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PI0009330 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009330
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr05:7308163..7308510
RNA-Seq ExpressionPI0009330
SyntenyPI0009330
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]7.3e-1352.94Show/hide
Query:  MYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKVMPVVGDP
        MYSQGL+MS D++   R  + SEGR  SSGSKRKR  QA +S +++RTA+++ N+QL  I EW  LQRQD   T  +V+PV G P
Subjt:  MYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKVMPVVGDP
KAA0047716.1 retrotransposon protein [Cucumis melo var. makuwa]6.0e-1558.97Show/hide
Query:  MYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKV
        MYSQGLDMSSDDI  T+ +R+S+GR  S+GSKRK+GSQ VE+ +IIR+AM++AN+ L  I +WS +QRQD   T+ +V
Subjt:  MYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKV
KAA0060365.1 retrotransposon protein [Cucumis melo var. makuwa]5.0e-1462.67Show/hide
Query:  QGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKV
        QGLDM  DDI  TR  RSSE RTGSSGSKRK+G Q VES+EIIR+AM++ N QLKAI EWSN+   D   ++  V
Subjt:  QGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKV
KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]4.7e-2070Show/hide
Query:  MMYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKVM
        MMYSQG+DM SDDI  TR DRS+EGRTGSSGSKRK+G QAVE+MEIIR  M+ +ND+LKAIVEW N+QRQD  A   +V+
Subjt:  MMYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKVM
TYK08370.1 retrotransposon protein [Cucumis melo var. makuwa]6.0e-1558.97Show/hide
Query:  MYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKV
        MYSQGLDMSSDDI  T+ +R+S+GR  S+GSKRK+GSQ VE+ +IIR+AM++AN+ L  I +WS +QRQD   T+ +V
Subjt:  MYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKV
TrEMBL top hitse value%identityAlignment
A0A5A7SXX8 Retrotransposon protein3.5e-1352.94Show/hide
Query:  MYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKVMPVVGDP
        MYSQGL+MS D++   R  + SEGR  SSGSKRKR  QA +S +++RTA+++ N+QL  I EW  LQRQD   T  +V+PV G P
Subjt:  MYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKVMPVVGDP
A0A5A7U0G0 Retrotransposon protein2.9e-1558.97Show/hide
Query:  MYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKV
        MYSQGLDMSSDDI  T+ +R+S+GR  S+GSKRK+GSQ VE+ +IIR+AM++AN+ L  I +WS +QRQD   T+ +V
Subjt:  MYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKV
A0A5A7V3C0 Retrotransposon protein2.4e-1462.67Show/hide
Query:  QGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKV
        QGLDM  DDI  TR  RSSE RTGSSGSKRK+G Q VES+EIIR+AM++ N QLKAI EWSN+   D   ++  V
Subjt:  QGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKV
A0A5A7V469 Retrotransposon protein2.3e-2070Show/hide
Query:  MMYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKVM
        MMYSQG+DM SDDI  TR DRS+EGRTGSSGSKRK+G QAVE+MEIIR  M+ +ND+LKAIVEW N+QRQD  A   +V+
Subjt:  MMYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKVM
A0A5D3CAJ4 Retrotransposon protein2.9e-1558.97Show/hide
Query:  MYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKV
        MYSQGLDMSSDDI  T+ +R+S+GR  S+GSKRK+GSQ VE+ +IIR+AM++AN+ L  I +WS +QRQD   T+ +V
Subjt:  MYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTACAGTCAGGGACTGGATATGTCATCTGATGACATCGCGAGCACACGACTCGATCGATCGAGTGAGGGTAGGACTGGTTCAAGCGGATCGAAGAGAAAGCGGGG
AAGCCAGGCGGTAGAGAGTATGGAAATCATTCGAACTGCAATGGACTTCGCTAATGACCAGTTGAAGGCCATTGTAGAGTGGTCGAATTTACAACGTCAAGATAAACGCG
CCACTTATGCAAAAGTCATGCCAGTTGTAGGGGATCCCAGAATTGAGTACCCGAGACAGGGTACGCCTTATAAGGATACTGATGTGCAATGTGAACAACATGAAAGCATT
CTTGGAGGTACCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTACAGTCAGGGACTGGATATGTCATCTGATGACATCGCGAGCACACGACTCGATCGATCGAGTGAGGGTAGGACTGGTTCAAGCGGATCGAAGAGAAAGCGGGG
AAGCCAGGCGGTAGAGAGTATGGAAATCATTCGAACTGCAATGGACTTCGCTAATGACCAGTTGAAGGCCATTGTAGAGTGGTCGAATTTACAACGTCAAGATAAACGCG
CCACTTATGCAAAAGTCATGCCAGTTGTAGGGGATCCCAGAATTGAGTACCCGAGACAGGGTACGCCTTATAAGGATACTGATGTGCAATGTGAACAACATGAAAGCATT
CTTGGAGGTACCCGATGA
Protein sequenceShow/hide protein sequence
MMYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKVMPVVGDPRIEYPRQGTPYKDTDVQCEQHESI
LGGTR