; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009409 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009409
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRING-type domain-containing protein
Genome locationchr05:20740524..20741033
RNA-Seq ExpressionPI0009409
SyntenyPI0009409
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061653.1 zf-C3HC4_3 domain-containing protein [Cucumis melo var. makuwa]1.4e-8997.63Show/hide
Query:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE
        MERAN GRRWANLKQRLGLKGMGCC GSWSPTSSTLTMIEGFSLS HGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE
Subjt:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE

Query:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
        MDGGDWKTKRKE ENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
Subjt:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

KAG6589274.1 hypothetical protein SDJN03_17839, partial [Cucurbita argyrosperma subsp. sororia]1.1e-7687.06Show/hide
Query:  MERANGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFE
        MER N G+RWANLKQRLGL KGMGCCGGSWS TSSTLTMI+G  LSRHGSSRS R+DG RSSAASGMNLAMALAAERNL ++EGGPT   +VKSLMRLFE
Subjt:  MERANGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFE

Query:  EMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
        E+DGGDWKT+RKESENNGDW+CCVCMERSKGAAFIPCGHTFCRVCSRELWLN GTCPICSRSIIEILDIF
Subjt:  EMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

KGN47968.1 hypothetical protein Csa_002927 [Cucumis sativus]1.1e-8694.67Show/hide
Query:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE
        MERAN  RRW NL+QRLGLKGMGCC GSWSPTSSTLTMIEGFSLS HGSSRSQ EDGGRSSAASGMNLAMALAAERNLR+DEGGPTG SDVKSLMRLFEE
Subjt:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE

Query:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
        MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
Subjt:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

XP_022953088.1 RNA-binding protein MEX3B-like [Cucurbita moschata]1.7e-8794.08Show/hide
Query:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE
        MER NGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEG SLSRHGSSRS REDG RSSA+SG+NLAMALAAERNLR+DEGGPTGA DVKSLMRLFEE
Subjt:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE

Query:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
        MDGGDWKTKRKESEN GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Subjt:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

XP_023531397.1 uncharacterized protein LOC111793648 [Cucurbita pepo subsp. pepo]1.1e-7687.06Show/hide
Query:  MERANGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFE
        MER N G+RWANLKQRLGL KGMGCCGGSWS TSSTLTMI+G  LSRHGSSRS R+DG RSSAASGMNLAMALAAERNL ++EGGPT   +VKSLMRLFE
Subjt:  MERANGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFE

Query:  EMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
        E+DGGDWKT+RKESENNGDW+CCVCMERSKGAAFIPCGHTFCRVCSRELWLN GTCPICSRSIIEILDIF
Subjt:  EMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

TrEMBL top hitse value%identityAlignment
A0A0A0KEL6 RING-type domain-containing protein5.4e-8794.67Show/hide
Query:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE
        MERAN  RRW NL+QRLGLKGMGCC GSWSPTSSTLTMIEGFSLS HGSSRSQ EDGGRSSAASGMNLAMALAAERNLR+DEGGPTG SDVKSLMRLFEE
Subjt:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE

Query:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
        MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
Subjt:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

A0A5A7V0I3 Zf-C3HC4_3 domain-containing protein6.8e-9097.63Show/hide
Query:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE
        MERAN GRRWANLKQRLGLKGMGCC GSWSPTSSTLTMIEGFSLS HGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE
Subjt:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE

Query:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
        MDGGDWKTKRKE ENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
Subjt:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

A0A6J1EWQ9 uncharacterized protein LOC1114372261.8e-7485.29Show/hide
Query:  MERANGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFE
        MER N G+RWANLKQRLGL KG+GCCGGSWS TSSTLTMI+G  LSRHGSSRS R+DG RSSAASGMNLAMALAAERNL ++EGGPT   +VKSL+RLFE
Subjt:  MERANGGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFE

Query:  EMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
        E+DGGDWKT+RKESENNGDW+CCVCMERSKGAAFIPCGHTFCRVCSREL LN GTCPICSRSIIEILDIF
Subjt:  EMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

A0A6J1GME5 RNA-binding protein MEX3B-like8.4e-8894.08Show/hide
Query:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE
        MER NGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEG SLSRHGSSRS REDG RSSA+SG+NLAMALAAERNLR+DEGGPTGA DVKSLMRLFEE
Subjt:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE

Query:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
        MDGGDWKTKRKESEN GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Subjt:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

A0A6J1HXI8 RNA-binding protein MEX3B-like8.4e-8894.08Show/hide
Query:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE
        MER NGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEG SLSRHGSSRS REDG RSSA+SG+NLAMALAAERNLR+DEGGPTGA DVKSLMRLFEE
Subjt:  MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEE

Query:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
        MDGGDWKTKRKESEN GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Subjt:  MDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

SwissProt top hitse value%identityAlignment
O35445 E3 ubiquitin-protein ligase RNF59.4e-0431.94Show/hide
Query:  MRLFEEMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWL----NRGTCPICSRSI
        M   EE DGG     R+    +  + C +C+E ++ A    CGH +C  C  + WL    +R  CP+C   I
Subjt:  MRLFEEMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWL----NRGTCPICSRSI

P43254 E3 ubiquitin-protein ligase COP13.2e-0432.81Show/hide
Query:  EEMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSI
        E  DGG   ++    + + D +C +CM+  K A    CGH+FC +C      N+  CP CS+ +
Subjt:  EEMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSI

Q5M807 E3 ubiquitin-protein ligase RNF59.4e-0431.94Show/hide
Query:  MRLFEEMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWL----NRGTCPICSRSI
        M   EE DGG     R+    +  + C +C+E ++ A    CGH +C  C  + WL    +R  CP+C   I
Subjt:  MRLFEEMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWL----NRGTCPICSRSI

Arabidopsis top hitse value%identityAlignment
AT1G62370.1 RING/U-box superfamily protein1.4e-2642.16Show/hide
Query:  ERANGGRR----WANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQRE-------DGGRS------SAASGMNLAMALAAERNLRSDEGG
        ++ NGG R    W  LKQRL    +GCCG    P +  L   E   +        + +       D G        +  S  NLA ALA ER     E  
Subjt:  ERANGGRR----WANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQRE-------DGGRS------SAASGMNLAMALAAERNLRSDEGG

Query:  PTGASDVKSLMRLFEEMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
         T  + V  LMRL  E DG D  T    +    D +CCVCM R KGAAFIPCGHT+CRVCSRE+W+NRGTCP+C+RSI ++LD++
Subjt:  PTGASDVKSLMRLFEEMDGGDWKTKRKESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

AT3G25030.1 RING/U-box superfamily protein7.1e-2339.44Show/hide
Query:  WANLKQRLGLKGMGCCGGSWSPTSSTLTMIE---------GFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVK----SLMR
        W +L+++L LK  G    S +   S  T I          GF LS  G+   +      SS    + L   LA ER L + E       +V+    SLM 
Subjt:  WANLKQRLGLKGMGCCGGSWSPTSSTLTMIE---------GFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVK----SLMR

Query:  LFEEMDGG-DWKTKRKESENN------GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
        L EE +G   + +   E+E         +  CCVCM RSKGAAFIPCGHTFCR+CSRELW+ RG CP+C+ +I+E+LD+F
Subjt:  LFEEMDGG-DWKTKRKESENN------GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

AT3G25030.2 RING/U-box superfamily protein7.1e-2339.44Show/hide
Query:  WANLKQRLGLKGMGCCGGSWSPTSSTLTMIE---------GFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVK----SLMR
        W +L+++L LK  G    S +   S  T I          GF LS  G+   +      SS    + L   LA ER L + E       +V+    SLM 
Subjt:  WANLKQRLGLKGMGCCGGSWSPTSSTLTMIE---------GFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVK----SLMR

Query:  LFEEMDGG-DWKTKRKESENN------GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
        L EE +G   + +   E+E         +  CCVCM RSKGAAFIPCGHTFCR+CSRELW+ RG CP+C+ +I+E+LD+F
Subjt:  LFEEMDGG-DWKTKRKESENN------GDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

AT4G03965.1 RING/U-box superfamily protein6.4e-3248.59Show/hide
Query:  RRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSR-SQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGA-SDVK-SLMRLFEEMDGG
        RR   LK+RLG K +GCCG +W      LT   G        +R     D        GMNLA ALAAERN R++E   +G+ + +K SLMRL EE    
Subjt:  RRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSR-SQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGA-SDVK-SLMRLFEEMDGG

Query:  DWKTKRKESEN------------NGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
            +  E+E             N D +CCVCM R KGAAFIPCGHTFCRVCSRE+WLNRG+CP+C+R IIEILDI+
Subjt:  DWKTKRKESEN------------NGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF

AT4G22250.1 RING/U-box superfamily protein1.6e-3046.89Show/hide
Query:  RRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDG----GRSSAASGMNLAMALAAERNLR--SDEGGPTGASDVKSLMRLFEEM
        RR   LK+RL  K +GCCG +W+   +  T +   +         Q E G        + +GMNLA AL AER  R  S E          SLMRL EE 
Subjt:  RRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDG----GRSSAASGMNLAMALAAERNLR--SDEGGPTGASDVKSLMRLFEEM

Query:  DGGDWKTKRKESE---------NNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF
                 KE+E            D +CCVCM R KGAAFIPCGHTFCRVCSRELWLNRG+CP+C+R IIEILDIF
Subjt:  DGGDWKTKRKESE---------NNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCGGGCTAATGGAGGGCGGAGATGGGCCAATTTAAAGCAACGGTTAGGATTGAAGGGGATGGGGTGCTGTGGAGGTTCATGGAGTCCAACATCGTCAACTTTGAC
AATGATTGAAGGGTTTAGCTTAAGCCGCCATGGAAGTAGCCGCAGCCAAAGAGAAGATGGGGGTCGGAGCTCGGCAGCTTCCGGTATGAACTTGGCGATGGCTCTGGCGG
CGGAGAGAAATTTGAGGAGTGATGAAGGAGGCCCCACCGGCGCTAGTGATGTGAAATCACTGATGAGATTGTTTGAAGAAATGGACGGTGGGGATTGGAAAACAAAAAGA
AAGGAAAGTGAGAATAACGGTGATTGGATGTGCTGCGTGTGCATGGAAAGGAGTAAAGGCGCGGCTTTTATTCCCTGTGGACACACCTTCTGTAGGGTATGTTCTAGGGA
ATTATGGCTTAACAGAGGCACGTGTCCCATTTGCAGCCGTTCGATAATTGAGATTCTTGACATTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCGGGCTAATGGAGGGCGGAGATGGGCCAATTTAAAGCAACGGTTAGGATTGAAGGGGATGGGGTGCTGTGGAGGTTCATGGAGTCCAACATCGTCAACTTTGAC
AATGATTGAAGGGTTTAGCTTAAGCCGCCATGGAAGTAGCCGCAGCCAAAGAGAAGATGGGGGTCGGAGCTCGGCAGCTTCCGGTATGAACTTGGCGATGGCTCTGGCGG
CGGAGAGAAATTTGAGGAGTGATGAAGGAGGCCCCACCGGCGCTAGTGATGTGAAATCACTGATGAGATTGTTTGAAGAAATGGACGGTGGGGATTGGAAAACAAAAAGA
AAGGAAAGTGAGAATAACGGTGATTGGATGTGCTGCGTGTGCATGGAAAGGAGTAAAGGCGCGGCTTTTATTCCCTGTGGACACACCTTCTGTAGGGTATGTTCTAGGGA
ATTATGGCTTAACAGAGGCACGTGTCCCATTTGCAGCCGTTCGATAATTGAGATTCTTGACATTTTTTAA
Protein sequenceShow/hide protein sequence
MERANGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGFSLSRHGSSRSQREDGGRSSAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKR
KESENNGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF