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PI0009475 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009475
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr10:419107..420613
RNA-Seq ExpressionPI0009475
SyntenyPI0009475
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.0e-2667.9Show/hide
Query:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ
        M +LL S   G  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPHGNTYN+GWRDNPNLRWGN+NQ+ TQA S+++NQ
Subjt:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ

KAA0051064.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.5e-2566.67Show/hide
Query:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ
        M SLL S   G  +KV KCGVCGL+GHPNDKCP ++E+ N+ R+YDPHGNTYN+GWRDNPNLRWGN+NQ+ TQA  +++NQ
Subjt:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ

KAA0062012.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.9e-2565.43Show/hide
Query:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ
        M +LL S   G  +KV KCGVCGL+GHPNDKCP+++E+ N++R+YDPHGNTYN+ WRDNPNLRWGN+NQ+ TQA S+++NQ
Subjt:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ

TYK19600.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.5e-2565.43Show/hide
Query:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ
        M +LL S   G  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPHGNTYN+GWRDNPNLRWGN+NQ+  QA  +++NQ
Subjt:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ

XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]2.5e-2565.43Show/hide
Query:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ
        M  LL S   G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNPNLRWGN+NQ+ TQA  +++NQ
Subjt:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ

TrEMBL top hitse value%identityAlignment
A0A5A7U6X0 Retrotransposon gag protein7.0e-2666.67Show/hide
Query:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ
        M SLL S   G  +KV KCGVCGL+GHPNDKCP ++E+ N+ R+YDPHGNTYN+GWRDNPNLRWGN+NQ+ TQA  +++NQ
Subjt:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ

A0A5A7V1C6 Retrotransposon gag protein9.2e-2665.43Show/hide
Query:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ
        M +LL S   G  +KV KCGVCGL+GHPNDKCP+++E+ N++R+YDPHGNTYN+ WRDNPNLRWGN+NQ+ TQA S+++NQ
Subjt:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ

A0A5D3CRR8 Retrotransposon gag protein4.9e-2767.9Show/hide
Query:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ
        M +LL S   G  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPHGNTYN+GWRDNPNLRWGN+NQ+ TQA S+++NQ
Subjt:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ

A0A5D3D815 Retrotransposon gag protein1.2e-2565.43Show/hide
Query:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ
        M +LL S   G  +KV KCGVCGL+GHPNDKCP+++E+ N++RKYDPHGNTYN+GWRDNPNLRWGN+NQ+  QA  +++NQ
Subjt:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ

A0A5D3DCG3 Retrotransposon gag protein1.2e-2565.43Show/hide
Query:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ
        M  LL S   G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNPNLRWGN+NQ+ TQA  +++NQ
Subjt:  MASLLRS--DGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGTTGCTGAGGAGCGACGGCGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGCGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTACAATACCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAATAATAATCAACAACCCACACAAGCAACTT
CTTCTGCAAATAATCAAGAAGTGGTAAAATTCTGCAAACCCCTCCATGTGAAGAAAAGGTACCTTCTAGCCCTAGCCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGTTGCTGAGGAGCGACGGCGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGCGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTACAATACCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAATAATAATCAACAACCCACACAAGCAACTT
CTTCTGCAAATAATCAAGAAGTGGTAAAATTCTGCAAACCCCTCCATGTGAAGAAAAGGTACCTTCTAGCCCTAGCCTTCTAG
Protein sequenceShow/hide protein sequence
MASLLRSDGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNTGWRDNPNLRWGNNNQQPTQATSSANNQEVVKFCKPLHVKKRYLLALAF