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PI0009685 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009685
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr09:14300627..14301304
RNA-Seq ExpressionPI0009685
SyntenyPI0009685
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.3e-5970.65Show/hide
Query:  RLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIP
        RLYIT+  A     RSNN RLRDVADD QQVLDICNNN+R+ME+IH MY +PIVPP ++  RV+VEE ELDEVYHNVEE+   TQ QNQTGYGSPM+M+P
Subjt:  RLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIP

Query:  VFGAG---------YYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSR
         FG G         YYDSGVGPSSSYMDV PST YMHGH H  D GEHNEYLY+EAPT+V D QEYQQ+PENQEEL Q RVQSR
Subjt:  VFGAG---------YYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSR

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.5e-6672.96Show/hide
Query:  RLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIP
        RLYITR  AAV   RSNN RLRDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE ELD+VYHNVEEVP  TQTQ+QTGYGSPM M+P
Subjt:  RLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIP

Query:  VF---------GAGYYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG
         F         G GYYD+GVGPSSSY+DV PST YM  HGH R  GEHNEYLY+EAP DV D QEYQQ+PENQE+  Q RVQSR RQP RNRRRPG
Subjt:  VF---------GAGYYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.0e-6273.08Show/hide
Query:  RSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIPVF---------GAG
        RSNN RLRDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE ELD+VYHNVEEVP  TQTQ+QTGYGSPM M+P F         G G
Subjt:  RSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIPVF---------GAG

Query:  YYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG
        YYD+GVGPSSSY+DV PST YM  HGH R  GEHNEYLY+EAP DV D QEYQQ+PENQE+  Q RVQSR RQP RNRR PG
Subjt:  YYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG

TYK22189.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.4e-5669.23Show/hide
Query:  RSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIPVFGAG
        RS+  V+ LRSNN RLRDVADDPQQVLDICNNNERYME+IH +YD+PIVPPP++  RVRVEE ELDEVYH V+EV  MTQTQ+QTGY             
Subjt:  RSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIPVFGAG

Query:  YYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG
            GVGPSSSYMDV PST YM  HGHER   EHNEYLY+EAP DV D QEYQQ+PENQE+  Q RVQSR RQP +NRRRPG
Subjt:  YYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.1e-6772.45Show/hide
Query:  RLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIP
        RLYITR  A V HLRSNN RLRDV +DPQQVLDICNNNERYME IH +YD+PIVPPPV+ ER RVEE ELDEVYHNVEEVP  TQTQ+QTGYGSPM M+P
Subjt:  RLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIP

Query:  VFGA---------GYYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG
         FGA         GYYD+ VGP SSYMDV PST YM+GHG  R  GEHNEYLY+EAPTDV D QEYQQ+P+NQE+  Q RVQSR RQP RNR+  G
Subjt:  VFGA---------GYYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-5970.65Show/hide
Query:  RLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIP
        RLYIT+  A     RSNN RLRDVADD QQVLDICNNN+R+ME+IH MY +PIVPP ++  RV+VEE ELDEVYHNVEE+   TQ QNQTGYGSPM+M+P
Subjt:  RLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIP

Query:  VFGAG---------YYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSR
         FG G         YYDSGVGPSSSYMDV PST YMHGH H  D GEHNEYLY+EAPT+V D QEYQQ+PENQEEL Q RVQSR
Subjt:  VFGAG---------YYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSR

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.3e-6772.96Show/hide
Query:  RLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIP
        RLYITR  AAV   RSNN RLRDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE ELD+VYHNVEEVP  TQTQ+QTGYGSPM M+P
Subjt:  RLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIP

Query:  VF---------GAGYYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG
         F         G GYYD+GVGPSSSY+DV PST YM  HGH R  GEHNEYLY+EAP DV D QEYQQ+PENQE+  Q RVQSR RQP RNRRRPG
Subjt:  VF---------GAGYYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X24.9e-6373.08Show/hide
Query:  RSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIPVF---------GAG
        RSNN RLRDVADD QQ LDICNNNERYME+IH MYD+PIVPPPV+   VRVEE ELD+VYHNVEEVP  TQTQ+QTGYGSPM M+P F         G G
Subjt:  RSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIPVF---------GAG

Query:  YYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG
        YYD+GVGPSSSY+DV PST YM  HGH R  GEHNEYLY+EAP DV D QEYQQ+PENQE+  Q RVQSR RQP RNRR PG
Subjt:  YYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG

A0A5D3DFZ9 GATA zinc finger domain-containing protein 10-like isoform X26.9e-5769.23Show/hide
Query:  RSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIPVFGAG
        RS+  V+ LRSNN RLRDVADDPQQVLDICNNNERYME+IH +YD+PIVPPP++  RVRVEE ELDEVYH V+EV  MTQTQ+QTGY             
Subjt:  RSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIPVFGAG

Query:  YYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG
            GVGPSSSYMDV PST YM  HGHER   EHNEYLY+EAP DV D QEYQQ+PENQE+  Q RVQSR RQP +NRRRPG
Subjt:  YYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein1.5e-6772.45Show/hide
Query:  RLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIP
        RLYITR  A V HLRSNN RLRDV +DPQQVLDICNNNERYME IH +YD+PIVPPPV+ ER RVEE ELDEVYHNVEEVP  TQTQ+QTGYGSPM M+P
Subjt:  RLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIP

Query:  VFGA---------GYYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG
         FGA         GYYD+ VGP SSYMDV PST YM+GHG  R  GEHNEYLY+EAPTDV D QEYQQ+P+NQE+  Q RVQSR RQP RNR+  G
Subjt:  VFGA---------GYYDSGVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTCTACATCACTCGATCAAAAGCAGCTGTGAGTCATCTTAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGACATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACATGGAACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAG
TTTACCATAACGTAGAAGAAGTACCTCTAATGACACAAACACAGAACCAAACTGGTTATGGTAGCCCGATGATGATGATCCCAGTATTTGGAGCAGGATATTATGACTCA
GGGGTCGGTCCATCGTCTTCATACATGGATGTCAGACCATCAACTTTTTACATGCATGGACATGGACACGAACGCGACCGCGGAGAACATAACGAATATCTGTACTATGA
AGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAAAACCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAGTCGACTACGACAACCAATCCGAAATC
GACGACGTCCGGGTGTGGAACACATTGATTTTCTTTTATATTTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTCTACATCACTCGATCAAAAGCAGCTGTGAGTCATCTTAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGACATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACATGGAACGTGTTCGAGTGGAAGAACCTGAACTCGATGAAG
TTTACCATAACGTAGAAGAAGTACCTCTAATGACACAAACACAGAACCAAACTGGTTATGGTAGCCCGATGATGATGATCCCAGTATTTGGAGCAGGATATTATGACTCA
GGGGTCGGTCCATCGTCTTCATACATGGATGTCAGACCATCAACTTTTTACATGCATGGACATGGACACGAACGCGACCGCGGAGAACATAACGAATATCTGTACTATGA
AGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAAAACCAGAGAATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAGTCGACTACGACAACCAATCCGAAATC
GACGACGTCCGGGTGTGGAACACATTGATTTTCTTTTATATTTTAAATGA
Protein sequenceShow/hide protein sequence
MRLYITRSKAAVSHLRSNNRRLRDVADDPQQVLDICNNNERYMEDIHYMYDVPIVPPPVNMERVRVEEPELDEVYHNVEEVPLMTQTQNQTGYGSPMMMIPVFGAGYYDS
GVGPSSSYMDVRPSTFYMHGHGHERDRGEHNEYLYYEAPTDVPDPQEYQQKPENQEELGQPRVQSRLRQPIRNRRRPGVEHIDFLLYFK