| GenBank top hits | e value | %identity | Alignment |
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| WP_009242071.1 MULTISPECIES: type IV secretion system DNA-binding domain-containing protein [Betaproteobacteria] | 1.5e-54 | 39.62 | Show/hide |
Query: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
+KSETLHTLFAGAQGTGKSQQFF ALM++VRARGK M+VYDPTGEFTQAFYRE I
Subjt: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
Query: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
NRD A+AKSNL+ MHALL+GTAG +D + QN D +S SI + +T
Subjt: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
Query: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
+ + ++ AIKAVL+LE IH+ERLWFCIDELPTL + DF + + +R+
Subjt: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
Query: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
GA+AKLLAEL+GQAEV EK+E+LSYG S+ RDGVS+ R MRDLVLTSEILT + L +PGDY I RV+YGY P EK A GF+E G FKP
Subjt: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
Query: RGSL-------SVGEVERP
+ S EV++P
Subjt: RGSL-------SVGEVERP
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| WP_011798637.1 type IV secretion system DNA-binding domain-containing protein [Acidovorax sp. JS42] | 1.5e-54 | 39.62 | Show/hide |
Query: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
+KSETLHTLFAGAQGTGKSQQFF ALM++VRARGK M+VYDPTGEFTQAFYRE I
Subjt: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
Query: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
NRD A+AKSNL+ MHALL+GTAG +D + QN D +S SI + +T
Subjt: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
Query: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
+ + ++ AIKAVL+LE IH+ERLWFCIDELPTL + DF + + +R+
Subjt: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
Query: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
GA+AKLLAEL+GQAEV EK+E+LSYG S+ RDGVS+ R MRDLVLTSEILT + L +PGDY I RV+YGY P EK A GF+E G FKP
Subjt: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
Query: RGSL-------SVGEVERP
+ S EV++P
Subjt: RGSL-------SVGEVERP
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| WP_038314818.1 type IV secretion system DNA-binding domain-containing protein [Comamonas sp. NyZ500] | 2.0e-54 | 40.5 | Show/hide |
Query: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
+KSETLHTLFAGAQGTGKSQQFF ALM++VRARGK M+VYDPTGEFTQAFYRE I
Subjt: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
Query: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
NRD A+AKSNL+ MHALL+GTAG +D + QN D +S SI + +T
Subjt: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
Query: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
+ + ++ AIKAVL+LE IH+ERLWFCIDELPTL + DF + + +R+
Subjt: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
Query: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
GA+AKLLAEL+GQAEV EK+E+LSYG S+ RDGVS+ R MRDLVLTSEILT + L +PGDY I RV+YGY P EK A GF+E G FKP
Subjt: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
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| WP_086929254.1 type IV secretion system DNA-binding domain-containing protein [Acidovorax carolinensis] | 2.0e-54 | 40.5 | Show/hide |
Query: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
+KSETLHTLFAGAQGTGKSQQFF ALM++VRARGK M+VYDPTGEFTQAFYRE I
Subjt: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
Query: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
NRD A+AKSNL+ MHALL+GTAG +D + QN D +S SI + +T
Subjt: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
Query: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
+ + ++ AIKAVL+LE IH+ERLWFCIDELPTL + DF + + +R+
Subjt: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
Query: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
GA+AKLLAEL+GQAEV EK+E+LSYG S+ RDGVS+ R MRDLVLTSEILT + L +PGDY I RV+YGY P EK A GF+E G FKP
Subjt: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
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| WP_217021595.1 type IV secretion system DNA-binding domain-containing protein [Burkholderia multivorans] | 2.0e-54 | 40.5 | Show/hide |
Query: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
+KSETLHTLFAGAQGTGKSQQFF ALM++VRARGK M+VYDPTGEFTQAFYRE I
Subjt: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
Query: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
NRD A+AKSNL+ MHALL+GTAG +D + QN D +S SI + +T
Subjt: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
Query: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
+ + ++ AIKAVL+LE IH+ERLWFCIDELPTL + DF + + +R+
Subjt: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
Query: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
GA+AKLLAEL+GQAEV EK+E+LSYG S+ RDGVS+ R MRDLVLTSEILT + L +PGDY I RV+YGY P EK A GF+E G FKP
Subjt: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A240UKP4 Type VI secretion protein | 9.6e-55 | 40.5 | Show/hide |
Query: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
+KSETLHTLFAGAQGTGKSQQFF ALM++VRARGK M+VYDPTGEFTQAFYRE I
Subjt: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
Query: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
NRD A+AKSNL+ MHALL+GTAG +D + QN D +S SI + +T
Subjt: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
Query: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
+ + ++ AIKAVL+LE IH+ERLWFCIDELPTL + DF + + +R+
Subjt: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
Query: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
GA+AKLLAEL+GQAEV EK+E+LSYG S+ RDGVS+ R MRDLVLTSEILT + L +PGDY I RV+YGY P EK A GF+E G FKP
Subjt: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
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| A0A7I8HQJ3 Type IV secretion system DNA-binding domain-containing protein | 2.1e-54 | 40.25 | Show/hide |
Query: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
+KSETLHTLFAGAQGTGKSQQFF ALM++VR+RGK M+VYDPTGEFTQAFYRE I
Subjt: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
Query: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
NRD A+AKSNL+ MHALL+GTAG +D + QN D +S SI + +T
Subjt: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
Query: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
+ + ++ AIKAVL+LE IH+ERLWFCIDELPTL + DF + + +R+
Subjt: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
Query: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
GA+AKLLAEL+GQAEV EK+E+LSYG S+ RDGVS+ R MRDLVLTSEILT + L +PGDY I RV+YGY P EK A GF+E G FKP
Subjt: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
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| A1WDH0 TraD | 7.4e-55 | 39.62 | Show/hide |
Query: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
+KSETLHTLFAGAQGTGKSQQFF ALM++VRARGK M+VYDPTGEFTQAFYRE I
Subjt: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
Query: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
NRD A+AKSNL+ MHALL+GTAG +D + QN D +S SI + +T
Subjt: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
Query: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
+ + ++ AIKAVL+LE IH+ERLWFCIDELPTL + DF + + +R+
Subjt: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
Query: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
GA+AKLLAEL+GQAEV EK+E+LSYG S+ RDGVS+ R MRDLVLTSEILT + L +PGDY I RV+YGY P EK A GF+E G FKP
Subjt: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
Query: RGSL-------SVGEVERP
+ S EV++P
Subjt: RGSL-------SVGEVERP
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| F4GGS9 Type IV secretion system, TraD, DNA-binding domain protein | 7.4e-55 | 39.62 | Show/hide |
Query: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
+KSETLHTLFAGAQGTGKSQQFF ALM++VRARGK M+VYDPTGEFTQAFYRE I
Subjt: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
Query: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
NRD A+AKSNL+ MHALL+GTAG +D + QN D +S SI + +T
Subjt: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
Query: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
+ + ++ AIKAVL+LE IH+ERLWFCIDELPTL + DF + + +R+
Subjt: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
Query: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
GA+AKLLAEL+GQAEV EK+E+LSYG S+ RDGVS+ R MRDLVLTSEILT + L +PGDY I RV+YGY P EK A GF+E G FKP
Subjt: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
Query: RGSL-------SVGEVERP
+ S EV++P
Subjt: RGSL-------SVGEVERP
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| U3G7M6 Type IV conjugative transfer system coupling protein TraD | 7.4e-55 | 39.62 | Show/hide |
Query: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
+KSETLHTLFAGAQGTGKSQQFF ALM++VRARGK M+VYDPTGEFTQAFYRE I
Subjt: MKSETLHTLFAGAQGTGKSQQFFVALMQEVRARGKPMVVYDPTGEFTQAFYREEMGI-------------------------------------------
Query: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
NRD A+AKSNL+ MHALL+GTAG +D + QN D +S SI + +T
Subjt: ---------------------NRDFVKAVAKSNLEEMHALLKGTAGLCGLDDGSHGN------LTQN---------DRSKSASI----------LLILTG
Query: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
+ + ++ AIKAVL+LE IH+ERLWFCIDELPTL + DF + + +R+
Subjt: GSVLHPQVGD-----LNIAIKAVLNLESIHQERLWFCIDELPTLPR-----------------------DFE---------------ARLKQDAKVRLVR
Query: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
GA+AKLLAEL+GQAEV EK+E+LSYG S+ RDGVS+ R MRDLVLTSEILT + L +PGDY I RV+YGY P EK A GF+E G FKP
Subjt: GASAKLLAELLGQAEVSEKEESLSYGPSAHRDGVSLFTHRAMRDLVLTSEILTRYE---GLFIPGDYLIVRVQYGYTPFEVEKGAEGFVEGGGLEAVFKP
Query: RGSL-------SVGEVERP
+ S EV++P
Subjt: RGSL-------SVGEVERP
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