   E+  LK Q K+   +++ +  ++
Subjt:  EENDEEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQSQHDQLASEITSLKEQNKAMVTLIKKASLRS

A0A5D3DS12 Uncharacterized protein1.3e-0747.73Show/hide
Query:  EEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQSQHDQLASEITSLKEQNKAMVTLIKKASLRSD
        +++++KFI     KPM D  EDIFQ Q +LQE  +R +KQ+  LEL+IDN    HQ+Q D +  +I SLK QN+A+ TLIK+AS +++
Subjt:  EEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDN---HHQSQHDQLASEITSLKEQNKAMVTLIKKASLRSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGACTCCCAAAGACAAACAGAAGATCAACAAGATATTGCGGCAGAAGAAAATGATGAAGAAGATTTTTACAAGTTCATCAATGAGGCAATCGCAAAGCCAATGAT
GGATGAACTTGAAGATATTTTCCAAAACCAAGGCAGTCTACAGGAACGCGCGATAAGACAAGAGAAGCAGATTTTGGAGTTGGAGTTAAAAATAGACAACCATCATCAAT
CCCAACATGACCAGCTTGCATCTGAGATCACGAGCCTGAAAGAGCAGAACAAGGCAATGGTGACTTTGATCAAGAAGGCTTCTTTGCGGTCTGACATGCGATATAAATCC
GTGATGAATTATATCCACGCGGCCATCACAAGTCTCGTGCCCAAGCCTGCCATACTGTCTGAATTCAAAGAACCCCTTTCAGACGTTGAAGTGGACGTCGGGTCAGGACC
TTCCGAAAGGCGGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGACCGACTCCCAAAGACAAACAGAAGATCAACAAGATATTGCGGCAGAAGAAAATGATGAAGAAGATTTTTACAAGTTCATCAATGAGGCAATCGCAAAGCCAATGAT
GGATGAACTTGAAGATATTTTCCAAAACCAAGGCAGTCTACAGGAACGCGCGATAAGACAAGAGAAGCAGATTTTGGAGTTGGAGTTAAAAATAGACAACCATCATCAAT
CCCAACATGACCAGCTTGCATCTGAGATCACGAGCCTGAAAGAGCAGAACAAGGCAATGGTGACTTTGATCAAGAAGGCTTCTTTGCGGTCTGACATGCGATATAAATCC
GTGATGAATTATATCCACGCGGCCATCACAAGTCTCGTGCCCAAGCCTGCCATACTGTCTGAATTCAAAGAACCCCTTTCAGACGTTGAAGTGGACGTCGGGTCAGGACC
TTCCGAAAGGCGGCTATAA
Protein sequenceShow/hide protein sequence
MTDSQRQTEDQQDIAAEENDEEDFYKFINEAIAKPMMDELEDIFQNQGSLQERAIRQEKQILELELKIDNHHQSQHDQLASEITSLKEQNKAMVTLIKKASLRSDMRYKS
VMNYIHAAITSLVPKPAILSEFKEPLSDVEVDVGSGPSERRL