; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009414 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009414
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:8047278..8048022
RNA-Seq ExpressionPI0009414
SyntenyPI0009414
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044843.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-5153.62Show/hide
Query:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD
        MC  +CSGF WNDE KCII EKE+FD+W        +G L KSF HYD+L YV GKD  TG R E+F D+GSN    Y+ F AD   + +   MYS GL+
Subjt:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD

Query:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM
        MS DD+M TR  R  E R  S+ SKRKR G  ++   I+R A+EY N+QL  IAEWS +Q QDA+ T  E+VRQL+ I E +++DR R MRI++RNVDDM
Subjt:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM

Query:  KALLDVP
        KA L+VP
Subjt:  KALLDVP

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]8.2e-5354.19Show/hide
Query:  SCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLDMSSD
        +CSGF WNDE KCI+ EKE+FD+WV+   + + G L KSFPHYD+L YV  KD  TG R E+F DVGSN    Y+ F A+  ++ +   MYS+GL+MS D
Subjt:  SCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLDMSSD

Query:  DIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDMKALL
        ++MGTR  R  E R  S+ SK+KRGG T++   I+R A+EY N+QL  IAEW  +QRQDA+ T  EVVRQL+ I E +++DR R MRIL+ NV+DMKA L
Subjt:  DIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDMKALL

Query:  DVP
        +VP
Subjt:  DVP

KAA0050782.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-5154.11Show/hide
Query:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD
        M D +CSGF WNDE KCII EKE+FD+WVK   + + G L KSF HYD+L YV GKD  TG R E+F D+GSN    Y+ F AD   + +   MYS GL+
Subjt:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD

Query:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM
        MS DD+M TR  R  E R  S+ SK KR G   +   I+R A+EY N+QL  IAEW  +QRQDA+ T  E+VRQL+ I E +++DR R MRI++RNVDDM
Subjt:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM

Query:  KALLDVP
        KA L VP
Subjt:  KALLDVP

KAA0063726.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-5155.07Show/hide
Query:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD
        MC   CSGF WNDE KCI+ EKE+FD+WVK   + + G L KSF HYD+L YV GKD  TG RVE+F +V SN    Y+ F  D   + +   MYSQGL+
Subjt:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD

Query:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM
        MS DD+MGTR  R  E R  S+ SKRKR G   +   I+R A+EY N+QL  IAEW  +QRQ+AS T  EVVRQL+ I E  ++DR R M IL+ NVDDM
Subjt:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM

Query:  KALLDVP
        KA LDVP
Subjt:  KALLDVP

KAA0067287.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-5154.11Show/hide
Query:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD
        MCD +CS F WNDE KC++ EKE+F +WV   S+ +   L KSFPHYD+L YV GKD  T  + ETF DV  N    YE F+AD   + +   MY+QGL+
Subjt:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD

Query:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM
        MS D++MGTR  R  E R  SN S+RKRG Q     ++IR A+EY N+QL  IAE   +QRQDAS T  EVVRQL+ I E +++DR R MRIL+RNVDDM
Subjt:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM

Query:  KALLDVP
        KA LD+P
Subjt:  KALLDVP

TrEMBL top hitse value%identityAlignment
A0A5A7TMW5 Retrotransposon protein7.5e-5253.62Show/hide
Query:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD
        MC  +CSGF WNDE KCII EKE+FD+W        +G L KSF HYD+L YV GKD  TG R E+F D+GSN    Y+ F AD   + +   MYS GL+
Subjt:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD

Query:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM
        MS DD+M TR  R  E R  S+ SKRKR G  ++   I+R A+EY N+QL  IAEWS +Q QDA+ T  E+VRQL+ I E +++DR R MRI++RNVDDM
Subjt:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM

Query:  KALLDVP
        KA L+VP
Subjt:  KALLDVP

A0A5A7TZA5 Retrotransposon protein4.0e-5354.19Show/hide
Query:  SCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLDMSSD
        +CSGF WNDE KCI+ EKE+FD+WV+   + + G L KSFPHYD+L YV  KD  TG R E+F DVGSN    Y+ F A+  ++ +   MYS+GL+MS D
Subjt:  SCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLDMSSD

Query:  DIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDMKALL
        ++MGTR  R  E R  S+ SK+KRGG T++   I+R A+EY N+QL  IAEW  +QRQDA+ T  EVVRQL+ I E +++DR R MRIL+ NV+DMKA L
Subjt:  DIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDMKALL

Query:  DVP
        +VP
Subjt:  DVP

A0A5A7U4M2 Retrotransposon protein7.5e-5254.11Show/hide
Query:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD
        M D +CSGF WNDE KCII EKE+FD+WVK   + + G L KSF HYD+L YV GKD  TG R E+F D+GSN    Y+ F AD   + +   MYS GL+
Subjt:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD

Query:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM
        MS DD+M TR  R  E R  S+ SK KR G   +   I+R A+EY N+QL  IAEW  +QRQDA+ T  E+VRQL+ I E +++DR R MRI++RNVDDM
Subjt:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM

Query:  KALLDVP
        KA L VP
Subjt:  KALLDVP

A0A5A7VBC5 Retrotransposon protein5.7e-5255.07Show/hide
Query:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD
        MC   CSGF WNDE KCI+ EKE+FD+WVK   + + G L KSF HYD+L YV GKD  TG RVE+F +V SN    Y+ F  D   + +   MYSQGL+
Subjt:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD

Query:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM
        MS DD+MGTR  R  E R  S+ SKRKR G   +   I+R A+EY N+QL  IAEW  +QRQ+AS T  EVVRQL+ I E  ++DR R M IL+ NVDDM
Subjt:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM

Query:  KALLDVP
        KA LDVP
Subjt:  KALLDVP

A0A5A7VJD7 Retrotransposon protein9.8e-5254.11Show/hide
Query:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD
        MCD +CS F WNDE KC++ EKE+F +WV   S+ +   L KSFPHYD+L YV GKD  T  + ETF DV  N    YE F+AD   + +   MY+QGL+
Subjt:  MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLD

Query:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM
        MS D++MGTR  R  E R  SN S+RKRG Q     ++IR A+EY N+QL  IAE   +QRQDAS T  EVVRQL+ I E +++DR R MRIL+RNVDDM
Subjt:  MSSDDIMGTRPNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDM

Query:  KALLDVP
        KA LD+P
Subjt:  KALLDVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGACGCGTCGTGCAGTGGGTTCGATTGGAACGATGAAGTCAAGTGCATTATCGTTGAGAAGGAACTATTCGACAATTGGGTGAAGGTAGAGTCATCCTGCCGCCA
AGGGCCTCTTAAAAAATCTTTTCCCCATTACGATGACTTGTGCTACGTATTGGGGAAAGATAGTGTGACGGGAGCGCGTGTGGAGACATTCACCGATGTGGGGTCGAATG
TGTCCGGGTGGTACGAGAGATTTCTTGCTGATGATCACAACAACATGGAGATCCTTACAATGTATAGTCAAGGACTAGACATGTCATCTGACGACATCATGGGCACACGA
CCCAATCGCTCAGGTGAGTGTAGGACTGGTTCAAACGAGTCAAAGAGGAAACGGGGAGGTCAGACGTTAGAAATGGCGAAAATTATTCGCAATGCAATGGAATATGTGAA
TGACCAATTGAAGGCCATTGCAGAATGGTCGAATGTACAACGCCAAGATGCAAGCGCAACATGTGCGGAGGTCGTTAGACAGTTGCAGGGAATCCTTGAACAGAGTATAT
TGGACAGGGTTCGTTGTATGCGCATATTGCTGCGCAATGTGGATGACATGAAAGCATTATTGGACGTCCCATGGCAACTTTTGGTTTCAACTGTGATATTTCTAGTTTTT
AATTCTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCGACGCGTCGTGCAGTGGGTTCGATTGGAACGATGAAGTCAAGTGCATTATCGTTGAGAAGGAACTATTCGACAATTGGGTGAAGGTAGAGTCATCCTGCCGCCA
AGGGCCTCTTAAAAAATCTTTTCCCCATTACGATGACTTGTGCTACGTATTGGGGAAAGATAGTGTGACGGGAGCGCGTGTGGAGACATTCACCGATGTGGGGTCGAATG
TGTCCGGGTGGTACGAGAGATTTCTTGCTGATGATCACAACAACATGGAGATCCTTACAATGTATAGTCAAGGACTAGACATGTCATCTGACGACATCATGGGCACACGA
CCCAATCGCTCAGGTGAGTGTAGGACTGGTTCAAACGAGTCAAAGAGGAAACGGGGAGGTCAGACGTTAGAAATGGCGAAAATTATTCGCAATGCAATGGAATATGTGAA
TGACCAATTGAAGGCCATTGCAGAATGGTCGAATGTACAACGCCAAGATGCAAGCGCAACATGTGCGGAGGTCGTTAGACAGTTGCAGGGAATCCTTGAACAGAGTATAT
TGGACAGGGTTCGTTGTATGCGCATATTGCTGCGCAATGTGGATGACATGAAAGCATTATTGGACGTCCCATGGCAACTTTTGGTTTCAACTGTGATATTTCTAGTTTTT
AATTCTATTTGA
Protein sequenceShow/hide protein sequence
MCDASCSGFDWNDEVKCIIVEKELFDNWVKVESSCRQGPLKKSFPHYDDLCYVLGKDSVTGARVETFTDVGSNVSGWYERFLADDHNNMEILTMYSQGLDMSSDDIMGTR
PNRSGECRTGSNESKRKRGGQTLEMAKIIRNAMEYVNDQLKAIAEWSNVQRQDASATCAEVVRQLQGILEQSILDRVRCMRILLRNVDDMKALLDVPWQLLVSTVIFLVF
NSI