; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009827 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009827
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr09:9080960..9082373
RNA-Seq ExpressionPI0009827
SyntenyPI0009827
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040852.1 hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa]1.3e-2339.73Show/hide
Query:  MLKSSYNQIKATLDTMASNNEEWDEDDFSNRRGGHGQSEEGMDNNVVVVLQGQMTVMQ------------------------------------------
        ML+SSY QIK TLD + +N++E  +DD   +    G+++ GMD NV+V LQGQ+T M+                                          
Subjt:  MLKSSYNQIKATLDTMASNNEEWDEDDFSNRRGGHGQSEEGMDNNVVVVLQGQMTVMQ------------------------------------------

Query:  ---------PSEIYGNI--ASDHRGEESGSHARYHNNRPQHSQHQ-QQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRP
                  S  Y N   A ++RG E+  H + H +RP +S  Q QQ TT TPS+ SS+  LL KYMQ+ DA +QSQ +SI NL++ LGQLA +FSGRP
Subjt:  ---------PSEIYGNI--ASDHRGEESGSHARYHNNRPQHSQHQ-QQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRP

Query:  QGSLPSNIETPNQAGGLEK
         GSLPSNIE PN   G+ K
Subjt:  QGSLPSNIETPNQAGGLEK

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]3.3e-1637.37Show/hide
Query:  NTLEDGKTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFSNR------RGGHGQSEEGMDNNVVVVLQGQ---------MTVMQPSEIYGNIASD
        NTL+   +A+ VF GGML+SSYNQIK  LDTMASN++EW ++ F +R      +G  G+ E+G+D +++V LQGQ         M ++Q + +  ++   
Subjt:  NTLEDGKTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFSNR------RGGHGQSEEGMDNNVVVVLQGQ---------MTVMQPSEIYGNIASD

Query:  HRGEESGSHARYHNNRPQHSQHQQQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETPNQ
         +  E G        R  H+ +     T   +   +    +          + SQASSI N+++QLGQL S+FS RP+ S PSN ETPNQ
Subjt:  HRGEESGSHARYHNNRPQHSQHQQQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETPNQ

TYK27798.1 hypothetical protein E5676_scaffold749G00200 [Cucumis melo var. makuwa]7.1e-1958.56Show/hide
Query:  PSEIYGNIASDHRGEESGSHARYHNNRPQHS-QHQQQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETP
        P  I G   S H G+ SG   R H +RP HS   QQQ TT TPS SSS+E L+  YM++NDALLQSQA+SI NL++Q+GQ+A +FS RPQ  LPSN E  
Subjt:  PSEIYGNIASDHRGEESGSHARYHNNRPQHS-QHQQQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETP

Query:  NQAGGLEKRSV
        NQAG L+KRSV
Subjt:  NQAGGLEKRSV

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]4.1e-1435.71Show/hide
Query:  DAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFSNRRGGHGQSEEG-MDNNVVVVLQGQMTVM---QPSEIYGNIASDHRGEESGSHARY---HNNRP
        DA   G +L  SYN+    L+T+ASNN +W     SN R    +   G ++ + +  L  QM  M    P+  +G   +      +     Y    + +P
Subjt:  DAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFSNRRGGHGQSEEG-MDNNVVVVLQGQMTVM---QPSEIYGNIASDHRGEESGSHARY---HNNRP

Query:  QHSQHQQQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETPNQAGGLEKRSV
        +HSQH Q       +  SS+E+L+  YM KNDA++QSQA+S+ NL++QLG LA+    RPQGSLPS+ E P + G  + +S+
Subjt:  QHSQHQQQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETPNQAGGLEKRSV

XP_038891676.1 uncharacterized protein LOC120081070 [Benincasa hispida]5.3e-1432.88Show/hide
Query:  DAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFSNR--RGGHGQSEEGMDNNVVVVLQGQ---MTVMQPSEIYGNIASD-------------------
        DA   GG++  SY + K  LD +A  N EW +D +  R  R    Q+   +D N +  L  Q   MT +  +   GN ++                    
Subjt:  DAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFSNR--RGGHGQSEEGMDNNVVVVLQGQ---MTVMQPSEIYGNIASD-------------------

Query:  ------------HRGEESGSHARYHNNR---------PQHSQHQQQHTT--TTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRP
                    HRG     H R +  +         P H  HQQ       T S+ S +ENLL +Y+ +NDALL+SQASSI NL++Q+ Q+AS    R 
Subjt:  ------------HRGEESGSHARYHNNR---------PQHSQHQQQHTT--TTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRP

Query:  QGSLPSNIETPNQAGGLEK
         G LPSN ETP    G EK
Subjt:  QGSLPSNIETPNQAGGLEK

TrEMBL top hitse value%identityAlignment
A0A5A7U1G5 Uncharacterized protein2.7e-1163.49Show/hide
Query:  IENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETPNQAGGLEKRSV
        +E LL +YMQ+NDALLQ+QA+SI NLK+QL QLAS+ SGRP+GSLP++ +TPN+ G   K SV
Subjt:  IENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETPNQAGGLEKRSV

A0A5D3CC26 Uncharacterized protein1.6e-1637.37Show/hide
Query:  NTLEDGKTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFSNR------RGGHGQSEEGMDNNVVVVLQGQ---------MTVMQPSEIYGNIASD
        NTL+   +A+ VF GGML+SSYNQIK  LDTMASN++EW ++ F +R      +G  G+ E+G+D +++V LQGQ         M ++Q + +  ++   
Subjt:  NTLEDGKTADAVFVGGMLKSSYNQIKATLDTMASNNEEWDEDDFSNR------RGGHGQSEEGMDNNVVVVLQGQ---------MTVMQPSEIYGNIASD

Query:  HRGEESGSHARYHNNRPQHSQHQQQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETPNQ
         +  E G        R  H+ +     T   +   +    +          + SQASSI N+++QLGQL S+FS RP+ S PSN ETPNQ
Subjt:  HRGEESGSHARYHNNRPQHSQHQQQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETPNQ

A0A5D3D2S0 Uncharacterized protein6.1e-2439.73Show/hide
Query:  MLKSSYNQIKATLDTMASNNEEWDEDDFSNRRGGHGQSEEGMDNNVVVVLQGQMTVMQ------------------------------------------
        ML+SSY QIK TLD + +N++E  +DD   +    G+++ GMD NV+V LQGQ+T M+                                          
Subjt:  MLKSSYNQIKATLDTMASNNEEWDEDDFSNRRGGHGQSEEGMDNNVVVVLQGQMTVMQ------------------------------------------

Query:  ---------PSEIYGNI--ASDHRGEESGSHARYHNNRPQHSQHQ-QQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRP
                  S  Y N   A ++RG E+  H + H +RP +S  Q QQ TT TPS+ SS+  LL KYMQ+ DA +QSQ +SI NL++ LGQLA +FSGRP
Subjt:  ---------PSEIYGNI--ASDHRGEESGSHARYHNNRPQHSQHQ-QQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRP

Query:  QGSLPSNIETPNQAGGLEK
         GSLPSNIE PN   G+ K
Subjt:  QGSLPSNIETPNQAGGLEK

A0A5D3D4Y1 Uncharacterized protein4.1e-1249.45Show/hide
Query:  AYMAHDLDRPTRSYAAPNRYNFNLGIAYPVHLIQRIKIRAFSVNSEDEVKRWANTLEDGKTADAVFVGGMLKSSYNQIKATLDTMASNNEE
        AY+AHDLDR  RSY + N+Y+FN GIAYP             V+ ED      + +   +TADAVFVGGML+SSYNQIK  L  MAS +++
Subjt:  AYMAHDLDRPTRSYAAPNRYNFNLGIAYPVHLIQRIKIRAFSVNSEDEVKRWANTLEDGKTADAVFVGGMLKSSYNQIKATLDTMASNNEE

A0A5D3DWD5 Uncharacterized protein3.5e-1958.56Show/hide
Query:  PSEIYGNIASDHRGEESGSHARYHNNRPQHS-QHQQQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETP
        P  I G   S H G+ SG   R H +RP HS   QQQ TT TPS SSS+E L+  YM++NDALLQSQA+SI NL++Q+GQ+A +FS RPQ  LPSN E  
Subjt:  PSEIYGNIASDHRGEESGSHARYHNNRPQHS-QHQQQHTTTTPSTSSSIENLLPKYMQKNDALLQSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETP

Query:  NQAGGLEKRSV
        NQAG L+KRSV
Subjt:  NQAGGLEKRSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGGAGGTAGAGAAATGCGCAAAGAATGGAGAATATAACAATAGGAATTTACCTCCGCCTCAAACTGCCCAAGAACAAAACGCGGCCTACATGGCGCATGACTT
GGATAGGCCAACTAGGTCATATGCTGCACCCAACCGCTACAACTTCAACCTAGGGATCGCCTACCCTGTGCATCTCATCCAAAGAATTAAGATTCGCGCTTTTTCCGTTA
ACTCTGAGGACGAGGTGAAAAGGTGGGCCAACACCTTGGAAGATGGCAAGACTGCTGATGCTGTGTTTGTAGGTGGTATGCTGAAGAGCTCATACAACCAGATTAAGGCA
ACGCTGGACACGATGGCCAGCAATAACGAAGAATGGGATGAAGATGATTTCAGCAATCGTCGAGGAGGACACGGACAAAGCGAAGAAGGAATGGATAATAATGTCGTGGT
GGTGTTGCAAGGACAAATGACTGTGATGCAACCTTCTGAAATCTATGGCAATATCGCAAGTGACCATCGCGGGGAAGAATCTGGCTCCCACGCGAGGTACCACAACAACA
GGCCACAACATTCCCAACATCAACAGCAACACACCACCACTACTCCATCCACTTCTTCATCTATTGAAAACCTCCTCCCCAAATATATGCAGAAGAACGATGCCCTTCTG
CAAAGCCAAGCTTCATCAATTCACAACCTAAAAGTACAGTTAGGGCAGTTAGCCAGCAACTTCTCTGGAAGGCCACAAGGATCCCTCCCAAGTAATATAGAAACGCCAAA
TCAGGCGGGGGGTCTGGAAAAGAGAAGTGTCACGCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGGAGGTAGAGAAATGCGCAAAGAATGGAGAATATAACAATAGGAATTTACCTCCGCCTCAAACTGCCCAAGAACAAAACGCGGCCTACATGGCGCATGACTT
GGATAGGCCAACTAGGTCATATGCTGCACCCAACCGCTACAACTTCAACCTAGGGATCGCCTACCCTGTGCATCTCATCCAAAGAATTAAGATTCGCGCTTTTTCCGTTA
ACTCTGAGGACGAGGTGAAAAGGTGGGCCAACACCTTGGAAGATGGCAAGACTGCTGATGCTGTGTTTGTAGGTGGTATGCTGAAGAGCTCATACAACCAGATTAAGGCA
ACGCTGGACACGATGGCCAGCAATAACGAAGAATGGGATGAAGATGATTTCAGCAATCGTCGAGGAGGACACGGACAAAGCGAAGAAGGAATGGATAATAATGTCGTGGT
GGTGTTGCAAGGACAAATGACTGTGATGCAACCTTCTGAAATCTATGGCAATATCGCAAGTGACCATCGCGGGGAAGAATCTGGCTCCCACGCGAGGTACCACAACAACA
GGCCACAACATTCCCAACATCAACAGCAACACACCACCACTACTCCATCCACTTCTTCATCTATTGAAAACCTCCTCCCCAAATATATGCAGAAGAACGATGCCCTTCTG
CAAAGCCAAGCTTCATCAATTCACAACCTAAAAGTACAGTTAGGGCAGTTAGCCAGCAACTTCTCTGGAAGGCCACAAGGATCCCTCCCAAGTAATATAGAAACGCCAAA
TCAGGCGGGGGGTCTGGAAAAGAGAAGTGTCACGCGGTGA
Protein sequenceShow/hide protein sequence
MKKEVEKCAKNGEYNNRNLPPPQTAQEQNAAYMAHDLDRPTRSYAAPNRYNFNLGIAYPVHLIQRIKIRAFSVNSEDEVKRWANTLEDGKTADAVFVGGMLKSSYNQIKA
TLDTMASNNEEWDEDDFSNRRGGHGQSEEGMDNNVVVVLQGQMTVMQPSEIYGNIASDHRGEESGSHARYHNNRPQHSQHQQQHTTTTPSTSSSIENLLPKYMQKNDALL
QSQASSIHNLKVQLGQLASNFSGRPQGSLPSNIETPNQAGGLEKRSVTR