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PI0009500 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009500
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:10290586..10291821
RNA-Seq ExpressionPI0009500
SyntenyPI0009500
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.3e-5668.82Show/hide
Query:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q
        R NN RLR+VADDPQQVLNICN+NE+YMENIHYMYDVPIVPAP QRR   VQEP + +EVD H +EVPP+TQTQ++  YV P+MMMP FGT+YY S   Q
Subjt:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q

Query:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN
         S FG  YYNS+ G SS++FG +YYDLG+D SSSYM+ HGRGRG+HNEYLYYEV   VPEQ +  QQ EN
Subjt:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.6e-5669.19Show/hide
Query:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPV--TQTQNKVGYVIPMMMMPLFGTSYYPS--
        R NN RLR+VADDPQQVLNICN+NE+YMENIHYMYDVPIVPAP QRR   VQEP + +EVD H EEVPP+  TQTQ++  YV P+MMMP FGT+YY S  
Subjt:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPV--TQTQNKVGYVIPMMMMPLFGTSYYPS--

Query:  -QLSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN
         Q S FG  YYNSE G SS++FG +YYDLG+D SSSYM+ HGRGRGEHNEYLYYEV   VP+Q + +QQ EN
Subjt:  -QLSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN

KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.6e-5669.41Show/hide
Query:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q
        R NN RL +VADDPQQVLNICN NE+YMENIHYMYDVPIVPAP QRR   VQEP + +EVD H EEVPP+TQT+++  YV P+MMMP FGT+YY S   Q
Subjt:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q

Query:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN
         S FG  YYNSE G SS++FG +YYDLG+D SSSYM+ HGRGRGEHNEYLYYEV   VPEQ +  QQ EN
Subjt:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.3e-5770.59Show/hide
Query:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q
        R NN RLR+VADDPQQVLNICN+NE+YMENIHYMYDVPIVPAP QRR   VQEP + +EVD H EEVPP+TQTQ++  YV P+MMMP FGT+YY S   Q
Subjt:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q

Query:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN
         S FG  YYNSE G SS++FG +YYDLG+D SSSYM+ HGRGRGEHNEYLYYEV   VPEQ    QQ EN
Subjt:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.3e-5668.82Show/hide
Query:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q
        R NN RLR+VADDPQQVLNICN+NE+YMENIHYMYDVPIVPAP QRR   VQEP + +EVD H +EVPP+TQTQ++  YV P+MMMP FGT+YY S   Q
Subjt:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q

Query:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN
         S FG  YYNS+ G SS++FG +YYDLG+D SSSYM+ HGRGRG+HNEYLYYEV   VPEQ +  QQ EN
Subjt:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN

TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein1.6e-5668.82Show/hide
Query:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q
        R NN RLR+VADDPQQVLNICN+NE+YMENIHYMYDVPIVPAP QRR   VQEP + +EVD H +EVPP+TQTQ++  YV P+MMMP FGT+YY S   Q
Subjt:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q

Query:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN
         S FG  YYNS+ G SS++FG +YYDLG+D SSSYM+ HGRGRG+HNEYLYYEV   VPEQ +  QQ EN
Subjt:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN

A0A5A7U5S8 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.7e-5669.19Show/hide
Query:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPV--TQTQNKVGYVIPMMMMPLFGTSYYPS--
        R NN RLR+VADDPQQVLNICN+NE+YMENIHYMYDVPIVPAP QRR   VQEP + +EVD H EEVPP+  TQTQ++  YV P+MMMP FGT+YY S  
Subjt:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPV--TQTQNKVGYVIPMMMMPLFGTSYYPS--

Query:  -QLSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN
         Q S FG  YYNSE G SS++FG +YYDLG+D SSSYM+ HGRGRGEHNEYLYYEV   VP+Q + +QQ EN
Subjt:  -QLSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN

A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein2.7e-5669.41Show/hide
Query:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q
        R NN RL +VADDPQQVLNICN NE+YMENIHYMYDVPIVPAP QRR   VQEP + +EVD H EEVPP+TQT+++  YV P+MMMP FGT+YY S   Q
Subjt:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q

Query:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN
         S FG  YYNSE G SS++FG +YYDLG+D SSSYM+ HGRGRGEHNEYLYYEV   VPEQ +  QQ EN
Subjt:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-5770.59Show/hide
Query:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q
        R NN RLR+VADDPQQVLNICN+NE+YMENIHYMYDVPIVPAP QRR   VQEP + +EVD H EEVPP+TQTQ++  YV P+MMMP FGT+YY S   Q
Subjt:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q

Query:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN
         S FG  YYNSE G SS++FG +YYDLG+D SSSYM+ HGRGRGEHNEYLYYEV   VPEQ    QQ EN
Subjt:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.6e-5668.82Show/hide
Query:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q
        R NN RLR+VADDPQQVLNICN+NE+YMENIHYMYDVPIVPAP QRR   VQEP + +EVD H +EVPP+TQTQ++  YV P+MMMP FGT+YY S   Q
Subjt:  RLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEP-KFDEVDHHVEEVPPVTQTQNKVGYVIPMMMMPLFGTSYYPS---Q

Query:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN
         S FG  YYNS+ G SS++FG +YYDLG+D SSSYM+ HGRGRG+HNEYLYYEV   VPEQ +  QQ EN
Subjt:  LSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTCAGCTTCAAAATGTCAACGAACATCAATTAGCTGGAAAGGCCTATGGTTCACGATTATTTGGGAGCTATACAAAACTGTCATGGACAGTTTGCCCAATTTC
TGTACCAAGGAGATTGAACAATAGCAGACTTCGTGATGTGGCAGATGATCCACAACAGGTTCTTAATATATGCAACGAAAACGAGCGGTACATGGAGAATATACATTATA
TGTATGATGTACCCATTGTACCAGCACCAGCCCAAAGAAGACATGCTCGAGTGCAAGAGCCTAAGTTTGACGAGGTTGACCATCACGTGGAAGAAGTGCCTCCTGTGACA
CAAACACAAAATAAAGTTGGTTATGTTATTCCAATGATGATGATGCCACTCTTTGGTACGAGCTATTATCCTAGTCAATTGTCATACTTTGGATCAAAATATTACAATTC
AGAGGTCGGTTCATCATCGTCAAACTTTGGAACGGAATATTACGATTTAGGGACCGACCAATCATCTTCATACATGTATCGACATGGACGCGGTCGTGGAGAGCATAATG
AATATTTATACTATGAAGTGCTTCCAGTGGTACCTGAACAAGTAGAGAACAAACAACAACCAGAGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTCAGCTTCAAAATGTCAACGAACATCAATTAGCTGGAAAGGCCTATGGTTCACGATTATTTGGGAGCTATACAAAACTGTCATGGACAGTTTGCCCAATTTC
TGTACCAAGGAGATTGAACAATAGCAGACTTCGTGATGTGGCAGATGATCCACAACAGGTTCTTAATATATGCAACGAAAACGAGCGGTACATGGAGAATATACATTATA
TGTATGATGTACCCATTGTACCAGCACCAGCCCAAAGAAGACATGCTCGAGTGCAAGAGCCTAAGTTTGACGAGGTTGACCATCACGTGGAAGAAGTGCCTCCTGTGACA
CAAACACAAAATAAAGTTGGTTATGTTATTCCAATGATGATGATGCCACTCTTTGGTACGAGCTATTATCCTAGTCAATTGTCATACTTTGGATCAAAATATTACAATTC
AGAGGTCGGTTCATCATCGTCAAACTTTGGAACGGAATATTACGATTTAGGGACCGACCAATCATCTTCATACATGTATCGACATGGACGCGGTCGTGGAGAGCATAATG
AATATTTATACTATGAAGTGCTTCCAGTGGTACCTGAACAAGTAGAGAACAAACAACAACCAGAGAATTAG
Protein sequenceShow/hide protein sequence
MAPQLQNVNEHQLAGKAYGSRLFGSYTKLSWTVCPISVPRRLNNSRLRDVADDPQQVLNICNENERYMENIHYMYDVPIVPAPAQRRHARVQEPKFDEVDHHVEEVPPVT
QTQNKVGYVIPMMMMPLFGTSYYPSQLSYFGSKYYNSEVGSSSSNFGTEYYDLGTDQSSSYMYRHGRGRGEHNEYLYYEVLPVVPEQVENKQQPEN