; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009461 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009461
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionpentatricopeptide repeat-containing protein At4g18975, chloroplastic
Genome locationchr01:2218776..2226812
RNA-Seq ExpressionPI0009461
SyntenyPI0009461
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571702.1 Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. sororia]2.3e-12779.07Show/hide
Query:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---
        MLIRRFHRAA WATPLLR   VGQ MELGV+KLQ+G+SCYCTM+Q+QM K+ ADK    KDVNNSK L   SE+N GD+RKHQIG+NVSRK+K+ FL   
Subjt:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---

Query:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL
             DSKEA+YGALDAWVAWEQDFPIASLKHALA LEKE QWHR+VQVIKWMLSKGQGTTMNVYGQLIRALD DHRAEEAHKFWVM IGSDLHSVPWQL
Subjt:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM
        CRSMI+IYYRNKMLE+LVKLFKDLEAFGRKPPEKSIVQRVADACEMLGL+EEKERVLVKY YLF DE +GS+KKY        K KRK TKG +DNS LM
Subjt:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM

Query:  K
        K
Subjt:  K

XP_004136857.2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucumis sativus]1.9e-14586.42Show/hide
Query:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---
        MLIRR HRAAAWATPLLRHP VGQTMELGVS+LQVGSSCYCT IQDQMC+QLADK RK KDVN+SKALGHISEQN GD+RKHQIG+N+SRK+K+ FL   
Subjt:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---

Query:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL
             DSKEA+YGALDAWVAWEQDFPIA LKH LAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALD DHR EEAHKFWVM IGSDLHSVPWQ+
Subjt:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDEQGSMKKYKRISFEKSKRKRKLTKGTEDNSNLMK
        CRSM+AIYYRNK LE+LVKLFKDLEAFGRKPP+KSIVQRVADACEMLGLLEEKERVLVKYKYLFD+++G MKKYKRISFEKSKRKRK TKGTEDNSNL+K
Subjt:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDEQGSMKKYKRISFEKSKRKRKLTKGTEDNSNLMK

Query:  SQ
        S+
Subjt:  SQ

XP_008455250.1 PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucumis melo]1.2e-14486.75Show/hide
Query:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---
        MLIRRF+RAAAWATPLLRHP VG+TMELGVS+LQVG S YCTMIQDQM KQLADK RK+KDV+NSKALGHISEQN GD+RKH+IG+NVSRK+K++FL   
Subjt:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---

Query:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL
             DSKEA+YGALDAWVAWEQDFPIASLKH LAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALD DHRAEEAHKFWVM IGSDLHSVPWQL
Subjt:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDEQGSMKKYKRISFEKSKRKRKLTKGTEDNSNLMK
        CRSMIAIYYRNKMLE+LVKLFKDLEAFGRKPP+KSIVQRVADACEMLGLLEEKERVLVKYKYLFD++Q SMKKYKR+SFEK KRKRK TKG+EDNSNL+K
Subjt:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDEQGSMKKYKRISFEKSKRKRKLTKGTEDNSNLMK

Query:  SQ
        S+
Subjt:  SQ

XP_022967610.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucurbita maxima]1.0e-12779.07Show/hide
Query:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---
        MLIRRFHRAA WATPLLR   VGQ MELGV+KLQ+G+SCYCTM+Q+QM K+ ADK    KDVNNSK L   SE+N GD+RKHQIG+NVSRK+K+ FL   
Subjt:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---

Query:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL
             DSKEA+YGALDAWVAWEQDFPIASLKHALA LEKE QWHR+VQVIKWMLSKGQGTTMNVYGQLIRALD DHRAEEAHKFWVM IGSDLHSVPWQL
Subjt:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM
        CRSMI+IYYRNKMLE+LVKLFKDLEAFGRKPPEKSIVQRVADACEMLGL+EEKERVLVKY YLF DE +GS+KKY        K KRK TKG +DNS+LM
Subjt:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM

Query:  K
        K
Subjt:  K

XP_038887984.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Benincasa hispida]9.2e-13783.5Show/hide
Query:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---
        ML+RRFHRA AWATPLLR   VGQ MELGVS+LQVGS CYCTMIQDQM KQLA K  K+KD NNSKALG  SEQN GDVRKHQIG+NV RK+K+ FL   
Subjt:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---

Query:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL
             DSKEA+YGALDAWVAWEQDFPI SLKH L  LEKEQQWHR+VQVIKWMLSKGQGTTMNVYGQLIRALD DHRAEEAHKFWVM IGSDLHSVPWQL
Subjt:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM
        CRSMIAIYYRNKMLE+LVKLFKDLEAFGRKPPEKSIVQRVADACE+LGLLEEKERVL+KYKYLF DE +GS+KKYKR+SFEKSK KRK TK TEDNSNLM
Subjt:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM

Query:  KSQ
        K+Q
Subjt:  KSQ

TrEMBL top hitse value%identityAlignment
A0A1S3C174 pentatricopeptide repeat-containing protein At4g18975, chloroplastic5.8e-14586.75Show/hide
Query:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---
        MLIRRF+RAAAWATPLLRHP VG+TMELGVS+LQVG S YCTMIQDQM KQLADK RK+KDV+NSKALGHISEQN GD+RKH+IG+NVSRK+K++FL   
Subjt:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---

Query:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL
             DSKEA+YGALDAWVAWEQDFPIASLKH LAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALD DHRAEEAHKFWVM IGSDLHSVPWQL
Subjt:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDEQGSMKKYKRISFEKSKRKRKLTKGTEDNSNLMK
        CRSMIAIYYRNKMLE+LVKLFKDLEAFGRKPP+KSIVQRVADACEMLGLLEEKERVLVKYKYLFD++Q SMKKYKR+SFEK KRKRK TKG+EDNSNL+K
Subjt:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDEQGSMKKYKRISFEKSKRKRKLTKGTEDNSNLMK

Query:  SQ
        S+
Subjt:  SQ

A0A6J1DM10 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X17.9e-12676.9Show/hide
Query:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---
        ML+RRFHRA  W TPLLR    GQ M+LGVS+LQVG+SCYCTM+Q QMC+QLAD+  K+KDVNNSKAL   SEQN GD+RKHQIG+NVSRK+K+ FL   
Subjt:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---

Query:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL
              SKEA+YGALDAWVAWEQ+FPIASLK  LA LEKEQQWHR+VQVIKWMLSKGQGTTM VYGQLIRALD DHRAEE+HKFWVM IG+DLHSVPWQL
Subjt:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM
        CRSMI+IYYRNKML+NLVKLFKDLEAFGRKPPEKSIVQRVADA EMLGL EEKERVL KYK LF DE +G ++KY +ISFEKSKR+RKLTK ++DN +L 
Subjt:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM

Query:  KSQ
        K Q
Subjt:  KSQ

A0A6J1DNN5 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X37.9e-12676.9Show/hide
Query:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---
        ML+RRFHRA  W TPLLR    GQ M+LGVS+LQVG+SCYCTM+Q QMC+QLAD+  K+KDVNNSKAL   SEQN GD+RKHQIG+NVSRK+K+ FL   
Subjt:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---

Query:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL
              SKEA+YGALDAWVAWEQ+FPIASLK  LA LEKEQQWHR+VQVIKWMLSKGQGTTM VYGQLIRALD DHRAEE+HKFWVM IG+DLHSVPWQL
Subjt:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM
        CRSMI+IYYRNKML+NLVKLFKDLEAFGRKPPEKSIVQRVADA EMLGL EEKERVL KYK LF DE +G ++KY +ISFEKSKR+RKLTK ++DN +L 
Subjt:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM

Query:  KSQ
        K Q
Subjt:  KSQ

A0A6J1HGC4 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X15.5e-12778.41Show/hide
Query:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---
        MLIRRFHRAA WATPLLR   VGQ MELGV+KLQ+G+SCYCTM+Q+QM K+  DK    KDVNNSK L   SE+N GD+RKHQIG+NVSRK+K+ FL   
Subjt:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---

Query:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL
             DSKEA+YGALDAWVAWEQDFPIASLKHALA LEKE QWHR+VQVIKWMLSKGQGTTMNVYGQLIRALD DHRAEEAHKFWVM IGSDLHSVPWQL
Subjt:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM
        CRSMI+IYYRNKMLE+LVKLFK+LEAFGRKPPEKSIVQRVADACEMLGL+EEKERVLVKY YLF DE +GS+KKY        K KRK TKG +DNS+LM
Subjt:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM

Query:  K
        K
Subjt:  K

A0A6J1HUZ4 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X14.9e-12879.07Show/hide
Query:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---
        MLIRRFHRAA WATPLLR   VGQ MELGV+KLQ+G+SCYCTM+Q+QM K+ ADK    KDVNNSK L   SE+N GD+RKHQIG+NVSRK+K+ FL   
Subjt:  MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL---

Query:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL
             DSKEA+YGALDAWVAWEQDFPIASLKHALA LEKE QWHR+VQVIKWMLSKGQGTTMNVYGQLIRALD DHRAEEAHKFWVM IGSDLHSVPWQL
Subjt:  -----DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM
        CRSMI+IYYRNKMLE+LVKLFKDLEAFGRKPPEKSIVQRVADACEMLGL+EEKERVLVKY YLF DE +GS+KKY        K KRK TKG +DNS+LM
Subjt:  CRSMIAIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDE-QGSMKKYKRISFEKSKRKRKLTKGTEDNSNLM

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic3.7e-3242.53Show/hide
Query:  DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMI
        + KEA+YGAL+ WVAWE +FPI +   AL  L K  QWHR++Q+ KWMLSKGQG TM  Y  L+ A D D RA+EA   W M++ +   S+P +L   MI
Subjt:  DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMI

Query:  AIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKE----RVLVKYKYL-FDDEQGSMKKY
        A+Y  + + + ++++F D+E     P E S  +RVA A   L   E ++    R L +YKY+ F+ E+  +K+Y
Subjt:  AIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKE----RVLVKYKYL-FDDEQGSMKKY

Q8LG95 Pentatricopeptide repeat-containing protein At4g211901.7e-2941.83Show/hide
Query:  KEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMIAI
        KE +YGALD+++AWE +FP+  +K AL  LE E++W +I+QV KWMLSKGQG TM  Y  L+ AL +D+R +EA + W  +    L   P +    MI+I
Subjt:  KEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMIAI

Query:  YYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKY
        YY+  M + L ++F D+E  G K P  +IV  V      L + ++ E+++ KY
Subjt:  YYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKERVLVKY

Arabidopsis top hitse value%identityAlignment
AT1G04590.1 BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1)1.4e-6953.03Show/hide
Query:  LQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL--------DSKEAIYGALDAWVAWEQDFPIASLKH
        L+V S  Y  +       +   K+   +D ++S   G     N  + RKHQIG+N+ +K+K+ FL        D+KEA+YGALDAWVAWE++FPIASLK 
Subjt:  LQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL--------DSKEAIYGALDAWVAWEQDFPIASLKH

Query:  ALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMIAIYYRNKMLENLVKLFKDLEAFGRKPP
         +A+LEKE QWHR+VQVIKW+LSKGQG TM  YGQLIRALD D RAEEAH  W   +G+DLHSVPWQLC  M+ IY+RN ML+ LVKLFKDLE++ RKPP
Subjt:  ALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMIAIYYRNKMLENLVKLFKDLEAFGRKPP

Query:  EKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDEQGSMKKYKRISFEKSKRKRKLTKGTEDNS
        +K IVQ VADA E+LG+L+EKERV+ KY +L      S  K  R S +K K + ++ + T + +
Subjt:  EKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDEQGSMKKYKRISFEKSKRKRKLTKGTEDNS

AT1G04590.2 BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4)5.7e-6852.43Show/hide
Query:  LQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL--------DSKEAIYGALDAWVAWEQDFPIASLKH
        L+V S  Y  +       +   K+   +D ++S   G     N  + RKHQIG+N+ +K+K+ FL        D+KEA+YGALDAWVAWE++FPIASLK 
Subjt:  LQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFL--------DSKEAIYGALDAWVAWEQDFPIASLKH

Query:  ALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMIAIYYRNKMLENLV---KLFKDLEAFGR
         +A+LEKE QWHR+VQVIKW+LSKGQG TM  YGQLIRALD D RAEEAH  W   +G+DLHSVPWQLC  M+ IY+RN ML+ LV   KLFKDLE++ R
Subjt:  ALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMIAIYYRNKMLENLV---KLFKDLEAFGR

Query:  KPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDEQGSMKKYKRISFEKSKRKRKLTKGTEDNS
        KPP+K IVQ VADA E+LG+L+EKERV+ KY +L      S  K  R S +K K + ++ + T + +
Subjt:  KPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDEQGSMKKYKRISFEKSKRKRKLTKGTEDNS

AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein2.7e-3342.53Show/hide
Query:  DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMI
        + KEA+YGAL+ WVAWE +FPI +   AL  L K  QWHR++Q+ KWMLSKGQG TM  Y  L+ A D D RA+EA   W M++ +   S+P +L   MI
Subjt:  DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMI

Query:  AIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKE----RVLVKYKYL-FDDEQGSMKKY
        A+Y  + + + ++++F D+E     P E S  +RVA A   L   E ++    R L +YKY+ F+ E+  +K+Y
Subjt:  AIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKE----RVLVKYKYL-FDDEQGSMKKY

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein2.7e-3342.53Show/hide
Query:  DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMI
        + KEA+YGAL+ WVAWE +FPI +   AL  L K  QWHR++Q+ KWMLSKGQG TM  Y  L+ A D D RA+EA   W M++ +   S+P +L   MI
Subjt:  DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMI

Query:  AIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKE----RVLVKYKYL-FDDEQGSMKKY
        A+Y  + + + ++++F D+E     P E S  +RVA A   L   E ++    R L +YKY+ F+ E+  +K+Y
Subjt:  AIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKE----RVLVKYKYL-FDDEQGSMKKY

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein2.7e-3342.53Show/hide
Query:  DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMI
        + KEA+YGAL+ WVAWE +FPI +   AL  L K  QWHR++Q+ KWMLSKGQG TM  Y  L+ A D D RA+EA   W M++ +   S+P +L   MI
Subjt:  DSKEAIYGALDAWVAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMI

Query:  AIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKE----RVLVKYKYL-FDDEQGSMKKY
        A+Y  + + + ++++F D+E     P E S  +RVA A   L   E ++    R L +YKY+ F+ E+  +K+Y
Subjt:  AIYYRNKMLENLVKLFKDLEAFGRKPPEKSIVQRVADACEMLGLLEEKE----RVLVKYKYL-FDDEQGSMKKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCATCCGAAGGTTTCATCGAGCCGCGGCATGGGCGACGCCTCTGTTGCGACATCCAAATGTAGGGCAAACCATGGAGCTTGGAGTCAGCAAGCTGCAAGTTGGGAG
CTCTTGTTACTGCACAATGATACAAGATCAAATGTGTAAACAGCTTGCTGATAAAAGTAGAAAACATAAGGATGTTAACAATAGTAAAGCTTTGGGCCACATTTCAGAGC
AAAATACTGGAGACGTTAGAAAGCACCAAATTGGGCAAAATGTTTCACGGAAAGAAAAATTAACTTTCTTAGATAGTAAGGAGGCTATTTATGGTGCTCTTGATGCCTGG
GTTGCATGGGAGCAAGATTTTCCAATAGCATCCCTTAAGCATGCATTGGCTGCCCTTGAGAAGGAACAACAGTGGCATAGAATTGTACAGGTAATCAAATGGATGCTAAG
CAAGGGCCAGGGGACCACAATGAATGTCTATGGGCAGTTAATACGGGCTTTAGATAAGGACCATCGAGCGGAAGAAGCACACAAATTTTGGGTCATGATGATTGGTTCGG
ATCTTCATTCAGTTCCTTGGCAATTGTGCAGAAGCATGATAGCGATTTACTACCGAAATAAAATGCTAGAAAACCTTGTAAAGCTTTTTAAGGATCTCGAAGCCTTTGGA
CGTAAACCCCCAGAAAAATCAATAGTTCAGAGGGTAGCAGATGCTTGTGAGATGCTAGGCTTGCTTGAAGAGAAAGAGAGGGTACTCGTGAAGTACAAATACCTTTTTGA
TGACGAGCAAGGGTCCATGAAGAAATATAAGAGGATTTCGTTTGAAAAATCAAAGAGAAAACGAAAACTAACAAAGGGCACTGAAGACAATAGCAACCTCATGAAGTCTC
AATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCATCCGAAGGTTTCATCGAGCCGCGGCATGGGCGACGCCTCTGTTGCGACATCCAAATGTAGGGCAAACCATGGAGCTTGGAGTCAGCAAGCTGCAAGTTGGGAG
CTCTTGTTACTGCACAATGATACAAGATCAAATGTGTAAACAGCTTGCTGATAAAAGTAGAAAACATAAGGATGTTAACAATAGTAAAGCTTTGGGCCACATTTCAGAGC
AAAATACTGGAGACGTTAGAAAGCACCAAATTGGGCAAAATGTTTCACGGAAAGAAAAATTAACTTTCTTAGATAGTAAGGAGGCTATTTATGGTGCTCTTGATGCCTGG
GTTGCATGGGAGCAAGATTTTCCAATAGCATCCCTTAAGCATGCATTGGCTGCCCTTGAGAAGGAACAACAGTGGCATAGAATTGTACAGGTAATCAAATGGATGCTAAG
CAAGGGCCAGGGGACCACAATGAATGTCTATGGGCAGTTAATACGGGCTTTAGATAAGGACCATCGAGCGGAAGAAGCACACAAATTTTGGGTCATGATGATTGGTTCGG
ATCTTCATTCAGTTCCTTGGCAATTGTGCAGAAGCATGATAGCGATTTACTACCGAAATAAAATGCTAGAAAACCTTGTAAAGCTTTTTAAGGATCTCGAAGCCTTTGGA
CGTAAACCCCCAGAAAAATCAATAGTTCAGAGGGTAGCAGATGCTTGTGAGATGCTAGGCTTGCTTGAAGAGAAAGAGAGGGTACTCGTGAAGTACAAATACCTTTTTGA
TGACGAGCAAGGGTCCATGAAGAAATATAAGAGGATTTCGTTTGAAAAATCAAAGAGAAAACGAAAACTAACAAAGGGCACTGAAGACAATAGCAACCTCATGAAGTCTC
AATGA
Protein sequenceShow/hide protein sequence
MLIRRFHRAAAWATPLLRHPNVGQTMELGVSKLQVGSSCYCTMIQDQMCKQLADKSRKHKDVNNSKALGHISEQNTGDVRKHQIGQNVSRKEKLTFLDSKEAIYGALDAW
VAWEQDFPIASLKHALAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDKDHRAEEAHKFWVMMIGSDLHSVPWQLCRSMIAIYYRNKMLENLVKLFKDLEAFG
RKPPEKSIVQRVADACEMLGLLEEKERVLVKYKYLFDDEQGSMKKYKRISFEKSKRKRKLTKGTEDNSNLMKSQ