; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009677 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009677
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCR4-NOT transcription complex subunit like
Genome locationchr01:26480236..26482662
RNA-Seq ExpressionPI0009677
SyntenyPI0009677
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575660.1 hypothetical protein SDJN03_26299, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3678.12Show/hide
Query:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGI
        MASIFAAPPS+LNLTSR SLI  AVLPSSIA IQ+HSNA P  SFRYR N  GLELRQR  SI AS S+D N IK+EN SSKASS DAQGPPFLTILAGI
Subjt:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGI

Query:  FVFSLILWIFSSAVTSLFGLVVKLISAK
        FVFSL+LW+ SSA TSL GLVVKLIS K
Subjt:  FVFSLILWIFSSAVTSLFGLVVKLISAK

XP_011659472.1 uncharacterized protein LOC101220885 [Cucumis sativus]1.4e-4991.27Show/hide
Query:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQRSIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGIFV
        MAS+FAAPPSQLNLTSRRS I RA LPS IASIQFHSNASPF SFRYRKNIIGLELRQRSIAASKSTDGN IK+ENSSSKASSDDAQGPPFLTILAG FV
Subjt:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQRSIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGIFV

Query:  FSLILWIFSSAVTSLFGLVVKLISAK
         SLILWIFSSAVTSL GLVVKLISAK
Subjt:  FSLILWIFSSAVTSLFGLVVKLISAK

XP_022953425.1 uncharacterized protein LOC111455984 [Cucurbita moschata]4.6e-3778.12Show/hide
Query:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGI
        MASIF+APPS+LNLTSR SLI  AVLPSSIA IQ+HSNA P  SFRYR N  GLELRQR  SI AS S+DGN IK+EN SSKASS DAQGPPFLTILAGI
Subjt:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGI

Query:  FVFSLILWIFSSAVTSLFGLVVKLISAK
        FVFSL+LW+ SSA TSL GLVVKLIS K
Subjt:  FVFSLILWIFSSAVTSLFGLVVKLISAK

XP_022991945.1 uncharacterized protein LOC111488436 [Cucurbita maxima]5.7e-3576.98Show/hide
Query:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGI
        MASIFAAPPS+LNLTSR SLI  AVLPSSIA IQ+HSNA P  SFRYR N  GLEL  R  SI AS S+DGN I++EN SSKASS DAQGPPFLTILAGI
Subjt:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGI

Query:  FVFSLILWIFSSAVTSLFGLVVKLIS
        FVFSL+LW+ SSA TSL GLVVKLIS
Subjt:  FVFSLILWIFSSAVTSLFGLVVKLIS

XP_038899532.1 uncharacterized protein LOC120086813 isoform X1 [Benincasa hispida]6.1e-3778.12Show/hide
Query:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGI
        MASIFAAP  +LNLTSR SLI RA LPSSI +IQFHSNASPF SFRYR N  GLELRQR  SI AS S+DGN IK+EN SSKAS+ DAQGPPFLTILAGI
Subjt:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGI

Query:  FVFSLILWIFSSAVTSLFGLVVKLISAK
        FVFSL+LWIFSS VTS   LVVKLIS K
Subjt:  FVFSLILWIFSSAVTSLFGLVVKLISAK

TrEMBL top hitse value%identityAlignment
A0A0A0K9W1 Uncharacterized protein6.7e-5091.27Show/hide
Query:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQRSIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGIFV
        MAS+FAAPPSQLNLTSRRS I RA LPS IASIQFHSNASPF SFRYRKNIIGLELRQRSIAASKSTDGN IK+ENSSSKASSDDAQGPPFLTILAG FV
Subjt:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQRSIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGIFV

Query:  FSLILWIFSSAVTSLFGLVVKLISAK
         SLILWIFSSAVTSL GLVVKLISAK
Subjt:  FSLILWIFSSAVTSLFGLVVKLISAK

A0A5A7UVF6 Uncharacterized protein2.4e-3190.91Show/hide
Query:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQRSIAASKSTDGNPIKDENSSSKASSDDAQG
        MASIF APPSQLNLTSRRSL  RAVLPSSIASIQF SNASPFLSF  RKNIIGLELRQRSIAASKSTDGN IK+ENSSSKASSDDAQG
Subjt:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQRSIAASKSTDGNPIKDENSSSKASSDDAQG

A0A6J1GPL5 uncharacterized protein LOC1114559842.2e-3778.12Show/hide
Query:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGI
        MASIF+APPS+LNLTSR SLI  AVLPSSIA IQ+HSNA P  SFRYR N  GLELRQR  SI AS S+DGN IK+EN SSKASS DAQGPPFLTILAGI
Subjt:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGI

Query:  FVFSLILWIFSSAVTSLFGLVVKLISAK
        FVFSL+LW+ SSA TSL GLVVKLIS K
Subjt:  FVFSLILWIFSSAVTSLFGLVVKLISAK

A0A6J1JUC2 uncharacterized protein LOC1114884362.7e-3576.98Show/hide
Query:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGI
        MASIFAAPPS+LNLTSR SLI  AVLPSSIA IQ+HSNA P  SFRYR N  GLEL  R  SI AS S+DGN I++EN SSKASS DAQGPPFLTILAGI
Subjt:  MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGI

Query:  FVFSLILWIFSSAVTSLFGLVVKLIS
        FVFSL+LW+ SSA TSL GLVVKLIS
Subjt:  FVFSLILWIFSSAVTSLFGLVVKLIS

A0A6J1KVQ7 uncharacterized protein LOC1114980253.6e-2765.12Show/hide
Query:  MASIFAAPPSQLNLTSRR-SLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAG
        MAS+FAAPPSQL L+S R SL  +A LP SI  ++FH N  P  SFRY KN  GL+LRQR  SI AS S+DGN  K+EN  SK +  DAQGPPFLTILAG
Subjt:  MASIFAAPPSQLNLTSRR-SLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQR--SIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAG

Query:  IFVFSLILWIFSSAVTSLFGLVVKLISAK
         FVFSL+LWI SS+VT+L  LVVKLIS K
Subjt:  IFVFSLILWIFSSAVTSLFGLVVKLISAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCTTCGCTGCGCCGCCGTCTCAACTGAATCTCACATCCCGCCGGAGTTTGATTCCCAGAGCCGTTCTTCCATCTTCCATCGCCAGCATTCAATTTCACTC
GAACGCCTCTCCATTTCTTTCTTTCAGGTACAGGAAGAACATCATTGGATTGGAATTAAGGCAAAGATCTATAGCAGCCTCAAAATCCACAGATGGGAATCCCATCAAGG
ATGAAAATAGTTCGAGTAAAGCAAGTAGTGATGATGCTCAAGGTCCTCCATTTCTTACCATTTTGGCTGGCATTTTTGTCTTTTCCCTTATACTATGGATATTCAGTTCT
GCTGTTACGTCACTTTTTGGTCTAGTCGTCAAGCTGATCTCAGCAAAATAG
mRNA sequenceShow/hide mRNA sequence
GTTTGCTAGATCCTGAGGTTTGTTTTTGGGGAATTGATGTTTTCAATTGGATTTCCTATGCTATAATAGAGGAGTTTGCTTGTTTTTTTATATAATATTTTCTTTAAAAA
AAATCCCATGTGTACTAAAAAAGAAAATATTGGTACGATAAGAAAATGACACGTGGATTACGAATGGAAGAAGCACCAACCACTCGCTCTTTCTCTCCGGAAGCTCCGAA
GTCTTTGTATTACGACTAATTCACTGACGGTGAAGAATGGCTTCCATCTTCGCTGCGCCGCCGTCTCAACTGAATCTCACATCCCGCCGGAGTTTGATTCCCAGAGCCGT
TCTTCCATCTTCCATCGCCAGCATTCAATTTCACTCGAACGCCTCTCCATTTCTTTCTTTCAGGTACAGGAAGAACATCATTGGATTGGAATTAAGGCAAAGATCTATAG
CAGCCTCAAAATCCACAGATGGGAATCCCATCAAGGATGAAAATAGTTCGAGTAAAGCAAGTAGTGATGATGCTCAAGGTCCTCCATTTCTTACCATTTTGGCTGGCATT
TTTGTCTTTTCCCTTATACTATGGATATTCAGTTCTGCTGTTACGTCACTTTTTGGTCTAGTCGTCAAGCTGATCTCAGCAAAATAGTGTCGCATAATTGGAATAATTTC
ATGTTCCTAAGCTTAAATCTGTATGGTTATATTTGTAGCAAAACTTGCTTCTTAGCCAGTTTTAGCTTTATTTCTAGTGAATAGATTTTATTTTCATCTTATTTATGCCC
TAGCTTCGGTCTTTGGGTGATTAAAGATGAAATCACTTTCAAAAGTACACTATTTAGTGTAGTAGTTTCGCTTTTCGTGTTTAGGGTCATTCATGTTTGGAGATTTTAAT
CATTCATTTTTTTTTTTGGAGTTTAATTGAATAAAATAAACACGTCTTTA
Protein sequenceShow/hide protein sequence
MASIFAAPPSQLNLTSRRSLIPRAVLPSSIASIQFHSNASPFLSFRYRKNIIGLELRQRSIAASKSTDGNPIKDENSSSKASSDDAQGPPFLTILAGIFVFSLILWIFSS
AVTSLFGLVVKLISAK