; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009401 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009401
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr08:15740081..15743524
RNA-Seq ExpressionPI0009401
SyntenyPI0009401
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]8.8e-9431.32Show/hide
Query:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE
        MT +GNTSKALS+ GKRPNTRSRSRE QSSEDMPPFEVAK+IWE++SKPPKGGI+IKEN  I+EH S SE  +EE+P PNIMS+MVTDVDTSEDRMA+LE
Subjt:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE

Query:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNM +K +EERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ------------------------------------------------------------------------------------------------SLIQ
                                                                                                        SLIQ
Subjt:  ------------------------------------------------------------------------------------------------SLIQ

Query:  FGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTRRKKQKQNYSKKESRLYREYK-----------------------------------
        FGSLE +VIYSSPE LQ ND R   PKEE K V+N ++GWTLVTRRKK+KQ++S+KES  YR Y+                                   
Subjt:  FGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTRRKKQKQNYSKKESRLYREYK-----------------------------------

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Query:  -----------------------------------------------------------RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPA
                                                                    KGT+K EQ  IT+KKS + + L  ++N +  T+TK   P 
Subjt:  -----------------------------------------------------------RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPA

Query:  KESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFT
         E IA  +++ S  PVLRYIPLSRRKKGESPFAE S+NL V   EILKE+F  PLTK++KG AK+IEK+ LEA LPE+RT EGF+PKAYKLMAKAGYDFT
Subjt:  KESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFT

Query:  TRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTK
        TRTE KS KIFDER  LSPTQ KLQKQGY IPNSR  +GY+SSEPVRITGKGK KVA+TCHITV+     K+ +K +
Subjt:  TRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTK

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]7.5e-8528.51Show/hide
Query:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE
        MT +GNTSKALS+ GKRPNTRSRSRE QSSEDMPPFEVAK+IW+++SKPPKGGI+IKEN  I+EH S SE S+EE+P PNIMS+MVTDVDTSEDRM  LE
Subjt:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE

Query:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNM +KA+EERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ----------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTRRKKQKQNYSKKESRLYREYK---------------------
                  SLIQFGSLEPVVIYSSPE LQ ND RA  PKEE K V+N ++GWTLVTRRKK+KQ++S+KES  YR Y+                     
Subjt:  ----------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTRRKKQKQNYSKKESRLYREYK---------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  -------------------------------------------------------------------------RKGTYKPEQGTITTKKSKEVNVLKGRK
                                                                                  KGT+K EQ  IT+KKS + + L  ++
Subjt:  -------------------------------------------------------------------------RKGTYKPEQGTITTKKSKEVNVLKGRK

Query:  NDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDP
        N ++ T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPF E S+NL V   EILKE+FT PLTK++KG AK+IEK+ L+A LPE+RT EGFDP
Subjt:  NDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDP

Query:  KAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTK
        KAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQGY IPNSR  +GY+SSEPVRITGKGKAKVA+TCHITV+     ++ +K +
Subjt:  KAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTK

TYK06199.1 uncharacterized protein E5676_scaffold287G00570 [Cucumis melo var. makuwa]8.8e-8631.74Show/hide
Query:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE
        MT++GNTSKALS+  KRPNTRSRSRE QSSEDMPPFEVAK+IWE++SKPPKGG++IK+N  I+EH S SE S+EE P PNIMS+M               
Subjt:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE

Query:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
                A+EERD+EIA L+NHI+SRDAAESSHT+T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ---------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTR
                                                           SLIQFGSLEPVVIYSS + LQ ND RA  PKEE K V+N ++GWTLVTR
Subjt:  ---------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTR

Query:  RKKQKQNYSKKESRLYREYK--------------------------------------------------------------------------------
        R K+KQ++S+KES  YR Y+                                                                                
Subjt:  RKKQKQNYSKKESRLYREYK--------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------RKGTYKPEQGTITTKKSKEVNVLKGRK
                                                                                  KGT+K EQ  IT+KKS + + L  ++
Subjt:  -------------------------------------------------------------------------RKGTYKPEQGTITTKKSKEVNVLKGRK

Query:  NDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDP
        N +   +TK   P  E IA  Q++ S  PVL YIP SR KKGESPFAE  +NL V   EILKE+FT PLTK++KG AK+IEK+ LEA LPE+RT +GFDP
Subjt:  NDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDP

Query:  KAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVK
        KAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQGY IPNSR  +GY SSEPVRITGKGK KVA+TCHITV+
Subjt:  KAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVK

TYK06432.1 uncharacterized protein E5676_scaffold163G001350 [Cucumis melo var. makuwa]2.6e-8533.37Show/hide
Query:  MPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELEKKVNMLLKAIEERDYEIASLRNHIESRDAAES
        MPPFEVAK+IWE++SKP KGG++IKEN  I+EH S SE S+EE+P PN MS+MVTDVDTSE RMAELEKKVNML+KA+EERD+EIA L+NHI+SRDAAES
Subjt:  MPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELEKKVNMLLKAIEERDYEIASLRNHIESRDAAES

Query:  SHTYTTKNKDKGKTILQES---------------------------------------------------------------------------------
        SHT+T KN +KGK I+QES                                                                                 
Subjt:  SHTYTTKNKDKGKTILQES---------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKH
                                                                        SLIQFGSLEPVVIYSSPE LQ  D RA  PKEE K 
Subjt:  ----------------------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKH

Query:  VENADKGWTLVTRRK--------------------------------------------------KQKQN------------------------------
        V+N ++GWTL T  K                                                  +QK N                              
Subjt:  VENADKGWTLVTRRK--------------------------------------------------KQKQN------------------------------

Query:  ----------------------------------------------------------------------------------YSKKES-----RLYREYK
                                                                                          ++K ES     + Y + +
Subjt:  ----------------------------------------------------------------------------------YSKKES-----RLYREYK

Query:  ------------RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEIL
                     KGT+K E+  IT+KKS + + L  ++N +  T+TK   P  E IA  Q+K S PPVLRYIPLSRRKKGESPFAE S+NL V   EIL
Subjt:  ------------RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEIL

Query:  KESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVR
        KE+FT PLTK++KG AK+I+K++LEA L E+RT EGFDPKAYKLMAK GYDFT RTE KS KIFDER  LSPTQ+KLQKQGY IPNSR E+GY+S EPVR
Subjt:  KESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVR

Query:  ITGKGKAKVADTCHITVK
        ITGKGKAKVA+TCHITV+
Subjt:  ITGKGKAKVADTCHITVK

TYK18071.1 uncharacterized protein E5676_scaffold306G004020 [Cucumis melo var. makuwa]6.1e-8729.43Show/hide
Query:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE
        M  +GNTSKA S+  KRPNTRSRSR+ QSSEDMPPFEVAK+IWE++SKPPKGGI+IKEN  I+EH S  E S+EE   PNIMS+MVTDVDTSEDRMAELE
Subjt:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE

Query:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNML+KA+EERD+ IA  +NHIESRDAAESSHT T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  --------------------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVE
                                                                      SLIQFGSLEPVVIYSSPE LQ ND RA  PKEE K V+
Subjt:  --------------------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVE

Query:  NADKGWTLVTRRKKQKQNYSKKESRLYREYK---------------------------------------------------------------------
        N ++GWTLVTRRKK+KQ++S+KES  YR Y+                                                                     
Subjt:  NADKGWTLVTRRKKQKQNYSKKESRLYREYK---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  -------------------------RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAE
                                  KGT+K EQ  IT+KKS + + L  ++N ++ T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPF E
Subjt:  -------------------------RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAE

Query:  NSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNS
         S+NL V   EILKE+FT PLTK++KG AK+IEK+ L+A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQGY IPNS
Subjt:  NSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNS

Query:  RPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTK
        R  +GY+SSEPVRITGKGKAKVA+TCHITV+     ++ +K +
Subjt:  RPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTK

TrEMBL top hitse value%identityAlignment
A0A5A7UJR2 Reverse transcriptase4.3e-9431.32Show/hide
Query:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE
        MT +GNTSKALS+ GKRPNTRSRSRE QSSEDMPPFEVAK+IWE++SKPPKGGI+IKEN  I+EH S SE  +EE+P PNIMS+MVTDVDTSEDRMA+LE
Subjt:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE

Query:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNM +K +EERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------------------------SLIQ
                                                                                                        SLIQ
Subjt:  ------------------------------------------------------------------------------------------------SLIQ

Query:  FGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTRRKKQKQNYSKKESRLYREYK-----------------------------------
        FGSLE +VIYSSPE LQ ND R   PKEE K V+N ++GWTLVTRRKK+KQ++S+KES  YR Y+                                   
Subjt:  FGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTRRKKQKQNYSKKESRLYREYK-----------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  -----------------------------------------------------------RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPA
                                                                    KGT+K EQ  IT+KKS + + L  ++N +  T+TK   P 
Subjt:  -----------------------------------------------------------RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPA

Query:  KESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFT
         E IA  +++ S  PVLRYIPLSRRKKGESPFAE S+NL V   EILKE+F  PLTK++KG AK+IEK+ LEA LPE+RT EGF+PKAYKLMAKAGYDFT
Subjt:  KESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFT

Query:  TRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTK
        TRTE KS KIFDER  LSPTQ KLQKQGY IPNSR  +GY+SSEPVRITGKGK KVA+TCHITV+     K+ +K +
Subjt:  TRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTK

A0A5D3BIH8 Uncharacterized protein3.6e-8528.51Show/hide
Query:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE
        MT +GNTSKALS+ GKRPNTRSRSRE QSSEDMPPFEVAK+IW+++SKPPKGGI+IKEN  I+EH S SE S+EE+P PNIMS+MVTDVDTSEDRM  LE
Subjt:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE

Query:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNM +KA+EERD+EIA L+NHIESRDAAESSHT+T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
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Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTRRKKQKQNYSKKESRLYREYK---------------------
                  SLIQFGSLEPVVIYSSPE LQ ND RA  PKEE K V+N ++GWTLVTRRKK+KQ++S+KES  YR Y+                     
Subjt:  ----------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTRRKKQKQNYSKKESRLYREYK---------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------RKGTYKPEQGTITTKKSKEVNVLKGRK
                                                                                  KGT+K EQ  IT+KKS + + L  ++
Subjt:  -------------------------------------------------------------------------RKGTYKPEQGTITTKKSKEVNVLKGRK

Query:  NDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDP
        N ++ T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPF E S+NL V   EILKE+FT PLTK++KG AK+IEK+ L+A LPE+RT EGFDP
Subjt:  NDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDP

Query:  KAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTK
        KAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQGY IPNSR  +GY+SSEPVRITGKGKAKVA+TCHITV+     ++ +K +
Subjt:  KAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTK

A0A5D3C5A6 RNase H domain-containing protein1.2e-8533.37Show/hide
Query:  MPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELEKKVNMLLKAIEERDYEIASLRNHIESRDAAES
        MPPFEVAK+IWE++SKP KGG++IKEN  I+EH S SE S+EE+P PN MS+MVTDVDTSE RMAELEKKVNML+KA+EERD+EIA L+NHI+SRDAAES
Subjt:  MPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELEKKVNMLLKAIEERDYEIASLRNHIESRDAAES

Query:  SHTYTTKNKDKGKTILQES---------------------------------------------------------------------------------
        SHT+T KN +KGK I+QES                                                                                 
Subjt:  SHTYTTKNKDKGKTILQES---------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKH
                                                                        SLIQFGSLEPVVIYSSPE LQ  D RA  PKEE K 
Subjt:  ----------------------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKH

Query:  VENADKGWTLVTRRK--------------------------------------------------KQKQN------------------------------
        V+N ++GWTL T  K                                                  +QK N                              
Subjt:  VENADKGWTLVTRRK--------------------------------------------------KQKQN------------------------------

Query:  ----------------------------------------------------------------------------------YSKKES-----RLYREYK
                                                                                          ++K ES     + Y + +
Subjt:  ----------------------------------------------------------------------------------YSKKES-----RLYREYK

Query:  ------------RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEIL
                     KGT+K E+  IT+KKS + + L  ++N +  T+TK   P  E IA  Q+K S PPVLRYIPLSRRKKGESPFAE S+NL V   EIL
Subjt:  ------------RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEIL

Query:  KESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVR
        KE+FT PLTK++KG AK+I+K++LEA L E+RT EGFDPKAYKLMAK GYDFT RTE KS KIFDER  LSPTQ+KLQKQGY IPNSR E+GY+S EPVR
Subjt:  KESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVR

Query:  ITGKGKAKVADTCHITVK
        ITGKGKAKVA+TCHITV+
Subjt:  ITGKGKAKVADTCHITVK

A0A5D3C783 Ribonuclease H4.3e-8631.74Show/hide
Query:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE
        MT++GNTSKALS+  KRPNTRSRSRE QSSEDMPPFEVAK+IWE++SKPPKGG++IK+N  I+EH S SE S+EE P PNIMS+M               
Subjt:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE

Query:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
                A+EERD+EIA L+NHI+SRDAAESSHT+T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ---------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTR
                                                           SLIQFGSLEPVVIYSS + LQ ND RA  PKEE K V+N ++GWTLVTR
Subjt:  ---------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTR

Query:  RKKQKQNYSKKESRLYREYK--------------------------------------------------------------------------------
        R K+KQ++S+KES  YR Y+                                                                                
Subjt:  RKKQKQNYSKKESRLYREYK--------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------RKGTYKPEQGTITTKKSKEVNVLKGRK
                                                                                  KGT+K EQ  IT+KKS + + L  ++
Subjt:  -------------------------------------------------------------------------RKGTYKPEQGTITTKKSKEVNVLKGRK

Query:  NDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDP
        N +   +TK   P  E IA  Q++ S  PVL YIP SR KKGESPFAE  +NL V   EILKE+FT PLTK++KG AK+IEK+ LEA LPE+RT +GFDP
Subjt:  NDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDP

Query:  KAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVK
        KAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQGY IPNSR  +GY SSEPVRITGKGK KVA+TCHITV+
Subjt:  KAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVK

A0A5D3D1E5 Ribonuclease H3.0e-8729.43Show/hide
Query:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE
        M  +GNTSKA S+  KRPNTRSRSR+ QSSEDMPPFEVAK+IWE++SKPPKGGI+IKEN  I+EH S  E S+EE   PNIMS+MVTDVDTSEDRMAELE
Subjt:  MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELE

Query:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------
        KKVNML+KA+EERD+ IA  +NHIESRDAAESSHT T KN +KGK I+QES                                                 
Subjt:  KKVNMLLKAIEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQES-------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVE
                                                                      SLIQFGSLEPVVIYSSPE LQ ND RA  PKEE K V+
Subjt:  --------------------------------------------------------------SLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVE

Query:  NADKGWTLVTRRKKQKQNYSKKESRLYREYK---------------------------------------------------------------------
        N ++GWTLVTRRKK+KQ++S+KES  YR Y+                                                                     
Subjt:  NADKGWTLVTRRKKQKQNYSKKESRLYREYK---------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAE
                                  KGT+K EQ  IT+KKS + + L  ++N ++ T+TK   P  E IA  Q++ S PPVLRYIPLSRRKKGESPF E
Subjt:  -------------------------RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAE

Query:  NSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNS
         S+NL V   EILKE+FT PLTK++KG AK+IEK+ L+A LPE+RT EGFDPKAYKLMAKAGYDFTTRTE KS KIFDER  LSPTQ+KLQKQGY IPNS
Subjt:  NSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKESLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKS-KIFDERHGLSPTQRKLQKQGYFIPNS

Query:  RPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTK
        R  +GY+SSEPVRITGKGKAKVA+TCHITV+     ++ +K +
Subjt:  RPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTCAAAGGCAACACTTCCAAAGCTCTAAGCAACACCGGAAAGAGGCCAAATACTCGCAGCCGCTCAAGGGAGGCCCAATCGTCTGAAGACATGCCACCCTTTGA
GGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAAGAAAATTCTGTGATTGAGGAGCACGGTTCGTCTTCTGAAAGCTCAAGTG
AGGAGATGCCTCACCCAAATATAATGTCGATTATGGTGACTGATGTCGATACGAGTGAAGATAGAATGGCGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAAGCGATT
GAAGAAAGGGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAAT
TTTGCAGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAGAAAAATGACATCCGAGCTGTTCACCCAAAAGAAG
AAGGAAAGCACGTGGAGAATGCTGACAAGGGATGGACGCTAGTCACGCGTCGAAAAAAACAAAAACAAAATTACTCTAAAAAAGAGTCTCGCTTGTACCGAGAGTATAAA
AGAAAGGGCACTTATAAGCCCGAGCAAGGAACGATCACAACAAAAAAGTCAAAGGAAGTGAATGTACTCAAGGGTCGAAAGAATGATAAAATAGCGACCCAAACTAAGTC
TGAAGTGCCGGCAAAAGAAAGTATAGCGATTCCTCAAGAAAAAGCCTCAAAACCTCCCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTG
CAGAAAATTCACAAAATTTGGCGGTTGGAGGTGTCGAAATATTAAAGGAAAGTTTTACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAG
AGCCTAGAAGCATGCCTTCCAGAAAAACGAACGACGGAAGGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACCGAGTTCAA
AAGCAAGATATTTGATGAAAGGCATGGGCTTTCTCCTACGCAAAGGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGAAGTTGGGTATAAGTCTTCCG
AGCCTGTTCGAATAACTGGTAAAGGAAAAGCAAAAGTTGCTGACACATGCCACATTACTGTGAAGAATGTAACGATTCTAAAGAAGACAAGAAAAACGAAAGTCAAAGAA
GTTCTGTTTTTGATCGCATCACCTCCTCTACTGCACACTCTTCAGTTTTCCAGAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATTCAAAGGCAACACTTCCAAAGCTCTAAGCAACACCGGAAAGAGGCCAAATACTCGCAGCCGCTCAAGGGAGGCCCAATCGTCTGAAGACATGCCACCCTTTGA
GGTCGCAAAGAGTATCTGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAAGAAAATTCTGTGATTGAGGAGCACGGTTCGTCTTCTGAAAGCTCAAGTG
AGGAGATGCCTCACCCAAATATAATGTCGATTATGGTGACTGATGTCGATACGAGTGAAGATAGAATGGCGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAAGCGATT
GAAGAAAGGGATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAAT
TTTGCAGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAGAAAAATGACATCCGAGCTGTTCACCCAAAAGAAG
AAGGAAAGCACGTGGAGAATGCTGACAAGGGATGGACGCTAGTCACGCGTCGAAAAAAACAAAAACAAAATTACTCTAAAAAAGAGTCTCGCTTGTACCGAGAGTATAAA
AGAAAGGGCACTTATAAGCCCGAGCAAGGAACGATCACAACAAAAAAGTCAAAGGAAGTGAATGTACTCAAGGGTCGAAAGAATGATAAAATAGCGACCCAAACTAAGTC
TGAAGTGCCGGCAAAAGAAAGTATAGCGATTCCTCAAGAAAAAGCCTCAAAACCTCCCGTTTTACGTTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTG
CAGAAAATTCACAAAATTTGGCGGTTGGAGGTGTCGAAATATTAAAGGAAAGTTTTACCACGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAG
AGCCTAGAAGCATGCCTTCCAGAAAAACGAACGACGGAAGGATTCGATCCAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACCGAGTTCAA
AAGCAAGATATTTGATGAAAGGCATGGGCTTTCTCCTACGCAAAGGAAGCTTCAAAAGCAAGGATATTTTATACCAAATTCAAGACCAGAAGTTGGGTATAAGTCTTCCG
AGCCTGTTCGAATAACTGGTAAAGGAAAAGCAAAAGTTGCTGACACATGCCACATTACTGTGAAGAATGTAACGATTCTAAAGAAGACAAGAAAAACGAAAGTCAAAGAA
GTTCTGTTTTTGATCGCATCACCTCCTCTACTGCACACTCTTCAGTTTTCCAGAGATTGA
Protein sequenceShow/hide protein sequence
MTFKGNTSKALSNTGKRPNTRSRSREAQSSEDMPPFEVAKSIWEELSKPPKGGIIIKENSVIEEHGSSSESSSEEMPHPNIMSIMVTDVDTSEDRMAELEKKVNMLLKAI
EERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKTILQESSLIQFGSLEPVVIYSSPEVLQKNDIRAVHPKEEGKHVENADKGWTLVTRRKKQKQNYSKKESRLYREYK
RKGTYKPEQGTITTKKSKEVNVLKGRKNDKIATQTKSEVPAKESIAIPQEKASKPPVLRYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTTPLTKMDKGGAKRIEKE
SLEACLPEKRTTEGFDPKAYKLMAKAGYDFTTRTEFKSKIFDERHGLSPTQRKLQKQGYFIPNSRPEVGYKSSEPVRITGKGKAKVADTCHITVKNVTILKKTRKTKVKE
VLFLIASPPLLHTLQFSRD