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PI0009742 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009742
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr07:12958463..12959566
RNA-Seq ExpressionPI0009742
SyntenyPI0009742
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]1.2e-2043.31Show/hide
Query:  VVNKFYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVETPGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRK
        V+N FY    N +     + GK+V+F  + +  LY L     T  +     P+    + ALE +AWPG  WDITP +KYQL PH L T A+VWL FIK+ 
Subjt:  VVNKFYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVETPGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRK

Query:  IFPTRHDSSITFESAMLLYCILKRCGL
        + PTRHD++I+ E  MLLYCI++   L
Subjt:  IFPTRHDSSITFESAMLLYCILKRCGL

KAA0049609.1 transposase [Cucumis melo var. makuwa]6.2e-2250.44Show/hide
Query:  PNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVET-PGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFPTRHDS
        P  +E    +  + V F+ E I +LY+LPND+   PG   +V   +  A+K +++I WP A    TPTR+ QL PHQLT EANVWLFFIK+KIFPT HDS
Subjt:  PNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVET-PGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFPTRHDS

Query:  SITFESAMLLYCI
        +I  E A++LYCI
Subjt:  SITFESAMLLYCI

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]3.0e-2446.4Show/hide
Query:  MDVVNKFYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVETPGHECMVRPTKNMARKALEVIAWPGAAWDITPTR-KYQLHPHQLTTEANVWLFFI
        MDVV+KFY  K N  +  + +  +   F+ E I +LY  PND E  G E + + TK +A++AL+V+AWPG   ++ P + +YQL+PH LTT+ANVW+FF 
Subjt:  MDVVNKFYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVETPGHECMVRPTKNMARKALEVIAWPGAAWDITPTR-KYQLHPHQLTTEANVWLFFI

Query:  KRKIFPTRHDSSITFESAMLLYCIL
        K KIFPT +DS+I+ +  ++LYCI+
Subjt:  KRKIFPTRHDSSITFESAMLLYCIL

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]6.2e-2250.44Show/hide
Query:  PNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVET-PGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFPTRHDS
        P  +E    +  + V F+ E I +LY+LPND+   PG   +V   +  A+K +++I WP A    TPTR+ QL PHQLT EANVWLFFIK+KIFPT HDS
Subjt:  PNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVET-PGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFPTRHDS

Query:  SITFESAMLLYCI
        +I  E A++LYCI
Subjt:  SITFESAMLLYCI

TYK22187.1 hypothetical protein E5676_scaffold333G00570 [Cucumis melo var. makuwa]3.6e-2247.86Show/hide
Query:  FYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVET-PGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFP
        FY +K ++ E  + +  K VSF+ E I +LY L ND+++ P    +  PTK  +R  +++IAW GA W  T TR  QL+PHQLTTEANVWL FIK+KI P
Subjt:  FYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVET-PGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFP

Query:  TRHDSSITFESAMLLYC
          +DS++  E  +LLYC
Subjt:  TRHDSSITFESAMLLYC

TrEMBL top hitse value%identityAlignment
A0A5A7TZE0 Protein MNN4-like5.7e-2143.31Show/hide
Query:  VVNKFYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVETPGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRK
        V+N FY    N +     + GK+V+F  + +  LY L     T  +     P+    + ALE +AWPG  WDITP +KYQL PH L T A+VWL FIK+ 
Subjt:  VVNKFYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVETPGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRK

Query:  IFPTRHDSSITFESAMLLYCILKRCGL
        + PTRHD++I+ E  MLLYCI++   L
Subjt:  IFPTRHDSSITFESAMLLYCILKRCGL

A0A5A7U806 Transposase3.0e-2250.44Show/hide
Query:  PNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVET-PGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFPTRHDS
        P  +E    +  + V F+ E I +LY+LPND+   PG   +V   +  A+K +++I WP A    TPTR+ QL PHQLT EANVWLFFIK+KIFPT HDS
Subjt:  PNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVET-PGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFPTRHDS

Query:  SITFESAMLLYCI
        +I  E A++LYCI
Subjt:  SITFESAMLLYCI

A0A5A7V6M5 Gag/pol protein1.4e-2446.4Show/hide
Query:  MDVVNKFYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVETPGHECMVRPTKNMARKALEVIAWPGAAWDITPTR-KYQLHPHQLTTEANVWLFFI
        MDVV+KFY  K N  +  + +  +   F+ E I +LY  PND E  G E + + TK +A++AL+V+AWPG   ++ P + +YQL+PH LTT+ANVW+FF 
Subjt:  MDVVNKFYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVETPGHECMVRPTKNMARKALEVIAWPGAAWDITPTR-KYQLHPHQLTTEANVWLFFI

Query:  KRKIFPTRHDSSITFESAMLLYCIL
        K KIFPT +DS+I+ +  ++LYCI+
Subjt:  KRKIFPTRHDSSITFESAMLLYCIL

A0A5D3CVL7 Uncharacterized protein3.0e-2250.44Show/hide
Query:  PNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVET-PGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFPTRHDS
        P  +E    +  + V F+ E I +LY+LPND+   PG   +V   +  A+K +++I WP A    TPTR+ QL PHQLT EANVWLFFIK+KIFPT HDS
Subjt:  PNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVET-PGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFPTRHDS

Query:  SITFESAMLLYCI
        +I  E A++LYCI
Subjt:  SITFESAMLLYCI

A0A5D3DES7 Uncharacterized protein1.8e-2247.86Show/hide
Query:  FYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVET-PGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFP
        FY +K ++ E  + +  K VSF+ E I +LY L ND+++ P    +  PTK  +R  +++IAW GA W  T TR  QL+PHQLTTEANVWL FIK+KI P
Subjt:  FYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVET-PGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFP

Query:  TRHDSSITFESAMLLYC
          +DS++  E  +LLYC
Subjt:  TRHDSSITFESAMLLYC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTGGTCAATAAATTTTATGTCTCTAAACCTAATGCTAAGGAGTTTAGCATGCAACTAACTGGAAAGGTGGTGAGCTTCAGTGCGGAGGCAATCGGTGACTTGTA
TGAATTGCCCAATGATGTTGAAACACCTGGGCATGAGTGTATGGTCAGGCCTACGAAGAATATGGCCCGTAAAGCACTGGAGGTAATCGCCTGGCCTGGGGCGGCATGGG
ATATAACGCCTACTCGGAAGTATCAGTTGCATCCACACCAGCTGACCACTGAAGCGAATGTGTGGCTTTTCTTCATCAAAAGGAAGATATTTCCCACGCGCCATGATAGC
TCCATCACCTTCGAATCTGCGATGCTTCTATATTGCATCTTGAAGAGATGCGGCCTTTGCACCCTAATGGCTTTAAATCGCCTAATCACTATCCATGCTCACAAGGAGAT
GGATAGGCGGTTAGAGACACTTGGCCATGCAGATGAAGAAAAGGGTGAGACTCAGGTACAATCCCTCAAGAGGAAAGCCCCTCATACCGCATCAACCCCCAAGCTTACCA
TAAAAAAGCCAAAGGTTGATGCAAAGGCCCAACCCAAGCCCCTCAAAATACTTCATCCATCCACGCACCCTGAAAAACGAGCTCCCGCAAAAGTCCAAAAGCCACAAAAA
GAACCCAACCTCTCTCTTTCCTTTAGCTTTTCTTCACCCATTCCATCACCATGCCTTTTATCTCCTCGCCTCCCTTCCTCCACTCCGCCTAAAACCACATCTCCCAACCT
TTCCACACTTGTACCTTCCCCAAGGCGAGCTAGTACATTATCGCGTTTTAATCTCTCGCCCATCATTGACCTTTTCCACCTTCGCACTAACCAGCCCCCTGCCGCCACTG
AGGCCGTTGAGGTGCCCTCTACAGCGTCCCTCTCTAATTCTTATTCTTTTCGAAGAGGACACCAACCCAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTGGTCAATAAATTTTATGTCTCTAAACCTAATGCTAAGGAGTTTAGCATGCAACTAACTGGAAAGGTGGTGAGCTTCAGTGCGGAGGCAATCGGTGACTTGTA
TGAATTGCCCAATGATGTTGAAACACCTGGGCATGAGTGTATGGTCAGGCCTACGAAGAATATGGCCCGTAAAGCACTGGAGGTAATCGCCTGGCCTGGGGCGGCATGGG
ATATAACGCCTACTCGGAAGTATCAGTTGCATCCACACCAGCTGACCACTGAAGCGAATGTGTGGCTTTTCTTCATCAAAAGGAAGATATTTCCCACGCGCCATGATAGC
TCCATCACCTTCGAATCTGCGATGCTTCTATATTGCATCTTGAAGAGATGCGGCCTTTGCACCCTAATGGCTTTAAATCGCCTAATCACTATCCATGCTCACAAGGAGAT
GGATAGGCGGTTAGAGACACTTGGCCATGCAGATGAAGAAAAGGGTGAGACTCAGGTACAATCCCTCAAGAGGAAAGCCCCTCATACCGCATCAACCCCCAAGCTTACCA
TAAAAAAGCCAAAGGTTGATGCAAAGGCCCAACCCAAGCCCCTCAAAATACTTCATCCATCCACGCACCCTGAAAAACGAGCTCCCGCAAAAGTCCAAAAGCCACAAAAA
GAACCCAACCTCTCTCTTTCCTTTAGCTTTTCTTCACCCATTCCATCACCATGCCTTTTATCTCCTCGCCTCCCTTCCTCCACTCCGCCTAAAACCACATCTCCCAACCT
TTCCACACTTGTACCTTCCCCAAGGCGAGCTAGTACATTATCGCGTTTTAATCTCTCGCCCATCATTGACCTTTTCCACCTTCGCACTAACCAGCCCCCTGCCGCCACTG
AGGCCGTTGAGGTGCCCTCTACAGCGTCCCTCTCTAATTCTTATTCTTTTCGAAGAGGACACCAACCCAGATGA
Protein sequenceShow/hide protein sequence
MDVVNKFYVSKPNAKEFSMQLTGKVVSFSAEAIGDLYELPNDVETPGHECMVRPTKNMARKALEVIAWPGAAWDITPTRKYQLHPHQLTTEANVWLFFIKRKIFPTRHDS
SITFESAMLLYCILKRCGLCTLMALNRLITIHAHKEMDRRLETLGHADEEKGETQVQSLKRKAPHTASTPKLTIKKPKVDAKAQPKPLKILHPSTHPEKRAPAKVQKPQK
EPNLSLSFSFSSPIPSPCLLSPRLPSSTPPKTTSPNLSTLVPSPRRASTLSRFNLSPIIDLFHLRTNQPPAATEAVEVPSTASLSNSYSFRRGHQPR