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PI0009812 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009812
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr05:18944338..18945699
RNA-Seq ExpressionPI0009812
SyntenyPI0009812
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.7e-7575.98Show/hide
Query:  IQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEV
        IQQFD DVTQEYIH Y NITRLYIT+ GA     RSNN RLRDV DD QQVLDICNNN+R+MEEIH MY +PIVPP ++RGRV+VEE ELDEVYHNVEE+
Subjt:  IQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEV

Query:  PPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPR
         P TQ Q+QTGYGSPM+MMP F  GYCD EV T Y DSGVGPSSSYMD  PSTSYMHGH H    GEHNEYLY+EAPT+V D QEYQQEPENQEEL Q R
Subjt:  PPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPR

Query:  VQSR
        VQSR
Subjt:  VQSR

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.2e-7482.08Show/hide
Query:  SIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEE
        SIQQFD DVTQEYIHWYNNITRLYITRP AAVGHLRSNN RLRDV DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNVEE
Subjt:  SIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEE

Query:  VPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYL
        VPP TQTQSQTGYGSPM MMP F AGY DSEVGTGY D+G+ PSS YMD  PS  YMHGH    G GEHN+YL
Subjt:  VPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.4e-9580.97Show/hide
Query:  IATRASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY
        +A R SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RLRDV DD QQ LDICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VY
Subjt:  IATRASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY

Query:  HNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPENQE
        HNVEEVP  TQTQSQTGYGSPM MMP FEAGYCD EVG GY D+GVGPSSSY+D  PSTSYMHGH    G GEHNEYLY+EAP DV D QEYQQEPENQE
Subjt:  HNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPENQE

Query:  ELGQPRVQSRQRQPTRNRRRPGSGTH
        +  Q RVQSR+RQPTRNRRRPG GTH
Subjt:  ELGQPRVQSRQRQPTRNRRRPGSGTH

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.8e-7582.66Show/hide
Query:  SIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEE
        SIQQFD DVTQEYIHWYNNITRLYITRPGAAVGHLRSNN RLRDV DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNVEE
Subjt:  SIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEE

Query:  VPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYL
        VPP TQTQSQTGYGSPM MMP F AGY DSEVGTGY D+G+ PSS YMD  PS  YMHGH    G GEHN+YL
Subjt:  VPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYL

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]6.9e-9378.17Show/hide
Query:  RRFIATRASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELD
        RRF+    SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN RLRDV +DPQQVLDICNNNERYME+IH +YD+PIVPPPV+R R RVEE ELD
Subjt:  RRFIATRASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELD

Query:  EVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPE
        EVYHNVEEVPP TQTQSQTGYGSPM MMP F AGYCDSEV  GY D+ VGP SSYMD  PSTSYM+GHG   G GEHNEYLY+EAPTDV D QEYQQEP+
Subjt:  EVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPE

Query:  NQEELGQPRVQSRQRQPTRNRRRPGSGTH
        NQE+  Q RVQSR+RQP RNR+  G GTH
Subjt:  NQEELGQPRVQSRQRQPTRNRRRPGSGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X18.3e-7675.98Show/hide
Query:  IQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEV
        IQQFD DVTQEYIH Y NITRLYIT+ GA     RSNN RLRDV DD QQVLDICNNN+R+MEEIH MY +PIVPP ++RGRV+VEE ELDEVYHNVEE+
Subjt:  IQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEEV

Query:  PPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPR
         P TQ Q+QTGYGSPM+MMP F  GYCD EV T Y DSGVGPSSSYMD  PSTSYMHGH H    GEHNEYLY+EAPT+V D QEYQQEPENQEEL Q R
Subjt:  PPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPR

Query:  VQSR
        VQSR
Subjt:  VQSR

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.6e-7482.08Show/hide
Query:  SIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEE
        SIQQFD DVTQEYIHWYNNITRLYITRP AAVGHLRSNN RLRDV DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNVEE
Subjt:  SIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEE

Query:  VPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYL
        VPP TQTQSQTGYGSPM MMP F AGY DSEVGTGY D+G+ PSS YMD  PS  YMHGH    G GEHN+YL
Subjt:  VPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYL

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.6e-9580.97Show/hide
Query:  IATRASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY
        +A R SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RLRDV DD QQ LDICNNNERYMEEIH MYD+PIVPPPV+RG VRVEE ELD+VY
Subjt:  IATRASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVY

Query:  HNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPENQE
        HNVEEVP  TQTQSQTGYGSPM MMP FEAGYCD EVG GY D+GVGPSSSY+D  PSTSYMHGH    G GEHNEYLY+EAP DV D QEYQQEPENQE
Subjt:  HNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPENQE

Query:  ELGQPRVQSRQRQPTRNRRRPGSGTH
        +  Q RVQSR+RQPTRNRRRPG GTH
Subjt:  ELGQPRVQSRQRQPTRNRRRPGSGTH

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.8e-7582.66Show/hide
Query:  SIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEE
        SIQQFD DVTQEYIHWYNNITRLYITRPGAAVGHLRSNN RLRDV DDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPV+RGRVRVEE ELDEVYHNVEE
Subjt:  SIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELDEVYHNVEE

Query:  VPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYL
        VPP TQTQSQTGYGSPM MMP F AGY DSEVGTGY D+G+ PSS YMD  PS  YMHGH    G GEHN+YL
Subjt:  VPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYL

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein3.3e-9378.17Show/hide
Query:  RRFIATRASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELD
        RRF+    SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN RLRDV +DPQQVLDICNNNERYME+IH +YD+PIVPPPV+R R RVEE ELD
Subjt:  RRFIATRASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRGRVRVEEPELD

Query:  EVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPE
        EVYHNVEEVPP TQTQSQTGYGSPM MMP F AGYCDSEV  GY D+ VGP SSYMD  PSTSYM+GHG   G GEHNEYLY+EAPTDV D QEYQQEP+
Subjt:  EVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPE

Query:  NQEELGQPRVQSRQRQPTRNRRRPGSGTH
        NQE+  Q RVQSR+RQP RNR+  G GTH
Subjt:  NQEELGQPRVQSRQRQPTRNRRRPGSGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTAGACGAGCACACGGTTCACGAAGATTCATTGCCACTAGAGCTTCGATTCAGCAATTTGATCAGGATGT
GACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTAAGATCGAACAACAGAAGACTTCGTGATGTTA
CAGATGATCCGCAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGA
CGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGAT
GATGCCAGCTTTTGAAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGCCAGACCATCAACTTCTT
ACATGCATGGACATGGACACGGATGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAG
AATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAGTCGACAACGACAACCAACCCGAAATCGACGACGTCCGGGTTCTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTAGACGAGCACACGGTTCACGAAGATTCATTGCCACTAGAGCTTCGATTCAGCAATTTGATCAGGATGT
GACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTAAGATCGAACAACAGAAGACTTCGTGATGTTA
CAGATGATCCGCAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACAGGGGA
CGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAGTACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGAT
GATGCCAGCTTTTGAAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAGGGGTCGGTCCATCGTCTTCATACATGGATGCCAGACCATCAACTTCTT
ACATGCATGGACATGGACACGGATGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAG
AATCAAGAGGAGCTAGGGCAACCAAGAGTTCAGAGTCGACAACGACAACCAACCCGAAATCGACGACGTCCGGGTTCTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MAPQLRHANDHLLPRRAHGSRRFIATRASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVTDDPQQVLDICNNNERYMEEIHYMYDVPIVPPPVNRG
RVRVEEPELDEVYHNVEEVPPVTQTQSQTGYGSPMMMMPAFEAGYCDSEVGTGYNDSGVGPSSSYMDARPSTSYMHGHGHGCGRGEHNEYLYYEAPTDVPDPQEYQQEPE
NQEELGQPRVQSRQRQPTRNRRRPGSGTH