; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009412 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009412
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description50S ribosomal protein L16, chloroplastic
Genome locationtig00000638:61648..62007
RNA-Seq ExpressionPI0009412
SyntenyPI0009412
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABI97454.1 ribosomal protein L16, partial [Cucumis sativus]2.2e-6099.16Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYE+SGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

ASY96370.1 ribosomal protein L16 [Cucumis melo subsp. agrestis]2.2e-6099.16Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYE+SGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

QHB76001.1 ribosomal protein L16 [Cucumis melo subsp. melo]9.7e-61100Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

YP_004841821.1 ribosomal protein L16 [Cucumis melo subsp. melo]2.2e-6099.16Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYE+SGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

YP_009431594.1 ribosomal protein L16 [Citrullus amarus]3.7e-6099.16Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGN ICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

TrEMBL top hitse value%identityAlignment
A0A1S4EU42 50S ribosomal protein L16, chloroplastic1.0e-6099.16Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYE+SGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

A0A1X9Q1F7 50S ribosomal protein L16, chloroplastic (Fragment)1.0e-6099.16Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYE+SGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

A0A218KG73 50S ribosomal protein L16, chloroplastic1.0e-6099.16Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYE+SGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

A0A249S030 50S ribosomal protein L16, chloroplastic1.0e-6099.16Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYE+SGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

A0A6B9M9R9 50S ribosomal protein L16, chloroplastic4.7e-61100Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

SwissProt top hitse value%identityAlignment
B1NWI7 50S ribosomal protein L16, chloroplastic1.7e-6094.12Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGI++RGN ICFGRYA+QALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYE+ GVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFI SG
Subjt:  AISIAASKMPIRTQFITSG

Q09ME0 50S ribosomal protein L16, chloroplastic2.7e-6195.8Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGN ICFGRYA+QALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYE+SGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFI SG
Subjt:  AISIAASKMPIRTQFITSG

Q0ZIY1 50S ribosomal protein L16, chloroplastic1.7e-6094.12Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGN ICFGRYA+QALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKPGRILYE+ GVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFI SG
Subjt:  AISIAASKMPIRTQFITSG

Q2L940 50S ribosomal protein L16, chloroplastic1.3e-6094.12Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGN ICFGRYA+QALEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RPTETRMGSGKGSPEYWVAVVKPGRILYE+SGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPI+TQFI SG
Subjt:  AISIAASKMPIRTQFITSG

Q4VZN1 50S ribosomal protein L16, chloroplastic2.8e-6399.16Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYE+SGVAENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITSG
        AISIAASKMPIRTQFITSG
Subjt:  AISIAASKMPIRTQFITSG

Arabidopsis top hitse value%identityAlignment
AT2G28830.1 PLANT U-BOX 122.0e-4069.23Show/hide
Query:  KGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARKA
        KG+S +G  IC  RYA+Q LEPAWITSRQIEAGRRAMTRN  RG  + V IF DKPVT+RP ETRMG GKG+P +WVAVVKPG+I+YE+ GV+E +AR+A
Subjt:  KGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARKA

Query:  ISIAASKMPIRTQFITS
        ISIAASK+P +T+FI S
Subjt:  ISIAASKMPIRTQFITS

ATCG00790.1 ribosomal protein L164.1e-5788.14Show/hide
Query:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK
        +KGIS RGN ICFGRYA+Q LEPAWITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSPEYWVAVVKPG+ILYE+ GV ENIARK
Subjt:  MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARK

Query:  AISIAASKMPIRTQFITS
        AISIAASKMPI+TQFI S
Subjt:  AISIAASKMPIRTQFITS

ATMG00080.1 ribosomal protein L162.8e-2142.28Show/hide
Query:  KGISYRGNSICFGRYAIQALEPAWITSRQIEAGR--------RAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGV
        +G    G  + FGRY  ++ +   ++ R IEA R        RAM+   RR GKIWVR+F D P+T +PTE RMG GKG+P  W+A V  G+I +E+ GV
Subjt:  KGISYRGNSICFGRYAIQALEPAWITSRQIEAGR--------RAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGV

Query:  AENIARKAISIAASKMPIRTQFI
        +   AR+A ++AA K    T+F+
Subjt:  AENIARKAISIAASKMPIRTQFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGAATATCTTATCGAGGCAATAGTATTTGCTTCGGGAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCCGGACGAAGGGC
AATGACACGAAATGCACGACGCGGTGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCC
CCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATAAGTGGAGTAGCCGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCATCCAAAATGCCT
ATACGAACCCAATTCATTACTTCGGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGAATATCTTATCGAGGCAATAGTATTTGCTTCGGGAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATCTAGACAAATCGAAGCCGGACGAAGGGC
AATGACACGAAATGCACGACGCGGTGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCCACAGAAACACGTATGGGTTCAGGGAAAGGATCCC
CCGAATATTGGGTAGCTGTTGTTAAACCAGGTAGAATACTTTATGAAATAAGTGGAGTAGCCGAAAATATAGCCAGAAAAGCTATTTCAATAGCGGCATCCAAAATGCCT
ATACGAACCCAATTCATTACTTCGGGATAG
Protein sequenceShow/hide protein sequence
MKGISYRGNSICFGRYAIQALEPAWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPTETRMGSGKGSPEYWVAVVKPGRILYEISGVAENIARKAISIAASKMP
IRTQFITSG