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PI0009396 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009396
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:18329170..18329844
RNA-Seq ExpressionPI0009396
SyntenyPI0009396
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035763.1 hypothetical protein E6C27_scaffold403G00380 [Cucumis melo var. makuwa]7.2e-0753.03Show/hide
Query:  MNNTYTQIKDTLDVMSRNHEEIEDNNFGSRYGSRRGNEEGFDKNAVTVLQGQITVMNNLLQSMALT
        + ++  QIK TLD M+ N+EE +D++F S    R  NEEG D N V  LQGQ+TVMNNLLQS+ L+
Subjt:  MNNTYTQIKDTLDVMSRNHEEIEDNNFGSRYGSRRGNEEGFDKNAVTVLQGQITVMNNLLQSMALT

KAA0045193.1 hypothetical protein E6C27_scaffold30G001940 [Cucumis melo var. makuwa]1.0e-1655.56Show/hide
Query:  MKPVMLQMIQTIGQFEGYLDKDPM--ITSRVFTGYALPFICRLSQEELCLTLFPFTLKDDAKKWVGTLEV-------------RELVAMNNTYTQIKDTL
        MKP ML MIQT  QF GYLD+DP   I S      +    C LSQE+L +T F FTLKDD KKWVGTLEV             R    M  TYTQIKDTL
Subjt:  MKPVMLQMIQTIGQFEGYLDKDPM--ITSRVFTGYALPFICRLSQEELCLTLFPFTLKDDAKKWVGTLEV-------------RELVAMNNTYTQIKDTL

Query:  DVMSRNHE
        D+MSRNHE
Subjt:  DVMSRNHE

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]2.6e-0945.54Show/hide
Query:  CRLSQEELCLTLFPFTLKDDAKKWVGTLEVRELVAMNNTYTQIKDTLDVMSRNHEEIEDNNFGSRYGSRRGNEEGFDKNAVTVLQGQITVMNNLLQSMAL
        C    E + + +F F L  D  + V TL V  +  + ++Y QIK TLD MS N +E +D  FGSR+  R   +EG DK+ V VLQGQ+  MNNLLQSM L
Subjt:  CRLSQEELCLTLFPFTLKDDAKKWVGTLEVRELVAMNNTYTQIKDTLDVMSRNHEEIEDNNFGSRYGSRRGNEEGFDKNAVTVLQGQITVMNNLLQSMAL

Query:  T
        +
Subjt:  T

TYK23266.1 uncharacterized protein E5676_scaffold142G003190 [Cucumis melo var. makuwa]1.1e-0740.34Show/hide
Query:  MKPVMLQMIQTIGQFEGYLDKDPMITSRVFTGYALPFICRLSQEELCLTLFPFTLKDDAKKWVGTLE------------VRELVAMNNTYTQIKDTLDVM
        MK VMLQMIQT G       K  M+  R F  +                       D+A KWVGTLE             R    M+  YTQIKDTLD M
Subjt:  MKPVMLQMIQTIGQFEGYLDKDPMITSRVFTGYALPFICRLSQEELCLTLFPFTLKDDAKKWVGTLE------------VRELVAMNNTYTQIKDTLDVM

Query:  SRNHEEIEDNNFGSRYGSR
        SRNH++ EDNNFG  Y  R
Subjt:  SRNHEEIEDNNFGSRYGSR

XP_038874908.1 uncharacterized protein LOC120067411 [Benincasa hispida]7.2e-0733.91Show/hide
Query:  MKPVMLQMIQTIGQFEGYLDKDPMITSRVFTGYALPFIC-RLSQEELCLTLFPFTLKDDAKKWVGTLE---VRELVA--------MNNTYTQIKDTLDVM
        MK VMLQM+QT GQF G   +DP    + F      F+   ++ E + L+LFP++L+DDAK+W+   +     ++VA        M+ +YT+ K+ LD +
Subjt:  MKPVMLQMIQTIGQFEGYLDKDPMITSRVFTGYALPFIC-RLSQEELCLTLFPFTLKDDAKKWVGTLE---VRELVA--------MNNTYTQIKDTLDVM

Query:  SRNHEEIEDNNFGSR
        ++++ E  D+ + +R
Subjt:  SRNHEEIEDNNFGSR

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein1.3e-0945.54Show/hide
Query:  CRLSQEELCLTLFPFTLKDDAKKWVGTLEVRELVAMNNTYTQIKDTLDVMSRNHEEIEDNNFGSRYGSRRGNEEGFDKNAVTVLQGQITVMNNLLQSMAL
        C    E + + +F F L  D  + V TL V  +  + ++Y QIK TLD MS N +E +D  FGSR+  R   +EG DK+ V VLQGQ+  MNNLLQSM L
Subjt:  CRLSQEELCLTLFPFTLKDDAKKWVGTLEVRELVAMNNTYTQIKDTLDVMSRNHEEIEDNNFGSRYGSRRGNEEGFDKNAVTVLQGQITVMNNLLQSMAL

Query:  T
        +
Subjt:  T

A0A5A7SYS5 Uncharacterized protein3.5e-0753.03Show/hide
Query:  MNNTYTQIKDTLDVMSRNHEEIEDNNFGSRYGSRRGNEEGFDKNAVTVLQGQITVMNNLLQSMALT
        + ++  QIK TLD M+ N+EE +D++F S    R  NEEG D N V  LQGQ+TVMNNLLQS+ L+
Subjt:  MNNTYTQIKDTLDVMSRNHEEIEDNNFGSRYGSRRGNEEGFDKNAVTVLQGQITVMNNLLQSMALT

A0A5A7TNS8 Uncharacterized protein4.9e-1755.56Show/hide
Query:  MKPVMLQMIQTIGQFEGYLDKDPM--ITSRVFTGYALPFICRLSQEELCLTLFPFTLKDDAKKWVGTLEV-------------RELVAMNNTYTQIKDTL
        MKP ML MIQT  QF GYLD+DP   I S      +    C LSQE+L +T F FTLKDD KKWVGTLEV             R    M  TYTQIKDTL
Subjt:  MKPVMLQMIQTIGQFEGYLDKDPM--ITSRVFTGYALPFICRLSQEELCLTLFPFTLKDDAKKWVGTLEV-------------RELVAMNNTYTQIKDTL

Query:  DVMSRNHE
        D+MSRNHE
Subjt:  DVMSRNHE

A0A5D3DI10 Uncharacterized protein5.4e-0840.34Show/hide
Query:  MKPVMLQMIQTIGQFEGYLDKDPMITSRVFTGYALPFICRLSQEELCLTLFPFTLKDDAKKWVGTLE------------VRELVAMNNTYTQIKDTLDVM
        MK VMLQMIQT G       K  M+  R F  +                       D+A KWVGTLE             R    M+  YTQIKDTLD M
Subjt:  MKPVMLQMIQTIGQFEGYLDKDPMITSRVFTGYALPFICRLSQEELCLTLFPFTLKDDAKKWVGTLE------------VRELVAMNNTYTQIKDTLDVM

Query:  SRNHEEIEDNNFGSRYGSR
        SRNH++ EDNNFG  Y  R
Subjt:  SRNHEEIEDNNFGSRYGSR

A0A6J1EEI2 uncharacterized protein LOC1114333946.0e-0740.26Show/hide
Query:  MKPVMLQMIQTIGQFEGYLDKDPMITSRVFTGYALPF-ICRLSQEELCLTLFPFTLKDDAKKWVGTLEVRELVAMNN
        +KPVM QM+QTIGQF G   +DP +  + F G +  F   R+ ++ + L+LFP++L+D AK W+ TL +  + + N+
Subjt:  MKPVMLQMIQTIGQFEGYLDKDPMITSRVFTGYALPF-ICRLSQEELCLTLFPFTLKDDAKKWVGTLEVRELVAMNN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCTGTGATGCTTCAAATGATCCAAACTATAGGCCAATTTGAAGGATACCTAGACAAAGACCCCATGATCACATCAAGAGTTTTTACGGGATATGCTCTTCCTTT
TATCTGCCGGTTATCTCAAGAAGAACTCTGCCTCACTCTTTTCCCATTCACTCTCAAGGATGACGCAAAGAAGTGGGTAGGAACCTTAGAGGTTCGCGAGCTGGTGGCAA
TGAACAATACATACACTCAGATTAAGGATACGTTGGATGTGATGTCAAGGAATCACGAGGAAATAGAGGACAATAATTTTGGCTCGCGCTATGGAAGTAGGCGAGGGAAT
GAAGAAGGATTTGATAAGAATGCAGTAACAGTACTTCAAGGACAAATAACCGTGATGAACAACTTACTCCAATCAATGGCATTAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACCTGTGATGCTTCAAATGATCCAAACTATAGGCCAATTTGAAGGATACCTAGACAAAGACCCCATGATCACATCAAGAGTTTTTACGGGATATGCTCTTCCTTT
TATCTGCCGGTTATCTCAAGAAGAACTCTGCCTCACTCTTTTCCCATTCACTCTCAAGGATGACGCAAAGAAGTGGGTAGGAACCTTAGAGGTTCGCGAGCTGGTGGCAA
TGAACAATACATACACTCAGATTAAGGATACGTTGGATGTGATGTCAAGGAATCACGAGGAAATAGAGGACAATAATTTTGGCTCGCGCTATGGAAGTAGGCGAGGGAAT
GAAGAAGGATTTGATAAGAATGCAGTAACAGTACTTCAAGGACAAATAACCGTGATGAACAACTTACTCCAATCAATGGCATTAACATAG
Protein sequenceShow/hide protein sequence
MKPVMLQMIQTIGQFEGYLDKDPMITSRVFTGYALPFICRLSQEELCLTLFPFTLKDDAKKWVGTLEVRELVAMNNTYTQIKDTLDVMSRNHEEIEDNNFGSRYGSRRGN
EEGFDKNAVTVLQGQITVMNNLLQSMALT