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PI0009804 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009804
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr06:19522327..19522752
RNA-Seq ExpressionPI0009804
SyntenyPI0009804
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040518.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.1e-4276.81Show/hide
Query:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS
        +EQG VL KKS EQL+ES KG IIIR+N LF+NST AS+LS+KES LEVV VMM +VTTEA MVEME+KINFLMK VEERDHEIAALKD MKA+ETAESS
Subjt:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS

Query:  QTPVVKAYDKGKATLQENQ-TQQSIFVAFLSVQQLQDI
        +TPVVKA DKGK  +QENQ  QQSI VA LSVQQLQD+
Subjt:  QTPVVKAYDKGKATLQENQ-TQQSIFVAFLSVQQLQDI

KAA0066644.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.4e-4275.37Show/hide
Query:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS
        +EQGSVL KKS EQL+ES KGGIII++N LF+NST AS+LS+KES LEVV VMMA+VT EA M EMERKIN+LMK +EERDHEIAALKD +KA ETAESS
Subjt:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS

Query:  QTPVVKAYDKGKATLQENQTQQSIFVAFLSVQQL
        +TP VKA DKGK  LQENQTQQS+ V  LSVQQL
Subjt:  QTPVVKAYDKGKATLQENQTQQSIFVAFLSVQQL

TYJ96985.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]8.3e-4375.18Show/hide
Query:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS
        +EQGSVL KKS EQL+ES KGGIIIREN LF+NST AS+L +KES L+VV VMM ++TTEA MVE+ERKINFLMK VEERDHEIAALKD MKA ETAESS
Subjt:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS

Query:  QTPVVKAYDKGKATLQENQTQQSIFVAFLSVQQLQDI
        +T  +KA DKGK  LQENQTQQS+ +A LSVQQLQD+
Subjt:  QTPVVKAYDKGKATLQENQTQQSIFVAFLSVQQLQDI

TYK23445.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.1e-4276.81Show/hide
Query:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS
        +EQG VL KKS EQL+ES KG IIIR+N LF+NST AS+LS+KES LEVV VMM +VTTEA MVEME+KINFLMK VEERDHEIAALKD MKA+ETAESS
Subjt:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS

Query:  QTPVVKAYDKGKATLQENQ-TQQSIFVAFLSVQQLQDI
        +TPVVKA DKGK  +QENQ  QQSI VA LSVQQLQD+
Subjt:  QTPVVKAYDKGKATLQENQ-TQQSIFVAFLSVQQLQDI

TYK23838.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.1e-4276.09Show/hide
Query:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS
        +EQG VL KKS EQL+ES KGGIII +N LF+NST AS+LS+KES LEVV VMM +VT EA M EMERKINFLMK VEERDHEIAALKD MKA+ETAESS
Subjt:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS

Query:  QTPVVKAYDKGKATLQENQ-TQQSIFVAFLSVQQLQDI
        QTPVVKA DKGK  +QENQ  QQS+ VA LSVQQLQD+
Subjt:  QTPVVKAYDKGKATLQENQ-TQQSIFVAFLSVQQLQDI

TrEMBL top hitse value%identityAlignment
A0A5A7TC87 Ty3-gypsy retrotransposon protein1.5e-4276.81Show/hide
Query:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS
        +EQG VL KKS EQL+ES KG IIIR+N LF+NST AS+LS+KES LEVV VMM +VTTEA MVEME+KINFLMK VEERDHEIAALKD MKA+ETAESS
Subjt:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS

Query:  QTPVVKAYDKGKATLQENQ-TQQSIFVAFLSVQQLQDI
        +TPVVKA DKGK  +QENQ  QQSI VA LSVQQLQD+
Subjt:  QTPVVKAYDKGKATLQENQ-TQQSIFVAFLSVQQLQDI

A0A5A7VH30 Ty3-gypsy retrotransposon protein2.6e-4275.37Show/hide
Query:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS
        +EQGSVL KKS EQL+ES KGGIII++N LF+NST AS+LS+KES LEVV VMMA+VT EA M EMERKIN+LMK +EERDHEIAALKD +KA ETAESS
Subjt:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS

Query:  QTPVVKAYDKGKATLQENQTQQSIFVAFLSVQQL
        +TP VKA DKGK  LQENQTQQS+ V  LSVQQL
Subjt:  QTPVVKAYDKGKATLQENQTQQSIFVAFLSVQQL

A0A5D3BEV5 Ty3-gypsy retrotransposon protein4.0e-4375.18Show/hide
Query:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS
        +EQGSVL KKS EQL+ES KGGIIIREN LF+NST AS+L +KES L+VV VMM ++TTEA MVE+ERKINFLMK VEERDHEIAALKD MKA ETAESS
Subjt:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS

Query:  QTPVVKAYDKGKATLQENQTQQSIFVAFLSVQQLQDI
        +T  +KA DKGK  LQENQTQQS+ +A LSVQQLQD+
Subjt:  QTPVVKAYDKGKATLQENQTQQSIFVAFLSVQQLQDI

A0A5D3DIN4 Ty3-gypsy retrotransposon protein1.5e-4276.81Show/hide
Query:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS
        +EQG VL KKS EQL+ES KG IIIR+N LF+NST AS+LS+KES LEVV VMM +VTTEA MVEME+KINFLMK VEERDHEIAALKD MKA+ETAESS
Subjt:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS

Query:  QTPVVKAYDKGKATLQENQ-TQQSIFVAFLSVQQLQDI
        +TPVVKA DKGK  +QENQ  QQSI VA LSVQQLQD+
Subjt:  QTPVVKAYDKGKATLQENQ-TQQSIFVAFLSVQQLQDI

A0A5D3DK07 Ty3-gypsy retrotransposon protein1.5e-4276.09Show/hide
Query:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS
        +EQG VL KKS EQL+ES KGGIII +N LF+NST AS+LS+KES LEVV VMM +VT EA M EMERKINFLMK VEERDHEIAALKD MKA+ETAESS
Subjt:  EEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESS

Query:  QTPVVKAYDKGKATLQENQ-TQQSIFVAFLSVQQLQDI
        QTPVVKA DKGK  +QENQ  QQS+ VA LSVQQLQD+
Subjt:  QTPVVKAYDKGKATLQENQ-TQQSIFVAFLSVQQLQDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAACAAGGTTCCGTTCTCACAAAAAAAAGTTGGGAACAACTGATGGAATCTCTTAAAGGCGGGATCATCATCAGAGAGAATCATTTGTTCGACAACTCTACTCT
TGCTTCTGATCTATCAGAGAAAGAATCTCAACTTGAAGTAGTGCCTGTCATGATGGCAAATGTAACAACTGAGGCAGCCATGGTAGAGATGGAAAGGAAAATAAATTTCC
TAATGAAAGCTGTCGAGGAGCGAGATCATGAAATCGCTGCCTTGAAAGATTATATGAAGGCCCATGAAACTGCTGAGTCGAGCCAAACTCCTGTTGTTAAAGCTTATGAT
AAAGGAAAAGCTACGTTGCAGGAAAACCAGACGCAACAGTCCATCTTCGTTGCCTTCCTATCAGTCCAACAGCTACAGGATATTGATAACTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAACAAGGTTCCGTTCTCACAAAAAAAAGTTGGGAACAACTGATGGAATCTCTTAAAGGCGGGATCATCATCAGAGAGAATCATTTGTTCGACAACTCTACTCT
TGCTTCTGATCTATCAGAGAAAGAATCTCAACTTGAAGTAGTGCCTGTCATGATGGCAAATGTAACAACTGAGGCAGCCATGGTAGAGATGGAAAGGAAAATAAATTTCC
TAATGAAAGCTGTCGAGGAGCGAGATCATGAAATCGCTGCCTTGAAAGATTATATGAAGGCCCATGAAACTGCTGAGTCGAGCCAAACTCCTGTTGTTAAAGCTTATGAT
AAAGGAAAAGCTACGTTGCAGGAAAACCAGACGCAACAGTCCATCTTCGTTGCCTTCCTATCAGTCCAACAGCTACAGGATATTGATAACTTGTAG
Protein sequenceShow/hide protein sequence
MEEQGSVLTKKSWEQLMESLKGGIIIRENHLFDNSTLASDLSEKESQLEVVPVMMANVTTEAAMVEMERKINFLMKAVEERDHEIAALKDYMKAHETAESSQTPVVKAYD
KGKATLQENQTQQSIFVAFLSVQQLQDIDNL