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PI0009345 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009345
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr07:17490853..17492210
RNA-Seq ExpressionPI0009345
SyntenyPI0009345
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025967.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.0e-5066.29Show/hide
Query:  QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADD-PQVLDICNNNERRSTS-------------SDTNTEPNCYGSPMMMMATFEAGY
        QQFD DVTQEYIH YNN+MRLYITR G AVGHLRSNN RLRDV DD  QVLDICNNNER                          YGSPM MM T  AGY
Subjt:  QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADD-PQVLDICNNNERRSTS-------------SDTNTEPNCYGSPMMMMATFEAGY

Query:  CDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRV
        CD EV TGYYD+GVSPSSSYMDVGPSTSYM  H HGRG G+HN+YLY+ AP  V D QEY+QEPENQE+  Q RV
Subjt:  CDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRV

KAA0054357.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.7e-5370Show/hide
Query:  QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADDP-QVLDICNNNERR----STSSDTNTEPNCYGSPMMMMATFEAGYCDYEVGTGY
        QQFD DVTQEYIH YNNI RLYITR G AVGHLRSNN RLRDV D P QVLDICNNNE+         D       YGSPM +M TF AGYCD +V TGY
Subjt:  QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADDP-QVLDICNNNERR----STSSDTNTEPNCYGSPMMMMATFEAGYCDYEVGTGY

Query:  YDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRVQSRR
        YD+GV PSS YMDVGPS SYM  HGHGRG G+HN+YLY+ AP DV D QEYQQEPENQE+  Q RVQSRR
Subjt:  YDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRVQSRR

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.6e-5862.56Show/hide
Query:  QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADD-PQVLDICNNNER-------------------------------------RSTS
        QQFD+DVTQEYIH Y+NI RLYITR GAAVG  RSNN RLRDVADD  Q LDICNNNER                                         
Subjt:  QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADD-PQVLDICNNNER-------------------------------------RSTS

Query:  SDTNTEPNC-YGSPMMMMATFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRV
        S T T+    YGSPM MM TFEAGYCD+EVG GYYD+GV PSSSY+DV PSTSYM  HGH RG G+HNEYLY+ AP DV D QEYQQEPENQE+  Q RV
Subjt:  SDTNTEPNC-YGSPMMMMATFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRV

Query:  QSRRRQPIRNRRRPGCGTH
        QSRRRQP RNRRRPGCGTH
Subjt:  QSRRRQPIRNRRRPGCGTH

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]7.0e-4653.3Show/hide
Query:  MFDLLQRDQQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADD-PQVLDICNNNER---------------------------------
        MFDLLQRDQ     + + Y    +N++  +           RSNN RLRDVADD  Q LDICNNNER                                 
Subjt:  MFDLLQRDQQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADD-PQVLDICNNNER---------------------------------

Query:  ----RSTSSDTNTEPNC-YGSPMMMMATFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQ
                S T T+    YGSPM MM TFEAGYCD+EVG GYYD+GV PSSSY+DV PSTSYM  HGH RG G+HNEYLY+ AP DV D QEYQQEPENQ
Subjt:  ----RSTSSDTNTEPNC-YGSPMMMMATFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQ

Query:  EELGQPRVQSRRRQPIRNRRRPGCGTH
        E+  Q RVQSRRRQP RNRR PGCGTH
Subjt:  EELGQPRVQSRRRQPIRNRRRPGCGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.8e-5746.85Show/hide
Query:  MAPQLRHANDHLLPRRAHGS-------------------QYMFDLLQRD---------------------------------------------------
        +APQL H NDHLL  RA GS                   +YMFDLLQRD                                                   
Subjt:  MAPQLRHANDHLLPRRAHGS-------------------QYMFDLLQRD---------------------------------------------------

Query:  --------------QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADDP-QVLDICNNNER---------------------------
                      QQFD DVTQEYIH YNNI RLYITR GA VGHLRSNN RLRDV +DP QVLDICNNNER                           
Subjt:  --------------QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADDP-QVLDICNNNER---------------------------

Query:  ----------RSTSSDTNTEPNC-YGSPMMMMATFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQ
                        T T+    YGSPM MM TF AGYCD EV  GYYD+ V P SSYMDVGPSTSYM  +GHGRG G+HNEYLY+ APTDV D QEYQ
Subjt:  ----------RSTSSDTNTEPNC-YGSPMMMMATFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQ

Query:  QEPENQEELGQPRVQSRRRQPIRNRRRPGCGTH
        QEP+NQE+  Q RVQSRRRQP RNR+  GCGTH
Subjt:  QEPENQEELGQPRVQSRRRQPIRNRRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SMM2 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.9e-5066.29Show/hide
Query:  QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADD-PQVLDICNNNERRSTS-------------SDTNTEPNCYGSPMMMMATFEAGY
        QQFD DVTQEYIH YNN+MRLYITR G AVGHLRSNN RLRDV DD  QVLDICNNNER                          YGSPM MM T  AGY
Subjt:  QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADD-PQVLDICNNNERRSTS-------------SDTNTEPNCYGSPMMMMATFEAGY

Query:  CDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRV
        CD EV TGYYD+GVSPSSSYMDVGPSTSYM  H HGRG G+HN+YLY+ AP  V D QEY+QEPENQE+  Q RV
Subjt:  CDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRV

A0A5A7UIF6 Serine/threonine-protein phosphatase 7 long form-like protein3.7e-5370Show/hide
Query:  QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADDP-QVLDICNNNERR----STSSDTNTEPNCYGSPMMMMATFEAGYCDYEVGTGY
        QQFD DVTQEYIH YNNI RLYITR G AVGHLRSNN RLRDV D P QVLDICNNNE+         D       YGSPM +M TF AGYCD +V TGY
Subjt:  QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADDP-QVLDICNNNERR----STSSDTNTEPNCYGSPMMMMATFEAGYCDYEVGTGY

Query:  YDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRVQSRR
        YD+GV PSS YMDVGPS SYM  HGHGRG G+HN+YLY+ AP DV D QEYQQEPENQE+  Q RVQSRR
Subjt:  YDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRVQSRR

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.8e-5962.56Show/hide
Query:  QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADD-PQVLDICNNNER-------------------------------------RSTS
        QQFD+DVTQEYIH Y+NI RLYITR GAAVG  RSNN RLRDVADD  Q LDICNNNER                                         
Subjt:  QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADD-PQVLDICNNNER-------------------------------------RSTS

Query:  SDTNTEPNC-YGSPMMMMATFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRV
        S T T+    YGSPM MM TFEAGYCD+EVG GYYD+GV PSSSY+DV PSTSYM  HGH RG G+HNEYLY+ AP DV D QEYQQEPENQE+  Q RV
Subjt:  SDTNTEPNC-YGSPMMMMATFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRV

Query:  QSRRRQPIRNRRRPGCGTH
        QSRRRQP RNRRRPGCGTH
Subjt:  QSRRRQPIRNRRRPGCGTH

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X23.4e-4653.3Show/hide
Query:  MFDLLQRDQQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADD-PQVLDICNNNER---------------------------------
        MFDLLQRDQ     + + Y    +N++  +           RSNN RLRDVADD  Q LDICNNNER                                 
Subjt:  MFDLLQRDQQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADD-PQVLDICNNNER---------------------------------

Query:  ----RSTSSDTNTEPNC-YGSPMMMMATFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQ
                S T T+    YGSPM MM TFEAGYCD+EVG GYYD+GV PSSSY+DV PSTSYM  HGH RG G+HNEYLY+ AP DV D QEYQQEPENQ
Subjt:  ----RSTSSDTNTEPNC-YGSPMMMMATFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQ

Query:  EELGQPRVQSRRRQPIRNRRRPGCGTH
        E+  Q RVQSRRRQP RNRR PGCGTH
Subjt:  EELGQPRVQSRRRQPIRNRRRPGCGTH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein8.6e-5846.85Show/hide
Query:  MAPQLRHANDHLLPRRAHGS-------------------QYMFDLLQRD---------------------------------------------------
        +APQL H NDHLL  RA GS                   +YMFDLLQRD                                                   
Subjt:  MAPQLRHANDHLLPRRAHGS-------------------QYMFDLLQRD---------------------------------------------------

Query:  --------------QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADDP-QVLDICNNNER---------------------------
                      QQFD DVTQEYIH YNNI RLYITR GA VGHLRSNN RLRDV +DP QVLDICNNNER                           
Subjt:  --------------QQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADDP-QVLDICNNNER---------------------------

Query:  ----------RSTSSDTNTEPNC-YGSPMMMMATFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQ
                        T T+    YGSPM MM TF AGYCD EV  GYYD+ V P SSYMDVGPSTSYM  +GHGRG G+HNEYLY+ APTDV D QEYQ
Subjt:  ----------RSTSSDTNTEPNC-YGSPMMMMATFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQ

Query:  QEPENQEELGQPRVQSRRRQPIRNRRRPGCGTH
        QEP+NQE+  Q RVQSRRRQP RNR+  GCGTH
Subjt:  QEPENQEELGQPRVQSRRRQPIRNRRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCACAATTAAGACATGCAAACGATCATCTACTACCTAGACGAGCACACGGTTCACAGTACATGTTTGATCTTCTTCAGCGTGATCAGCAATTTGATCGGGATGT
GACTCAAGAATACATCCACTGTTATAATAATATTATGAGGCTCTACATCACTCGACTGGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTG
CAGATGATCCACAAGTCCTTGATATATGTAATAATAATGAGAGAAGAAGTACCTCCAGTGACACGAACACAGAGCCAAACTGTTATGGTAGCCCGATGATGATGATGGCA
ACATTTGAAGCAGGATATTGTGATTATGAGGTCGGTACAGGATATTACGACTCAGGGGTCAGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGGA
TGGACATGGACACGGACGCGGCCGCGGAAAACATAACGAATATCTGTACTATGGAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAG
AGGAGTTAGGGCAACCAAGAGTTCAGAGTCGACGACGACAACCAATTCGAAATCGACGACGTCCAGGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCACAATTAAGACATGCAAACGATCATCTACTACCTAGACGAGCACACGGTTCACAGTACATGTTTGATCTTCTTCAGCGTGATCAGCAATTTGATCGGGATGT
GACTCAAGAATACATCCACTGTTATAATAATATTATGAGGCTCTACATCACTCGACTGGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTG
CAGATGATCCACAAGTCCTTGATATATGTAATAATAATGAGAGAAGAAGTACCTCCAGTGACACGAACACAGAGCCAAACTGTTATGGTAGCCCGATGATGATGATGGCA
ACATTTGAAGCAGGATATTGTGATTATGAGGTCGGTACAGGATATTACGACTCAGGGGTCAGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATGGA
TGGACATGGACACGGACGCGGCCGCGGAAAACATAACGAATATCTGTACTATGGAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAG
AGGAGTTAGGGCAACCAAGAGTTCAGAGTCGACGACGACAACCAATTCGAAATCGACGACGTCCAGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MAPQLRHANDHLLPRRAHGSQYMFDLLQRDQQFDRDVTQEYIHCYNNIMRLYITRLGAAVGHLRSNNRRLRDVADDPQVLDICNNNERRSTSSDTNTEPNCYGSPMMMMA
TFEAGYCDYEVGTGYYDSGVSPSSSYMDVGPSTSYMDGHGHGRGRGKHNEYLYYGAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPIRNRRRPGCGTH