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PI0009660 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009660
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr05:2947587..2948060
RNA-Seq ExpressionPI0009660
SyntenyPI0009660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.8e-3650.65Show/hide
Query:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK
        MRRLKQL + IK W ++K   +E+ +++ +KEI+ IDKLEA    T+    +RTA+KA L+ I   EAQ+W+QKCKR+W++EGDEN++FFHK+C+ RQKK
Subjt:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK

Query:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPISMLS
         +ISKI N  G    N++DI   FI HF +IYTD       IEN+DW PIS ++
Subjt:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPISMLS
KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.6e-3450.99Show/hide
Query:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK
        MRRLKQL + IK W K K    E  +++W+KEI  IDKLEA    T+    +R A+KA L+ I   EAQ+W+QKCKR+W++EGDEN++FFHK+C+ RQKK
Subjt:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK

Query:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
         +ISK+ N  G    N++DI   FI HF  IYTD       I+N+DW PIS
Subjt:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.0e-3450.33Show/hide
Query:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK
        MRRLKQL + IK W K K    E  +++W+KEI+ IDKLEA    T+    +R A+KA L+ I   +AQ+W+QKCKR+W++EGDEN++FFHK+C+ RQKK
Subjt:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK

Query:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
         +ISK+ N  G    N++DI   FI HF  IYTD       I+N DW PIS
Subjt:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
TYJ99326.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.6e-3449.67Show/hide
Query:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK
        M RLKQL + IK W + K    E+ +++W+KEI+ I+KLEA    T+    +R A+KA L+ I   EAQ+W+QKCKR+W++EGDEN++FFHK+C+ RQKK
Subjt:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK

Query:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
         +ISKI N  G    N++DI   FI HF  IYTD       I+N+DW PIS
Subjt:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
TYK29577.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.4e-3550.33Show/hide
Query:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK
        M RLKQL + IK W + K   +E+ +++W+KEI+ IDKLEA    T+    +R A+KA L+ I   EAQ+W+QKCKR+W++EGDEN++FFHK+C+ RQKK
Subjt:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK

Query:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
         +ISKI N  G    N++DI   FI HF  IYTD       I+N+DW PIS
Subjt:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein1.8e-3650.65Show/hide
Query:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK
        MRRLKQL + IK W ++K   +E+ +++ +KEI+ IDKLEA    T+    +RTA+KA L+ I   EAQ+W+QKCKR+W++EGDEN++FFHK+C+ RQKK
Subjt:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK

Query:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPISMLS
         +ISKI N  G    N++DI   FI HF +IYTD       IEN+DW PIS ++
Subjt:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPISMLS
A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein7.6e-3550.99Show/hide
Query:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK
        MRRLKQL + IK W K K    E  +++W+KEI  IDKLEA    T+    +R A+KA L+ I   EAQ+W+QKCKR+W++EGDEN++FFHK+C+ RQKK
Subjt:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK

Query:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
         +ISK+ N  G    N++DI   FI HF  IYTD       I+N+DW PIS
Subjt:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein2.9e-3450.33Show/hide
Query:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK
        MRRLKQL + IK W K K    E  +++W+KEI+ IDKLEA    T+    +R A+KA L+ I   +AQ+W+QKCKR+W++EGDEN++FFHK+C+ RQKK
Subjt:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK

Query:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
         +ISK+ N  G    N++DI   FI HF  IYTD       I+N DW PIS
Subjt:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
A0A5D3BJP3 LINE-1 retrotransposable element ORF2 protein2.2e-3449.67Show/hide
Query:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK
        M RLKQL + IK W + K    E+ +++W+KEI+ I+KLEA    T+    +R A+KA L+ I   EAQ+W+QKCKR+W++EGDEN++FFHK+C+ RQKK
Subjt:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK

Query:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
         +ISKI N  G    N++DI   FI HF  IYTD       I+N+DW PIS
Subjt:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
A0A5D3E0F6 LINE-1 retrotransposable element ORF2 protein6.9e-3650.33Show/hide
Query:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK
        M RLKQL + IK W + K   +E+ +++W+KEI+ IDKLEA    T+    +R A+KA L+ I   EAQ+W+QKCKR+W++EGDEN++FFHK+C+ RQKK
Subjt:  MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKK

Query:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
         +ISKI N  G    N++DI   FI HF  IYTD       I+N+DW PIS
Subjt:  NVISKISNAEGTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPIS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGATTGAAACAATTGACTATTCCAATCAAACAATGGGCTAAAAACAAAGCTCTTGTTTCTGAGTCTGATAGAAGAAGCTGGTTGAAAGAAATTGAGGATATTGA
CAAACTTGAAGCCAACATTGACATCACTGATGCTCAAAGTCACAGAAGGACAGCTATTAAAGCTTATCTAAACCATATTGCTTTTAAGGAAGCTCAATTGTGGTCCCAAA
AGTGTAAGCGTCTCTGGATAAATGAGGGGGATGAAAACACTACCTTCTTCCACAAAGTCTGTTCAGTCAGACAGAAGAAAAATGTTATTTCTAAGATTTCAAATGCTGAG
GGTACTCTCTTTACAAATGAGAATGATATTGACTTGGTTTTCATATGTCATTTTCATAATATCTATACAGATCCCTTAGAAGACATATTCATTATAGAGAATATTGATTG
GGCCCCTATATCAATGCTGTCAGTGCAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGATTGAAACAATTGACTATTCCAATCAAACAATGGGCTAAAAACAAAGCTCTTGTTTCTGAGTCTGATAGAAGAAGCTGGTTGAAAGAAATTGAGGATATTGA
CAAACTTGAAGCCAACATTGACATCACTGATGCTCAAAGTCACAGAAGGACAGCTATTAAAGCTTATCTAAACCATATTGCTTTTAAGGAAGCTCAATTGTGGTCCCAAA
AGTGTAAGCGTCTCTGGATAAATGAGGGGGATGAAAACACTACCTTCTTCCACAAAGTCTGTTCAGTCAGACAGAAGAAAAATGTTATTTCTAAGATTTCAAATGCTGAG
GGTACTCTCTTTACAAATGAGAATGATATTGACTTGGTTTTCATATGTCATTTTCATAATATCTATACAGATCCCTTAGAAGACATATTCATTATAGAGAATATTGATTG
GGCCCCTATATCAATGCTGTCAGTGCAATTTTGA
Protein sequenceShow/hide protein sequence
MRRLKQLTIPIKQWAKNKALVSESDRRSWLKEIEDIDKLEANIDITDAQSHRRTAIKAYLNHIAFKEAQLWSQKCKRLWINEGDENTTFFHKVCSVRQKKNVISKISNAE
GTLFTNENDIDLVFICHFHNIYTDPLEDIFIIENIDWAPISMLSVQF