; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009451 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009451
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr03:12007500..12008255
RNA-Seq ExpressionPI0009451
SyntenyPI0009451
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG49237.1 hypothetical protein EZV62_025112 [Acer yangbiense]2.4e-4550.51Show/hide
Query:  RYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNRAYVG
        ++DI+ FDG GDF +W+ K+KA+L QQK LK +  P+KLP+ LT E K+ M     G+IILNLSDNVLRE+ D++TA  +WKKL+ L   K+  N+ Y+ 
Subjt:  RYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNRAYVG

Query:  DRLFTFKMDSRKSLTENLGEFKKLSTYFKNLG--DKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF
        +RLF FKMD+ K L +NL +FKK++    N G  +K+SDENE+ ILLNSL D+ K++K A+KY R  + ++  IS +K+KEL+L  +KK   NGE LF
Subjt:  DRLFTFKMDSRKSLTENLGEFKKLSTYFKNLG--DKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF

TYK27723.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.1e-4843.1Show/hide
Query:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR
        M   +++IE FDG GDFTL  ++I A LG QKALK L DPK+LP  LT+ ++ET+E     ++I+N++DNVLR+VI++ T +  W+ L  L + K+  N+
Subjt:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR

Query:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF
         ++ ++LF+FKM+  K+L ENL EFKKL+       +K+  E+E+ IL+N + D +KE+K +LKY R+ I +++VI+ +K+KEL+L T+ K     E LF
Subjt:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF

Query:  SKGKG---KSSSKETKKQKKKSKLECTFCHKKGHLRQDC
        SKG     K+S+K  +  + K  L+C  CHK+GH +++C
Subjt:  SKGKG---KSSSKETKKQKKKSKLECTFCHKKGHLRQDC

XP_038885928.1 uncharacterized protein LOC120076236 [Benincasa hispida]3.3e-5044.22Show/hide
Query:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR
        M   RY+IE F+ K DF LWK KIK +L +QKAL  + DP K P+ L + +KET+E+   G+I+LN+ D+VLR+++D+ TAY +W KL+++   K+ PN+
Subjt:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR

Query:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF
        A++ +R FT+KMD  KSLT+NL EFK LS+ F+++GD I +ENE+FILLNSL +  K++K ALKY R++I    +IS +  KEL+L   KK Q  GEG F
Subjt:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF

Query:  SKGKGKSSSKETKKQKKKSKLECTFCHKKGHLRQDCFFLKKRQNQKKQKEK
         KG  K+  +  +  +      C     +  +++DC+ LK++ NQ+ +  K
Subjt:  SKGKGKSSSKETKKQKKKSKLECTFCHKKGHLRQDCFFLKKRQNQKKQKEK

XP_038887098.1 uncharacterized protein LOC120077280 [Benincasa hispida]2.8e-4953.76Show/hide
Query:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR
        MA  +Y+IE FD K DF L K KIKA+LGQQKAL  + DP K PE L++ +KET+E+   G+IILN++D+VLR+++DQ T Y +W KL+E+   K+ PN+
Subjt:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR

Query:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKL
         ++ +R FT+KMD  KSLT+NL EFK+LS+ F+++GD I +ENE+FIL NSL +  K++K ALKY RK+I ID +IS ++ KEL+L
Subjt:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKL

XP_038890043.1 uncharacterized protein LOC120079747 [Benincasa hispida]1.5e-5554.29Show/hide
Query:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR
        MA  RY+IE FD K DF LWK KIK +LGQQKAL  + DP K PE LT+ +KET+E    G+I+LN++DNVLR+VI+Q TAY +W KL+E+   K+  N+
Subjt:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR

Query:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF
        A++ +R FT+KMD+ KSLT+ L EFK+LS+ F+++G  I +ENE+FILLNSL ++ K+ K A+KY R++I  + +IS ++ +EL+L   KKGQ  GEGLF
Subjt:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF

Query:  SKGKGKSSSK
        SKGK K+S K
Subjt:  SKGKGKSSSK

TrEMBL top hitse value%identityAlignment
A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-942.0e-4542.55Show/hide
Query:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR
        M   +++IE FDG GDFTLW ++I AILG QKALK L DPK+LP  LT+ ++ET+E     ++I+N++DNVLR+VI++ TA+  W+KL  L + K+ PN+
Subjt:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR

Query:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF
         ++ ++LF+FK +  K+L ENL EFKKL+      G+K+  ENE+ IL+NS+ D +KE+K  LKY R+ I +++VI+T+K+KEL+L T+ K         
Subjt:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF

Query:  SKGKGKSSSKETKKQKKKSKLECTFCHKKGHLRQD
        +  +GK+  ++  ++ +    E  F   + H R+D
Subjt:  SKGKGKSSSKETKKQKKKSKLECTFCHKKGHLRQD

A0A5C7GXL9 Sucrose-phosphate phosphatase1.2e-4550.51Show/hide
Query:  RYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNRAYVG
        ++DI+ FDG GDF +W+ K+KA+L QQK LK +  P+KLP+ LT E K+ M     G+IILNLSDNVLRE+ D++TA  +WKKL+ L   K+  N+ Y+ 
Subjt:  RYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNRAYVG

Query:  DRLFTFKMDSRKSLTENLGEFKKLSTYFKNLG--DKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF
        +RLF FKMD+ K L +NL +FKK++    N G  +K+SDENE+ ILLNSL D+ K++K A+KY R  + ++  IS +K+KEL+L  +KK   NGE LF
Subjt:  DRLFTFKMDSRKSLTENLGEFKKLSTYFKNLG--DKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF

A0A5C7HB65 gag_pre-integrs domain-containing protein7.6e-4547.51Show/hide
Query:  RYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNRAYVG
        ++DI+ FDG GDF +W+ K+KA+L QQK LK +  P+KLP+ LT E K+ M     G+IILNLSDNVLRE+ D++TA  +WKKL+ L   K+  N+ Y+ 
Subjt:  RYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNRAYVG

Query:  DRLFTFKMDSRKSLTENLGEFKKLSTYFKNLG--DKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLFSK
        +RLF FKMD+ K L +NL +FKK++    N G  +K+SDENE+ ILLNSL D+ K++K A+KY R  + ++  IS +K+KEL+L  +KK   NGE LF +
Subjt:  DRLFTFKMDSRKSLTENLGEFKKLSTYFKNLG--DKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLFSK

Query:  GK------GKSSSKETKKQKK
        G+        +S+ +TK + K
Subjt:  GK------GKSSSKETKKQKK

A0A5C7I661 Uncharacterized protein1.2e-4550.51Show/hide
Query:  RYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNRAYVG
        ++DI+ FDG GDF +W+ K+KA+L QQK LK +  P+KLP+ LT E K+ M     G+IILNLSDNVLRE+ D++TA  +WKKL+ L   K+  N+ Y+ 
Subjt:  RYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNRAYVG

Query:  DRLFTFKMDSRKSLTENLGEFKKLSTYFKNLG--DKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF
        +RLF FKMD+ K L +NL +FKK++    N G  +K+SDENE+ ILLNSL D+ K++K A+KY R  + ++  IS +K+KEL+L  +KK   NGE LF
Subjt:  DRLFTFKMDSRKSLTENLGEFKKLSTYFKNLG--DKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF

A0A5D3DVM0 Retrovirus-related Pol polyprotein from transposon TNT 1-945.1e-4943.1Show/hide
Query:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR
        M   +++IE FDG GDFTL  ++I A LG QKALK L DPK+LP  LT+ ++ET+E     ++I+N++DNVLR+VI++ T +  W+ L  L + K+  N+
Subjt:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR

Query:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF
         ++ ++LF+FKM+  K+L ENL EFKKL+       +K+  E+E+ IL+N + D +KE+K +LKY R+ I +++VI+ +K+KEL+L T+ K     E LF
Subjt:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF

Query:  SKGKG---KSSSKETKKQKKKSKLECTFCHKKGHLRQDC
        SKG     K+S+K  +  + K  L+C  CHK+GH +++C
Subjt:  SKGKG---KSSSKETKKQKKKSKLECTFCHKKGHLRQDC

SwissProt top hitse value%identityAlignment
P04146 Copia protein6.5e-0926.77Show/hide
Query:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR
        M  A+ +I+ FDG+  + +WK +I+A+L +Q  LKV+     +P ++    K+  E     +II  LSD+ L       TA  + + LD + + K+  ++
Subjt:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR

Query:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSL----------LDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKK
          +  RL + K+ S  SL  +   F +L +     G KI + ++   LL +L          ++   E  + L +V+ +++       IK K    +T K
Subjt:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSL----------LDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKK

Query:  KGQ----VNGEGLFSKGKGKSSSKETKKQKK---KSKLECTFCHKKGHLRQDCFFLKKRQNQK-KQKEK
        K       N    +     K+   + KK  K   K K++C  C ++GH+++DCF  K+  N K K+ EK
Subjt:  KGQ----VNGEGLFSKGKGKSSSKETKKQKK---KSKLECTFCHKKGHLRQDCFFLKKRQNQK-KQKEK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-2428.63Show/hide
Query:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR
        M+  +Y++  F+G   F+ W+ +++ +L QQ   KVL    K P+ +  ED   ++     +I L+LSD+V+  +ID++TA G+W +L+ L   K   N+
Subjt:  MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNR

Query:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF
         Y+  +L+   M    +   +L  F  L T   NLG KI +E+++ +LLNSL  ++  +   + + +  I + +V S +   E     +KK +  G+ L 
Subjt:  AYVGDRLFTFKMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLF

Query:  SKGKGKSSSKETK---------KQKKKSK---LECTFCHKKGHLRQDC
        ++G+G+S  + +          K K +SK     C  C++ GH ++DC
Subjt:  SKGKGKSSSKETK---------KQKKKSK---LECTFCHKKGHLRQDC

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTAGCAAGATACGATATTGAGAATTTTGATGGTAAGGGAGATTTTACCTTGTGGAAAGAAAAGATTAAGGCTATACTTGGCCAACAAAAGGCATTGAAAGTCCT
CATGGATCCAAAGAAGCTACCTGAAAAATTGACTCAAGAAGATAAAGAAACTATGGAAAATGCAGTTGATGGTTCTATAATTTTAAACCTAAGTGACAATGTCCTTAGGG
AAGTCATTGATCAAGAGACGGCTTATGGAATGTGGAAGAAGTTGGATGAACTCTGTCAACCCAAGAACACACCAAATCGTGCATACGTAGGGGATAGGTTATTTACCTTC
AAAATGGATAGTAGAAAATCACTAACAGAAAATCTTGGAGAATTCAAGAAACTGTCAACATATTTCAAAAACTTGGGAGACAAGATTAGTGATGAAAATGAATCGTTCAT
TTTGCTAAACTCACTTCTAGATGCACACAAAGAAATCAAAATGGCTCTCAAATATGTAAGGAAAAAAATCATCATCGATAATGTCATTTCAACAATCAAAACTAAAGAAT
TAAAGTTGAATACTAAAAAAAAGGGTCAAGTCAATGGTGAAGGGCTATTCTCAAAAGGAAAGGGCAAAAGTAGTTCTAAAGAGACTAAAAAACAAAAGAAAAAGTCTAAA
CTTGAATGCACCTTTTGCCATAAAAAGGGACATCTTAGACAAGATTGTTTCTTCCTAAAGAAAAGGCAAAATCAGAAAAAGCAAAAAGAAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTAGCAAGATACGATATTGAGAATTTTGATGGTAAGGGAGATTTTACCTTGTGGAAAGAAAAGATTAAGGCTATACTTGGCCAACAAAAGGCATTGAAAGTCCT
CATGGATCCAAAGAAGCTACCTGAAAAATTGACTCAAGAAGATAAAGAAACTATGGAAAATGCAGTTGATGGTTCTATAATTTTAAACCTAAGTGACAATGTCCTTAGGG
AAGTCATTGATCAAGAGACGGCTTATGGAATGTGGAAGAAGTTGGATGAACTCTGTCAACCCAAGAACACACCAAATCGTGCATACGTAGGGGATAGGTTATTTACCTTC
AAAATGGATAGTAGAAAATCACTAACAGAAAATCTTGGAGAATTCAAGAAACTGTCAACATATTTCAAAAACTTGGGAGACAAGATTAGTGATGAAAATGAATCGTTCAT
TTTGCTAAACTCACTTCTAGATGCACACAAAGAAATCAAAATGGCTCTCAAATATGTAAGGAAAAAAATCATCATCGATAATGTCATTTCAACAATCAAAACTAAAGAAT
TAAAGTTGAATACTAAAAAAAAGGGTCAAGTCAATGGTGAAGGGCTATTCTCAAAAGGAAAGGGCAAAAGTAGTTCTAAAGAGACTAAAAAACAAAAGAAAAAGTCTAAA
CTTGAATGCACCTTTTGCCATAAAAAGGGACATCTTAGACAAGATTGTTTCTTCCTAAAGAAAAGGCAAAATCAGAAAAAGCAAAAAGAAAAATAG
Protein sequenceShow/hide protein sequence
MAVARYDIENFDGKGDFTLWKEKIKAILGQQKALKVLMDPKKLPEKLTQEDKETMENAVDGSIILNLSDNVLREVIDQETAYGMWKKLDELCQPKNTPNRAYVGDRLFTF
KMDSRKSLTENLGEFKKLSTYFKNLGDKISDENESFILLNSLLDAHKEIKMALKYVRKKIIIDNVISTIKTKELKLNTKKKGQVNGEGLFSKGKGKSSSKETKKQKKKSK
LECTFCHKKGHLRQDCFFLKKRQNQKKQKEK