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PI0009526 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009526
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:9724184..9724415
RNA-Seq ExpressionPI0009526
SyntenyPI0009526
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058838.1 retrotransposon protein [Cucumis melo var. makuwa]5.3e-1669.12Show/hide
Query:  MNEKVISLRLHECVSVGPPTIVRG----------SENLSLGEDMDGELRYGFGPRLTHGRWLYVHIGA
        MN+KVI LRL ECVSV P  +V G          SENLSLGEDMDG LRYGFGP LTHG+WLYVHIGA
Subjt:  MNEKVISLRLHECVSVGPPTIVRG----------SENLSLGEDMDGELRYGFGPRLTHGRWLYVHIGA

TYK25868.1 hypothetical protein E5676_scaffold436G00840 [Cucumis melo var. makuwa]4.0e-0883.33Show/hide
Query:  RGSENLSLGEDMDGELRYGFGPRLTHGRWLYVHIGA
        R SENLSLGEDMDG LRYG GP L HG WLYVHIGA
Subjt:  RGSENLSLGEDMDGELRYGFGPRLTHGRWLYVHIGA

XP_031740114.1 uncharacterized protein LOC105435219 [Cucumis sativus]2.2e-0682.35Show/hide
Query:  SENLSLGEDMDGELRYGFGPRLTHGRWLYVHIGA
        SENLSL EDMDG LRYGF P LTH  WLYVHIGA
Subjt:  SENLSLGEDMDGELRYGFGPRLTHGRWLYVHIGA

TrEMBL top hitse value%identityAlignment
A0A5A7UUF7 Retrotransposon protein2.6e-1669.12Show/hide
Query:  MNEKVISLRLHECVSVGPPTIVRG----------SENLSLGEDMDGELRYGFGPRLTHGRWLYVHIGA
        MN+KVI LRL ECVSV P  +V G          SENLSLGEDMDG LRYGFGP LTHG+WLYVHIGA
Subjt:  MNEKVISLRLHECVSVGPPTIVRG----------SENLSLGEDMDGELRYGFGPRLTHGRWLYVHIGA

A0A5D3DQP8 Uncharacterized protein2.0e-0883.33Show/hide
Query:  RGSENLSLGEDMDGELRYGFGPRLTHGRWLYVHIGA
        R SENLSLGEDMDG LRYG GP L HG WLYVHIGA
Subjt:  RGSENLSLGEDMDGELRYGFGPRLTHGRWLYVHIGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGAGAAGGTGATTTCCCTAAGGCTACATGAATGTGTTTCCGTAGGGCCACCTACAATTGTCAGGGGATCTGAGAACCTGAGCCTAGGTGAGGATATGGATGGAGA
ATTGCGGTATGGCTTCGGGCCTAGGTTAACACATGGTAGGTGGCTCTATGTGCACATAGGAGCGTGGATATGGAGGTTAATATGGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACGAGAAGGTGATTTCCCTAAGGCTACATGAATGTGTTTCCGTAGGGCCACCTACAATTGTCAGGGGATCTGAGAACCTGAGCCTAGGTGAGGATATGGATGGAGA
ATTGCGGTATGGCTTCGGGCCTAGGTTAACACATGGTAGGTGGCTCTATGTGCACATAGGAGCGTGGATATGGAGGTTAATATGGTGGTAG
Protein sequenceShow/hide protein sequence
MNEKVISLRLHECVSVGPPTIVRGSENLSLGEDMDGELRYGFGPRLTHGRWLYVHIGAWIWRLIWW