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PI0009799 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009799
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:10068426..10068890
RNA-Seq ExpressionPI0009799
SyntenyPI0009799
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038320.1 retrotransposon protein [Cucumis melo var. makuwa]3.4e-3460.47Show/hide
Query:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM
        MYSQGL+MSPD+++GTR+ R++EGR  SSGSK KRGGQA +   + R+A++Y N+QL  IAEWP  QRQDAS TH EVV+QL+ IP+L+ +DR   M I+
Subjt:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM

Query:  MCNVDDMKAFLDIPDELKLDYYTVILQDN
        M NVDDMKAFLD+PD +K  Y  +ILQ+N
Subjt:  MCNVDDMKAFLDIPDELKLDYYTVILQDN

KAA0050216.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-3560.47Show/hide
Query:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM
        MYSQGL+MSPDD+MGTR+ R+SE R   SGSKRKR G A +   I+R+A++Y N+Q+  IAEWP  QRQDAS T  E+V+QL+ IPEL+ +DR R M I+
Subjt:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM

Query:  MCNVDDMKAFLDIPDELKLDYYTVILQDN
        M NVDDMKAFL++PD +K  YY +ILQ+N
Subjt:  MCNVDDMKAFLDIPDELKLDYYTVILQDN

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-4171.54Show/hide
Query:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM
        MYSQG+DM  DDIMGTR  R +EGR GSSGSKRK+GGQA+E  +IIR+ M+++ND+LKAI EW   QRQDAS    EVV+QLQ IPELSR DRVR M+I+
Subjt:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM

Query:  MCNVDDMKAFLDIPDELKLDYYTVILQDNA
        MCNVDDMKAFLDI DELKLDY T+I QDNA
Subjt:  MCNVDDMKAFLDIPDELKLDYYTVILQDNA

KAA0063726.1 retrotransposon protein [Cucumis melo var. makuwa]4.3e-3763.57Show/hide
Query:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM
        MYSQGL+MSPDD+MGTR+ R+SE R  SSGSKRKR G A +   I+R+A++Y N+QL  IAEWP  QRQ+AS T  EVV+QL+ IPEL  +DR R M I+
Subjt:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM

Query:  MCNVDDMKAFLDIPDELKLDYYTVILQDN
        MCNVDDMKAFLD+PD +K  YY +ILQ+N
Subjt:  MCNVDDMKAFLDIPDELKLDYYTVILQDN

TYK10954.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-3662.79Show/hide
Query:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM
        MYSQGL+MSPDD+MGTR+ R+SE R  SSGSKRKR G A +   I+R+A++Y N+QL  IAEWP  QRQ+AS T  EVV++L+ IPEL  +DR R M I+
Subjt:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM

Query:  MCNVDDMKAFLDIPDELKLDYYTVILQDN
        MCNVDDMKAFLD+PD +K  YY +ILQ+N
Subjt:  MCNVDDMKAFLDIPDELKLDYYTVILQDN

TrEMBL top hitse value%identityAlignment
A0A5A7T4M9 Retrotransposon protein1.7e-3460.47Show/hide
Query:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM
        MYSQGL+MSPD+++GTR+ R++EGR  SSGSK KRGGQA +   + R+A++Y N+QL  IAEWP  QRQDAS TH EVV+QL+ IP+L+ +DR   M I+
Subjt:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM

Query:  MCNVDDMKAFLDIPDELKLDYYTVILQDN
        M NVDDMKAFLD+PD +K  Y  +ILQ+N
Subjt:  MCNVDDMKAFLDIPDELKLDYYTVILQDN

A0A5A7U7R0 Retrotransposon protein3.4e-3560.47Show/hide
Query:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM
        MYSQGL+MSPDD+MGTR+ R+SE R   SGSKRKR G A +   I+R+A++Y N+Q+  IAEWP  QRQDAS T  E+V+QL+ IPEL+ +DR R M I+
Subjt:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM

Query:  MCNVDDMKAFLDIPDELKLDYYTVILQDN
        M NVDDMKAFL++PD +K  YY +ILQ+N
Subjt:  MCNVDDMKAFLDIPDELKLDYYTVILQDN

A0A5A7V469 Retrotransposon protein6.3e-4271.54Show/hide
Query:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM
        MYSQG+DM  DDIMGTR  R +EGR GSSGSKRK+GGQA+E  +IIR+ M+++ND+LKAI EW   QRQDAS    EVV+QLQ IPELSR DRVR M+I+
Subjt:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM

Query:  MCNVDDMKAFLDIPDELKLDYYTVILQDNA
        MCNVDDMKAFLDI DELKLDY T+I QDNA
Subjt:  MCNVDDMKAFLDIPDELKLDYYTVILQDNA

A0A5A7VBC5 Retrotransposon protein2.1e-3763.57Show/hide
Query:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM
        MYSQGL+MSPDD+MGTR+ R+SE R  SSGSKRKR G A +   I+R+A++Y N+QL  IAEWP  QRQ+AS T  EVV+QL+ IPEL  +DR R M I+
Subjt:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM

Query:  MCNVDDMKAFLDIPDELKLDYYTVILQDN
        MCNVDDMKAFLD+PD +K  YY +ILQ+N
Subjt:  MCNVDDMKAFLDIPDELKLDYYTVILQDN

A0A5D3CIF5 Retrotransposon protein6.1e-3762.79Show/hide
Query:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM
        MYSQGL+MSPDD+MGTR+ R+SE R  SSGSKRKR G A +   I+R+A++Y N+QL  IAEWP  QRQ+AS T  EVV++L+ IPEL  +DR R M I+
Subjt:  MYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIPELSRLDRVRCMRIM

Query:  MCNVDDMKAFLDIPDELKLDYYTVILQDN
        MCNVDDMKAFLD+PD +K  YY +ILQ+N
Subjt:  MCNVDDMKAFLDIPDELKLDYYTVILQDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGTCGAACCTGCCTGCAGGATACGATGGATTTCCCGCGTATGATGGGAACGATATGGAGTTCCCACATGTACAGTCAAGGACTGGACATGTCACCTGACGACAT
AATGGGTACACGATCCGGTCGATTGTCTGAGGGTAGGATTGGTTCGAGTGGTTCGAAGAGGAAACGGGGAGGGCAGGCGTTGGAGGTGGCAAAAATTATTCGCAGTGCCA
TGAAATATGCTAATGACCAGTTGAAGGCCATTGCAGAATGGCCCAAAGAACAACGGCAAGATGCAAGCGTGACACATGCGGAAGTCGTTAAACAACTGCAGGGAATCCCA
GAGCTGAGTAGACTGGACAGGGTTCGTTGTATGCGTATAATGATGTGCAACGTGGATGACATGAAAGCATTTCTAGATATCCCGGACGAGCTTAAGTTGGATTACTACAC
GGTCATTCTCCAAGATAACGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGTCGAACCTGCCTGCAGGATACGATGGATTTCCCGCGTATGATGGGAACGATATGGAGTTCCCACATGTACAGTCAAGGACTGGACATGTCACCTGACGACAT
AATGGGTACACGATCCGGTCGATTGTCTGAGGGTAGGATTGGTTCGAGTGGTTCGAAGAGGAAACGGGGAGGGCAGGCGTTGGAGGTGGCAAAAATTATTCGCAGTGCCA
TGAAATATGCTAATGACCAGTTGAAGGCCATTGCAGAATGGCCCAAAGAACAACGGCAAGATGCAAGCGTGACACATGCGGAAGTCGTTAAACAACTGCAGGGAATCCCA
GAGCTGAGTAGACTGGACAGGGTTCGTTGTATGCGTATAATGATGTGCAACGTGGATGACATGAAAGCATTTCTAGATATCCCGGACGAGCTTAAGTTGGATTACTACAC
GGTCATTCTCCAAGATAACGCTTGA
Protein sequenceShow/hide protein sequence
MVGRTCLQDTMDFPRMMGTIWSSHMYSQGLDMSPDDIMGTRSGRLSEGRIGSSGSKRKRGGQALEVAKIIRSAMKYANDQLKAIAEWPKEQRQDASVTHAEVVKQLQGIP
ELSRLDRVRCMRIMMCNVDDMKAFLDIPDELKLDYYTVILQDNA