; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009355 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009355
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description50S ribosomal protein L9, chloroplastic
Genome locationchr06:8315547..8321240
RNA-Seq ExpressionPI0009355
SyntenyPI0009355
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000244 - Ribosomal protein L9
IPR009027 - Ribosomal protein L9/RNase H1, N-terminal
IPR020070 - Ribosomal protein L9, N-terminal
IPR036935 - Ribosomal protein L9, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574247.1 hypothetical protein SDJN03_28134, partial [Cucurbita argyrosperma subsp. sororia]5.2e-4291.49Show/hide
Query:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV
        MACIQYG+NAL++IIKDT+LHPSD+MMQPLLFS QGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPK+LAVPNIDKYAYLIKEQRR+
Subjt:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV

XP_004146229.1 uncharacterized protein LOC101217377 [Cucumis sativus]6.1e-4395.74Show/hide
Query:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV
        MACIQY RNALR IIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNI+KYAYLIKEQRR+
Subjt:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV

XP_008455982.1 PREDICTED: 50S ribosomal protein L9 [Cucumis melo]1.8e-4293.62Show/hide
Query:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV
        MACIQYGRNALR+IIKDT LHPSDQMMQPLLF+GQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNI+KYA+LIKEQRR+
Subjt:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV

XP_023541498.1 uncharacterized protein LOC111801661 [Cucurbita pepo subsp. pepo]5.2e-4291.49Show/hide
Query:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV
        MACIQYG+NAL++IIKDT+LHPSD+MMQPLLFS QGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPK+LAVPNIDKYAYLIKEQRR+
Subjt:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV

XP_038895552.1 50S ribosomal protein L9 [Benincasa hispida]8.0e-4393.62Show/hide
Query:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV
        MACIQYGRNALRQIIKDT+LHPSD+MMQPLLFS QGVRHRKLEVILTTSIEKLGKAGETVKVAPG+FRNHLMPK+LAVPNIDKYAYLIKEQRR+
Subjt:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV

TrEMBL top hitse value%identityAlignment
A0A0A0LAH8 50S ribosomal protein L9, chloroplastic1.4e-4895.15Show/hide
Query:  PPPTCRKIRMACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQ
        PPPTC KIRMACIQY RNALR IIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNI+KYAYLIKEQ
Subjt:  PPPTCRKIRMACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQ

Query:  RRV
        RR+
Subjt:  RRV

A0A1S3C248 50S ribosomal protein L9, chloroplastic8.6e-4393.62Show/hide
Query:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV
        MACIQYGRNALR+IIKDT LHPSDQMMQPLLF+GQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNI+KYA+LIKEQRR+
Subjt:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV

A0A6J1CID3 50S ribosomal protein L9, chloroplastic1.6e-4190.43Show/hide
Query:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV
        MAC+QYGRNALRQIIKDT+LH SDQM+QPLLF  QGVRHRKLEVILTTSIEKLGKAGETVKVAPG+FRNHLMPK+LAVPNIDKYAYLIKEQRR+
Subjt:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV

A0A6J1FZ52 50S ribosomal protein L9, chloroplastic3.3e-4290.43Show/hide
Query:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV
        MACIQYG+NAL++IIKDT+LHPSD+MMQPLLFS QGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPK+LAVPNIDKYAYL+KEQRR+
Subjt:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV

A0A6J1HYV2 50S ribosomal protein L9, chloroplastic2.5e-4291.49Show/hide
Query:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV
        MACIQYG+NAL++IIKDT+LHPSD+MMQPLLFS QGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPK+LAVPNIDKYAYLIKEQRR+
Subjt:  MACIQYGRNALRQIIKDTKLHPSDQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV

SwissProt top hitse value%identityAlignment
A1AM21 50S ribosomal protein L91.1e-0544.07Show/hide
Query:  LEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRVCLFNLD
        ++VIL  +I+ LG  G+ VKVAPGY RN+L+PK LAV   +K A  ++  +R   +  D
Subjt:  LEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRVCLFNLD

B1WTN1 50S ribosomal protein L93.1e-0545.61Show/hide
Query:  RKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPK---ILAVPNIDKYAYLIKEQRR
        ++++V+L  SI KLGK G+ V+VAPGY RN+L+P+    LA P I K     +E+ R
Subjt:  RKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPK---ILAVPNIDKYAYLIKEQRR

B3E6H6 50S ribosomal protein L91.1e-0540.98Show/hide
Query:  LEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRVCLFNLDHS
        +++IL  +IE LG+ G+ VKVAPGY RN+L+PK LA+   +K A  ++  +R   +  + S
Subjt:  LEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRVCLFNLDHS

Q01QR6 50S ribosomal protein L91.4e-0545.45Show/hide
Query:  LEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRVCL
        +EVIL   IE LG  G+ VKVAPGY RN L+PK +AV   +    +++++R+  L
Subjt:  LEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRVCL

Q115S4 50S ribosomal protein L94.0e-0543.86Show/hide
Query:  RKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILA---VPNIDKYAYLIKEQRR
        +KL+V+L   + KLGK+G+ V VAPGY RN+L+P  +A    P + K     +EQ R
Subjt:  RKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILA---VPNIDKYAYLIKEQRR

Arabidopsis top hitse value%identityAlignment
AT5G53070.1 Ribosomal protein L9/RNase H12.2e-3067.71Show/hide
Query:  MACIQYGRNALRQII-KDTKLHPSDQMM-QPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV
        MA +   RN +R ++ + T  H  +  +  PLLF+ QGVR+RKLEVILTT IEKLGKAGETVKVAPGYFRNHLMPK+LAVPNIDKYAYLI+EQR++
Subjt:  MACIQYGRNALRQII-KDTKLHPSDQMM-QPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTCATCAAGAAGAATCCACTGTCTTATGAAGTCACTTCATCTTCTGAACAATTAAGCCAAGAAGCTTCAGAGCCCACTATAATGTCAATAATGATGACAGACGT
GGGTATAGATGAAGAAAGAATGGTTGGACTAGAAAAGAAGGAAAAAGACGAGAAGACTCAAAGTTATCGAGAAGAATATGAAATACGTCACTCAACTCTGAAGGAAAGAC
AAGAGAAAGTTTATCCTTTTCTTGATGTTGACATTCCTAAAATGTTAGAACAATTGCTAAAAGCTCGACTGATTCAACTTCCTAAAGTTATCATCCAAGAAAGATTAATA
AGCCCGAGGGTTGATTCTCAAAAGATTAACACATCCTCCAAGAAATCAACAAGTCAAACGTCGATCCATCAAGATCAACAAGACCAAAGGTCGATCATCAAGGAAAATCA
TCAAGCTCAAAGGTCGATCATCAAGAAATTTCATCAAGCTCAAAGTTCGATCATCCAAGAGGATCAACAAGCCCAAAGGTCGATCGTCAAGGAAGATCATCAAACCCAAA
GTCCACCGCCACCGCCACCGCCGACTTGTCGTAAGATCCGAATGGCTTGTATACAGTATGGTAGAAATGCACTCCGACAAATTATTAAAGATACCAAGCTCCATCCTTCT
GATCAAATGATGCAGCCATTGTTATTCTCGGGTCAGGGAGTTAGACATAGGAAGTTGGAAGTTATTCTCACAACAAGCATTGAAAAGCTTGGGAAAGCTGGAGAGACAGT
TAAGGTTGCCCCTGGATACTTTCGGAACCATCTTATGCCCAAGATACTGGCTGTTCCAAATATTGACAAGTATGCTTATCTGATTAAGGAGCAGCGTAGGGTATGTCTCT
TCAATTTGGATCATTCCAGATACTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTCATCAAGAAGAATCCACTGTCTTATGAAGTCACTTCATCTTCTGAACAATTAAGCCAAGAAGCTTCAGAGCCCACTATAATGTCAATAATGATGACAGACGT
GGGTATAGATGAAGAAAGAATGGTTGGACTAGAAAAGAAGGAAAAAGACGAGAAGACTCAAAGTTATCGAGAAGAATATGAAATACGTCACTCAACTCTGAAGGAAAGAC
AAGAGAAAGTTTATCCTTTTCTTGATGTTGACATTCCTAAAATGTTAGAACAATTGCTAAAAGCTCGACTGATTCAACTTCCTAAAGTTATCATCCAAGAAAGATTAATA
AGCCCGAGGGTTGATTCTCAAAAGATTAACACATCCTCCAAGAAATCAACAAGTCAAACGTCGATCCATCAAGATCAACAAGACCAAAGGTCGATCATCAAGGAAAATCA
TCAAGCTCAAAGGTCGATCATCAAGAAATTTCATCAAGCTCAAAGTTCGATCATCCAAGAGGATCAACAAGCCCAAAGGTCGATCGTCAAGGAAGATCATCAAACCCAAA
GTCCACCGCCACCGCCACCGCCGACTTGTCGTAAGATCCGAATGGCTTGTATACAGTATGGTAGAAATGCACTCCGACAAATTATTAAAGATACCAAGCTCCATCCTTCT
GATCAAATGATGCAGCCATTGTTATTCTCGGGTCAGGGAGTTAGACATAGGAAGTTGGAAGTTATTCTCACAACAAGCATTGAAAAGCTTGGGAAAGCTGGAGAGACAGT
TAAGGTTGCCCCTGGATACTTTCGGAACCATCTTATGCCCAAGATACTGGCTGTTCCAAATATTGACAAGTATGCTTATCTGATTAAGGAGCAGCGTAGGGTATGTCTCT
TCAATTTGGATCATTCCAGATACTTTTGATTGTTTTTACATACGTGTTCATTGATAAGTTTTAGTTTGTTGTTTCTTCCCAATTGCAAAGAGAGGGGTTGGGGAGAAGAC
AAATGAATTTAGATTACTGTAAATCCTGCTTCTTTTTACTTGTTAATGGTTGGTGTACTTTTTTTTTTTTTTTTTTTTTGGTTTGATTTTAAATTTTTAGCAACCCCCAT
GACATCACATTTGAGTGGTATGAAAATTCATAATCTTTAATTTAACCATAGTGTGGAGACTTGGTGGAGTATAGGCTGATTGATTTTTCTGTCATAGCTTGGTTTTCTCA
TGTTGGGTGTATCTCCATAGTAGATTTCACACGAGGATTCAGATGCGTTTCTTTGGTTTTTTATCATTTCAATTTGATTGAATTTAGATTTACCAACCGGTTGAGGAAGA
GGTCGTTAAGATCGTGACAGTGACGAAGGAGGATAAGATGAAAGAATATGAAAAGGCAGCAAGACGTCTGGATAGTACACAGCTGGTTTGTAACTTCATTTTTTATCCAA
TATGTTTGAAGTTGTTTACTTAGGTTTGGAACATTTTGGATACTTTGATGTTCCTTGATTCATTCTATATTTTATTAGCTATAGTTGATGCATGACATTTTTTTAGGTGT
TGAGGAGGTTAATTGACAAGGAAAAGTTCCGTACCCGTGCTACAAAAGATGAGCCCTTAGCTCTGCAATCTTCTGTGACAGTAGACGACATTGTTGCTGAGGTGGCACGC
CAATTTTCTGTTCAAATCGTACCCGAAAATTTGAATTTACCATCCCCCTTGTCAGCATGTGGTGAATATGAAGTACCACTCCGCTTTCCAAAGTCGATTCCCTTGCCTGA
AGGAAAGGTCTACTGGACTCTCAAAGTGAAAGTCCGTAGTAAATAAAAAGTGGTAAACGCTAGCTCTCACTTTATGGTGCGTCTGTCTTGGGTTTCTTTAGATTGTTAGG
CCTTTTAGACTTTTAGTTATTGAGTTGACTGTTTGCTGGTTCCTCAATGATTGAATTGAAGCTATTTGCTTCACAACATAAAGGATTCACTCTTTGACACATGAATCAAC
GTGATAATTTATGCGTTCTTGAATT
Protein sequenceShow/hide protein sequence
MIVIKKNPLSYEVTSSSEQLSQEASEPTIMSIMMTDVGIDEERMVGLEKKEKDEKTQSYREEYEIRHSTLKERQEKVYPFLDVDIPKMLEQLLKARLIQLPKVIIQERLI
SPRVDSQKINTSSKKSTSQTSIHQDQQDQRSIIKENHQAQRSIIKKFHQAQSSIIQEDQQAQRSIVKEDHQTQSPPPPPPPTCRKIRMACIQYGRNALRQIIKDTKLHPS
DQMMQPLLFSGQGVRHRKLEVILTTSIEKLGKAGETVKVAPGYFRNHLMPKILAVPNIDKYAYLIKEQRRVCLFNLDHSRYF