; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009542 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009542
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description50S ribosomal protein L24
Genome locationchr05:19261209..19270756
RNA-Seq ExpressionPI0009542
SyntenyPI0009542
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR003256 - Ribosomal protein L24
IPR005824 - KOW
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PPS07744.1 hypothetical protein GOBAR_AA12904 [Gossypium barbadense]9.5e-8090.57Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVM+ RGKDKGETG++KRVIRSQNR+IVEGKNLVKKHIKQGQGHEGGIFTVEAPLH SNVQVLDPVTGKPCKVG++YLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL
        +KVRVSRG+ ASGSIIPRPEILKIRT+PRPTVAGPKDTPMDLVL+KTYDPKTG GMP+L
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL

XP_008449336.1 PREDICTED: 50S ribosomal protein L24 [Cucumis melo]1.2e-8295.6Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMI RGKDKGETGV+KRVIR+QNR+IVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DPVTGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL
        SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMD+VLEKTYDPKTGKGMPEL
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL

XP_011649176.1 uncharacterized protein LOC101215964 [Cucumis sativus]2.3e-8193.08Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG
        MGWKAA+KLIRHWKILRGDNVMI RGKDKGETGV+KRVIR+QNR+IVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DPVTGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL
        SKVRV+RGLEASGS+IPRPEILKIR+SPRPTVAGPKDTPMD+VLEKTYDPKTGKGMPEL
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL

XP_022146016.1 uncharacterized protein LOC111015327 [Momordica charantia]5.6e-8092.45Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMI RGKDKGETG++KRVIRSQNR+IVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DP TGKPCKVGIRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL
        SKVRVSRG+ ASGSIIPRPEILKIRT+PRPTVAGPKDTPMD+VLEKTYD KTGKGMP+L
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL

XP_038889029.1 50S ribosomal protein L24 [Benincasa hispida]7.3e-8093.08Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMI RGKDKGETGV+KRVIR+QNR+IVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DPVTGKPCKVGIRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL
        SKVRVSRG+ ASGSIIPR EILKIRT+PRPTVAGPKDTPMD+VLEKTYD KTGKGMPEL
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL

TrEMBL top hitse value%identityAlignment
A0A0A0LIP5 KOW domain-containing protein1.1e-8193.08Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG
        MGWKAA+KLIRHWKILRGDNVMI RGKDKGETGV+KRVIR+QNR+IVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DPVTGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL
        SKVRV+RGLEASGS+IPRPEILKIR+SPRPTVAGPKDTPMD+VLEKTYDPKTGKGMPEL
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL

A0A0B0PKJ5 50S ribosomal L244.6e-8090.57Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVM+ RGKDKGETG++KRVIRSQNR+IVEGKNLVKKHIKQGQGHEGGIFTVEAPLH SNVQVLDPVTGKPCKVG++YLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL
        +KVRVSRG+ ASGSIIPRPEILKIRT+PRPTVAGPKDTPMDLVL+KTYDPKTG GMP+L
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL

A0A1S3BL65 50S ribosomal protein L245.8e-8395.6Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMI RGKDKGETGV+KRVIR+QNR+IVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DPVTGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL
        SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMD+VLEKTYDPKTGKGMPEL
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL

A0A6J1CYB5 uncharacterized protein LOC1110153272.7e-8092.45Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMI RGKDKGETG++KRVIRSQNR+IVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DP TGKPCKVGIRYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL
        SKVRVSRG+ ASGSIIPRPEILKIRT+PRPTVAGPKDTPMD+VLEKTYD KTGKGMP+L
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL

B5AJV4 Ribosomal protein L245.8e-8395.6Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMI RGKDKGETGV+KRVIR+QNR+IVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQV+DPVTGKPCKVG RYLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL
        SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMD+VLEKTYDPKTGKGMPEL
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL

SwissProt top hitse value%identityAlignment
C3PP96 50S ribosomal protein L245.5e-2248.54Show/hide
Query:  KILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVRVSRGLEASG
        K+ +GD V++  GK KG+ G + +V    +++IV G N+VKKH K  Q  EGGI T E P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVRVSRGLEASG

Query:  SII
         II
Subjt:  SII

Q4UMR8 50S ribosomal protein L243.2e-2249.51Show/hide
Query:  KILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVRVSRGLEASG
        K+ +GD V++  GK KG+ G + +V    +++IV G NLVKKH K  Q  EGGI T E P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVRVSRGLEASG

Query:  SII
         II
Subjt:  SII

Q68W89 50S ribosomal protein L242.5e-2250.49Show/hide
Query:  KILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVRVSRGLEASG
        K+ +GD V++  GK KG+ G V +V   +N +IV G NLVKKH K  +  EGGI T E+P+H+SNV  +DP TG P KV  ++LEDGSKVR+++    SG
Subjt:  KILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVRVSRGLEASG

Query:  SII
         II
Subjt:  SII

Q92GX7 50S ribosomal protein L245.5e-2248.54Show/hide
Query:  KILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVRVSRGLEASG
        K+ +GD V++  GK KG+ G + +V    +++IV G N+VKKH K  Q  EGGI T E P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVRVSRGLEASG

Query:  SII
         II
Subjt:  SII

Q9ZCR6 50S ribosomal protein L242.5e-2250.49Show/hide
Query:  KILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVRVSRGLEASG
        K+ +GD V+I  GK KG+ G V +V   +N ++V G NLVKKH K  +  EGGI T E+P+H+SN+  +DP TG P KV  ++LEDGSKVRV++    SG
Subjt:  KILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVRVSRGLEASG

Query:  SII
         II
Subjt:  SII

Arabidopsis top hitse value%identityAlignment
AT5G23535.1 KOW domain-containing protein2.3e-7683.02Show/hide
Query:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG
        MGWKAAEKLIRHWKILRGDNVMI RGKDKGETG +KRVIRSQNR+IVEGKNL+KKHIK G  HEGGIFTVEAPLH SNVQV+DPVTG+PCKVG++YLEDG
Subjt:  MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDG

Query:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL
        +KVRV+RG   SGSIIPRPEILKIR +PRPT AGPKDTPM+ V E+TYD KTGKGMP+L
Subjt:  SKVRVSRGLEASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL

AT5G54600.1 Translation protein SH3-like family protein9.1e-1238.64Show/hide
Query:  GDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIK-QGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVR
        GD V +  G+DKG+ G V ++    + I+++  NL  KH+K + +G  G I  +EAP+H SNV +         +VG + LEDG KVR
Subjt:  GDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIK-QGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVR

AT5G54600.2 Translation protein SH3-like family protein1.3e-0532.18Show/hide
Query:  GDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVR
        GD V +  G+DKG+ G V ++    + I                   G I  +EAP+H SNV +         +VG + LEDG KVR
Subjt:  GDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGGAAGGCTGCTGAAAAGCTTATTAGGCACTGGAAAATTCTTAGAGGAGATAATGTGATGATCACTAGAGGCAAGGATAAAGGAGAAACTGGTGTAGTTAAGCG
TGTTATTCGCAGTCAAAATCGTATTATTGTTGAGGGAAAAAACCTGGTGAAAAAACACATTAAACAAGGACAAGGTCATGAAGGTGGAATCTTTACAGTTGAAGCTCCCC
TCCATGTATCAAATGTCCAAGTTCTTGATCCAGTAACAGGGAAGCCTTGTAAGGTTGGTATTAGATATCTTGAAGATGGTTCTAAAGTACGAGTTTCAAGAGGATTGGAA
GCCTCTGGATCTATAATTCCTCGTCCGGAGATCTTAAAGATAAGGACTTCTCCGAGACCTACAGTTGCTGGTCCCAAGGATACTCCAATGGATCTGGTTCTGGAGAAAAC
TTATGATCCTAAAACAGGGAAGGGCATGCCTGAACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGGAAGGCTGCTGAAAAGCTTATTAGGCACTGGAAAATTCTTAGAGGAGATAATGTGATGATCACTAGAGGCAAGGATAAAGGAGAAACTGGTGTAGTTAAGCG
TGTTATTCGCAGTCAAAATCGTATTATTGTTGAGGGAAAAAACCTGGTGAAAAAACACATTAAACAAGGACAAGGTCATGAAGGTGGAATCTTTACAGTTGAAGCTCCCC
TCCATGTATCAAATGTCCAAGTTCTTGATCCAGTAACAGGGAAGCCTTGTAAGGTTGGTATTAGATATCTTGAAGATGGTTCTAAAGTACGAGTTTCAAGAGGATTGGAA
GCCTCTGGATCTATAATTCCTCGTCCGGAGATCTTAAAGATAAGGACTTCTCCGAGACCTACAGTTGCTGGTCCCAAGGATACTCCAATGGATCTGGTTCTGGAGAAAAC
TTATGATCCTAAAACAGGGAAGGGCATGCCTGAACTTTAA
Protein sequenceShow/hide protein sequence
MGWKAAEKLIRHWKILRGDNVMITRGKDKGETGVVKRVIRSQNRIIVEGKNLVKKHIKQGQGHEGGIFTVEAPLHVSNVQVLDPVTGKPCKVGIRYLEDGSKVRVSRGLE
ASGSIIPRPEILKIRTSPRPTVAGPKDTPMDLVLEKTYDPKTGKGMPEL