CuGenDBv2

Gene ID	PI0009373
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Tudor domain-containing protein 3 isoform X1
Genome location	chr02:17520704..17521141
RNA-Seq Expression	PI0009373
Synteny	PI0009373
Gene Ontology terms	NA
InterPro domains	IPR042470 - RecQ mediated genome instability protein, N-terminal, subdomain 2

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0043355.1 tudor domain-containing protein 3 isoform X1 [Cucumis melo var. makuwa]

1.8e-37

91.01

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS
        IRLENKAPVHSGIACLG KGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGD+DGPPPFEKLQVGVPSQKLG+KGK S Q  S S
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS

KAE8653142.1 hypothetical protein Csa_020071 [Cucumis sativus]

6.3e-38

92.13

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS
        IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSR S+RLSQGGDVDGPPPFEKLQVG PSQKLGQKGKSS Q  S S
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS

XP_004149862.2 tudor domain-containing protein 3 [Cucumis sativus]

6.3e-38

92.13

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS
        IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSR S+RLSQGGDVDGPPPFEKLQVG PSQKLGQKGKSS Q  S S
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS

XP_008463347.1 PREDICTED: tudor domain-containing protein 3 isoform X1 [Cucumis melo]

1.8e-37

91.01

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS
        IRLENKAPVHSGIACLG KGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGD+DGPPPFEKLQVGVPSQKLG+KGK S Q  S S
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS

XP_008463350.1 PREDICTED: tudor domain-containing protein 3 isoform X2 [Cucumis melo]

1.8e-37

91.01

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS
        IRLENKAPVHSGIACLG KGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGD+DGPPPFEKLQVGVPSQKLG+KGK S Q  S S
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LWZ7 Uncharacterized protein

1.5e-64

94.93

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLSAYILVLLLFLL
        IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSR S+RLSQGGDVDGPPPFEKLQVG PSQKLGQKGKSSCQYFSLSAYILVLLLFLL
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLSAYILVLLLFLL

Query:  YCILPLLLKLLPLLSSLKVYHLEWQVLGLRSLAILDAY
        YC+L LLLKLLPLLSSLK+YHLEWQVLGL SLAILDAY
Subjt:  YCILPLLLKLLPLLSSLKVYHLEWQVLGLRSLAILDAY

A0A1S3CJF1 tudor domain-containing protein 3 isoform X2

8.9e-38

91.01

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS
        IRLENKAPVHSGIACLG KGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGD+DGPPPFEKLQVGVPSQKLG+KGK S Q  S S
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS

A0A1S4E471 tudor domain-containing protein 3 isoform X1

8.9e-38

91.01

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS
        IRLENKAPVHSGIACLG KGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGD+DGPPPFEKLQVGVPSQKLG+KGK S Q  S S
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS

A0A5A7TPL5 Tudor domain-containing protein 3 isoform X1

8.9e-38

91.01

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS
        IRLENKAPVHSGIACLG KGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGD+DGPPPFEKLQVGVPSQKLG+KGK S Q  S S
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLS

A0A6J1JHQ1 tudor domain-containing protein 3 isoform X2

1.3e-33

85.71

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQ
        +RLE KAPV+SGI CL SKGL+VLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEK QVG PSQK   KGKSS Q
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G19950.1 Domain of unknown function (DUF1767)

4.4e-13

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQV
        +RLENKA +  G+ CL  K ++VLGG V +L EEW+M +KY+ L+R+  + S+ G  DGPPPFE+L++
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQV

AT5G19950.2 Domain of unknown function (DUF1767)

4.4e-13

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQV
        +RLENKA +  G+ CL  K ++VLGG V +L EEW+M +KY+ L+R+  + S+ G  DGPPPFE+L++
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQV

AT5G19950.3 Domain of unknown function (DUF1767)

4.4e-13

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Query:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQV
        +RLENKA +  G+ CL  K ++VLGG V +L EEW+M +KY+ L+R+  + S+ G  DGPPPFE+L++
Subjt:  IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQV

Sequences

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CDS sequence

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ATTCGTTTGGAAAATAAAGCTCCAGTGCATAGTGGAATAGCATGTTTAGGTTCAAAAGGGTTATCGGTGCTTGGAGGTGTAGTTCCAACACTTTATGAAGAATGGAAAAT
GAACCAAAAATACTCTGGTTTATCCCGTGCATCCATAAGATTATCACAGGGAGGAGATGTTGATGGTCCACCGCCATTTGAGAAGTTGCAAGTTGGAGTGCCTTCACAAA
AACTTGGTCAGAAAGGGAAATCTTCATGTCAGTATTTCAGCTTAAGCGCCTATATTCTTGTACTACTTTTATTTCTGTTGTATTGCATATTGCCACTGTTGCTTAAATTA
TTGCCTTTGCTTTCTTCATTAAAAGTTTATCATTTAGAGTGGCAAGTTTTGGGACTCAGGTCCCTTGCGATCCTTGATGCATATACCTCTTACATCTTTCCACGGTAG

mRNA sequence

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Protein sequence

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IRLENKAPVHSGIACLGSKGLSVLGGVVPTLYEEWKMNQKYSGLSRASIRLSQGGDVDGPPPFEKLQVGVPSQKLGQKGKSSCQYFSLSAYILVLLLFLLYCILPLLLKL
LPLLSSLKVYHLEWQVLGLRSLAILDAYTSYIFPR

PI0009373 (gene) of Melon (PI 482460) v1 genome