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PI0009678 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009678
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGlycerophosphocholine acyltransferase 1
Genome locationchr03:15447089..15448038
RNA-Seq ExpressionPI0009678
SyntenyPI0009678
Gene Ontology termsGO:0006656 - phosphatidylcholine biosynthetic process (biological process)
GO:0007076 - mitotic chromosome condensation (biological process)
GO:0051301 - cell division (biological process)
GO:0000793 - condensed chromosome (cellular component)
GO:0000796 - condensin complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003682 - chromatin binding (molecular function)
GO:0016746 - transferase activity, transferring acyl groups (molecular function)
InterPro domainsIPR021261 - Glycerophosphocholine acyltransferase 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034790.1 condensin complex subunit 2 [Cucumis melo var. makuwa]7.1e-1890.2Show/hide
Query:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD
        +CI+ M LNMRVKDEISPTLRNIV+LFDEDNIRPSDYCSSGPKAAEQVHMD
Subjt:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD

TYK09591.1 condensin complex subunit 2 [Cucumis melo var. makuwa]7.1e-1890.2Show/hide
Query:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD
        +CI+ M LNMRVKDEISPTLRNIV+LFDEDNIRPSDYCSSGPKAAEQVHMD
Subjt:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD

XP_004144017.1 uncharacterized membrane protein C776.05 isoform X1 [Cucumis sativus]2.7e-1794.83Show/hide
Query:  MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGF-RFCFILGA
        MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHE+FINKVTHLLGVLGF  FCFILGA
Subjt:  MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGF-RFCFILGA

XP_008455919.1 PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2 [Cucumis melo]7.1e-1890.2Show/hide
Query:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD
        +CI+ M LNMRVKDEISPTLRNIV+LFDEDNIRPSDYCSSGPKAAEQVHMD
Subjt:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD

XP_011649987.1 condensin complex subunit 2 [Cucumis sativus]3.2e-1892.16Show/hide
Query:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD
        +CIE M LNMRVKDEISPTLRNIV+LFDEDNIRPSDYCSSGPKAAEQVHMD
Subjt:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD

TrEMBL top hitse value%identityAlignment
A0A0A0LN33 Condensin complex subunit 21.5e-1892.16Show/hide
Query:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD
        +CIE M LNMRVKDEISPTLRNIV+LFDEDNIRPSDYCSSGPKAAEQVHMD
Subjt:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD

A0A1S3C398 Condensin complex subunit 23.4e-1890.2Show/hide
Query:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD
        +CI+ M LNMRVKDEISPTLRNIV+LFDEDNIRPSDYCSSGPKAAEQVHMD
Subjt:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD

A0A4D9C4S6 Glycerophosphocholine acyltransferase 13.4e-1884.85Show/hide
Query:  MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGF-RFCFILGANCIEGMAL
        +AQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHE FINKVTHLLGVLGF  FCFILGAN   G+ +
Subjt:  MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGF-RFCFILGANCIEGMAL

A0A5A7SUZ7 Condensin complex subunit 23.4e-1890.2Show/hide
Query:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD
        +CI+ M LNMRVKDEISPTLRNIV+LFDEDNIRPSDYCSSGPKAAEQVHMD
Subjt:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD

A0A5D3CCN8 Condensin complex subunit 23.4e-1890.2Show/hide
Query:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD
        +CI+ M LNMRVKDEISPTLRNIV+LFDEDNIRPSDYCSSGPKAAEQVHMD
Subjt:  NCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD

SwissProt top hitse value%identityAlignment
A0A078H868 Glycerophosphocholine acyltransferase 12.8e-1781.03Show/hide
Query:  MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGF-RFCFILGA
        + QT+++LSKQAVQT+EILSKQAVKIAKQAEEHE+FINKVTHL+GVLGF  FCF+LGA
Subjt:  MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGF-RFCFILGA

B9RK42 Glycerophosphocholine acyltransferase 14.3e-1887.93Show/hide
Query:  MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGF-RFCFILGA
        +AQTKE+LSKQA QTKEILSKQAVKIAKQAEEHE FINKVTHLLGVLGF  FCF+LGA
Subjt:  MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGF-RFCFILGA

Q564K3 Condensin complex subunit 22.6e-0757.78Show/hide
Query:  CIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAE
        C+E M LNMR KDEI P+LR I++ FDE+N RPSD  S G +  E
Subjt:  CIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAE

Q9FJB4 Glycerophosphocholine acyltransferase 11.3e-1782.76Show/hide
Query:  MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGF-RFCFILGA
        + QT+E+LSKQAVQT+EILSKQAVKIAKQAEEHE+FINKVTHL+GVLGF  FCF+LGA
Subjt:  MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGF-RFCFILGA

Arabidopsis top hitse value%identityAlignment
AT2G32590.1 LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Barren (InterPro:IPR008418); Has 467 Blast hits to 447 proteins in 202 species: Archae - 0; Bacteria - 4; Metazoa - 147; Fungi - 168; Plants - 39; Viruses - 1; Other Eukaryotes - 108 (source: NCBI BLink).1.9e-0857.78Show/hide
Query:  CIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAE
        C+E M LNMR KDEI P+LR I++ FDE+N RPSD  S G +  E
Subjt:  CIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAE

AT5G35460.1 unknown protein8.9e-1982.76Show/hide
Query:  MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGF-RFCFILGA
        + QT+E+LSKQAVQT+EILSKQAVKIAKQAEEHE+FINKVTHL+GVLGF  FCF+LGA
Subjt:  MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGF-RFCFILGA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAAACGAAAGAGATGTTATCAAAACAAGCAGTTCAAACGAAAGAGATTCTATCTAAACAGGCGGTAAAGATCGCTAAGCAGGCCGAAGAACACGAACAATTCAT
TAATAAGGTTACGCACCTGCTTGGAGTTCTTGGTTTCAGATTCTGCTTCATCTTAGGAGCGAATTGCATCGAGGGGATGGCATTGAATATGCGTGTGAAGGATGAAATAT
CTCCAACTCTGAGGAATATAGTCGATCTATTTGATGAAGATAACATACGACCATCAGATTATTGTAGTTCAGGTCCGAAAGCAGCCGAGCAAGTGCATATGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACAAACGAAAGAGATGTTATCAAAACAAGCAGTTCAAACGAAAGAGATTCTATCTAAACAGGCGGTAAAGATCGCTAAGCAGGCCGAAGAACACGAACAATTCAT
TAATAAGGTTACGCACCTGCTTGGAGTTCTTGGTTTCAGATTCTGCTTCATCTTAGGAGCGAATTGCATCGAGGGGATGGCATTGAATATGCGTGTGAAGGATGAAATAT
CTCCAACTCTGAGGAATATAGTCGATCTATTTGATGAAGATAACATACGACCATCAGATTATTGTAGTTCAGGTCCGAAAGCAGCCGAGCAAGTGCATATGGATTAA
Protein sequenceShow/hide protein sequence
MAQTKEMLSKQAVQTKEILSKQAVKIAKQAEEHEQFINKVTHLLGVLGFRFCFILGANCIEGMALNMRVKDEISPTLRNIVDLFDEDNIRPSDYCSSGPKAAEQVHMD