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PI0009829 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009829
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr03:11315568..11316119
RNA-Seq ExpressionPI0009829
SyntenyPI0009829
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]3.9e-6173.3Show/hide
Query:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSDGPTT--------RDAKVI
        MWEDIQDKIMRTPFEYI RLRPEI TVLS I KI+AD LT LEEY NSYLK VD+FNDVQ SYSAQL   DK  QL+EKTS    T         DAKVI
Subjt:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSDGPTT--------RDAKVI

Query:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL
        QER  +LSLE+KELE RLQSIN +SEQLSILSC+K +AID++ELEVAKL+DEVNTLEST AITEEA +ALATV +SMEAAR+EF NFKW+L
Subjt:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL

KAA0043403.1 hypothetical protein E6C27_scaffold1639G00020 [Cucumis melo var. makuwa]1.9e-6071.2Show/hide
Query:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI
        MW+DIQDKI++TPFEYI RLRPEI TVLS+I KI+AD L+PLEEY NSYLK +D+FNDVQ SYSAQLL IDK  QLDEKTS              DAKVI
Subjt:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI

Query:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL
        QER  +LSLE+KEL+ RLQSIN +S+QLSILSC+K EAID++ELEV KL++EVNTLE TSAITEEA +ALATV RSMEAAR+EF N KWKL
Subjt:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL

KAA0060611.1 hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]1.5e-6072.25Show/hide
Query:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI
        MWEDIQDKIMRTPFEYI RLRPEI TVLS I KI+AD LT LEEY NSYLK VD+FNDVQ S+S QLL +DK  QL+EKTS              DAKVI
Subjt:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI

Query:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL
        QER  +LSLE+KELE RL+SIN +SEQLSILSC+K EAID++ELEVAKL+DEVNTLEST AITEEA +ALATV +SMEAAR+EF NFKW+L
Subjt:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]2.3e-6173.3Show/hide
Query:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI
        MWEDIQDKIMRTPFEYI RLRPEI TVLS I KI+AD LT LEEY NSYLK VD+FNDVQ SYSAQLL  DK  QL+EKTS              DAKVI
Subjt:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI

Query:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL
        QER  +LSLE+KELE RL+SIN +SEQLSILSC+K EAID++ELEVAKL+DEVNTLEST AITEEA +ALATV +SMEAAR+EF NFKW+L
Subjt:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]1.5e-6072.25Show/hide
Query:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI
        MWEDIQDKIMRTPFEYI RLRPEI TVLS I KI+AD LT LEEY NSYLK VD+FNDVQ S+S QLL +DK  QL+EKTS              DAKVI
Subjt:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI

Query:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL
        QER  +LSLE+KELE RL+SIN +SEQLSILSC+K EAID++ELEVAKL+DEVNTLEST AITEEA +ALATV +SMEAAR+EF NFKW+L
Subjt:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein1.9e-6173.3Show/hide
Query:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSDGPTT--------RDAKVI
        MWEDIQDKIMRTPFEYI RLRPEI TVLS I KI+AD LT LEEY NSYLK VD+FNDVQ SYSAQL   DK  QL+EKTS    T         DAKVI
Subjt:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSDGPTT--------RDAKVI

Query:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL
        QER  +LSLE+KELE RLQSIN +SEQLSILSC+K +AID++ELEVAKL+DEVNTLEST AITEEA +ALATV +SMEAAR+EF NFKW+L
Subjt:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL

A0A5A7TJ15 Uncharacterized protein9.4e-6171.2Show/hide
Query:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI
        MW+DIQDKI++TPFEYI RLRPEI TVLS+I KI+AD L+PLEEY NSYLK +D+FNDVQ SYSAQLL IDK  QLDEKTS              DAKVI
Subjt:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI

Query:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL
        QER  +LSLE+KEL+ RLQSIN +S+QLSILSC+K EAID++ELEV KL++EVNTLE TSAITEEA +ALATV RSMEAAR+EF N KWKL
Subjt:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL

A0A5A7V4F4 PMD domain-containing protein7.2e-6172.25Show/hide
Query:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI
        MWEDIQDKIMRTPFEYI RLRPEI TVLS I KI+AD LT LEEY NSYLK VD+FNDVQ S+S QLL +DK  QL+EKTS              DAKVI
Subjt:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI

Query:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL
        QER  +LSLE+KELE RL+SIN +SEQLSILSC+K EAID++ELEVAKL+DEVNTLEST AITEEA +ALATV +SMEAAR+EF NFKW+L
Subjt:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL

A0A5A7VHW8 PMD domain-containing protein1.1e-6173.3Show/hide
Query:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI
        MWEDIQDKIMRTPFEYI RLRPEI TVLS I KI+AD LT LEEY NSYLK VD+FNDVQ SYSAQLL  DK  QL+EKTS              DAKVI
Subjt:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI

Query:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL
        QER  +LSLE+KELE RL+SIN +SEQLSILSC+K EAID++ELEVAKL+DEVNTLEST AITEEA +ALATV +SMEAAR+EF NFKW+L
Subjt:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL

A0A5D3BRA8 PMD domain-containing protein7.2e-6172.25Show/hide
Query:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI
        MWEDIQDKIMRTPFEYI RLRPEI TVLS I KI+AD LT LEEY NSYLK VD+FNDVQ S+S QLL +DK  QL+EKTS              DAKVI
Subjt:  MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSD--------GPTTRDAKVI

Query:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL
        QER  +LSLE+KELE RL+SIN +SEQLSILSC+K EAID++ELEVAKL+DEVNTLEST AITEEA +ALATV +SMEAAR+EF NFKW+L
Subjt:  QERATQLSLEQKELESRLQSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGAGGACATTCAAGACAAGATCATGCGCACACCTTTTGAATATATCTCAAGACTTAGACCAGAAATAACAACTGTCCTTTCGAGAATTGTGAAGATCTATGCTGA
CAACCTGACTCCTCTTGAAGAATATTCGAATAGCTACCTTAAGATGGTAGACAGTTTCAACGATGTACAAGTTTCATATTCTGCACAGTTATTGTTGATAGATAAAATTC
ATCAATTAGACGAGAAGACATCTGATGGACCAACTACGAGAGATGCCAAAGTTATTCAGGAGAGGGCTACACAGTTATCTTTGGAACAGAAAGAACTGGAGAGTAGACTT
CAGAGTATAAATACTGATTCTGAACAGCTATCAATCTTATCTTGTAAGAAAAATGAGGCCATAGATAGGAAAGAACTAGAAGTTGCCAAGCTCAAAGACGAAGTCAACAC
TCTTGAAAGCACCTCTGCTATCACCGAAGAAGCCACCAAGGCCCTAGCTACGGTTTATAGGAGTATGGAGGCTGCACGCAAAGAATTCAATAACTTCAAATGGAAGCTTT
GA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGAGGACATTCAAGACAAGATCATGCGCACACCTTTTGAATATATCTCAAGACTTAGACCAGAAATAACAACTGTCCTTTCGAGAATTGTGAAGATCTATGCTGA
CAACCTGACTCCTCTTGAAGAATATTCGAATAGCTACCTTAAGATGGTAGACAGTTTCAACGATGTACAAGTTTCATATTCTGCACAGTTATTGTTGATAGATAAAATTC
ATCAATTAGACGAGAAGACATCTGATGGACCAACTACGAGAGATGCCAAAGTTATTCAGGAGAGGGCTACACAGTTATCTTTGGAACAGAAAGAACTGGAGAGTAGACTT
CAGAGTATAAATACTGATTCTGAACAGCTATCAATCTTATCTTGTAAGAAAAATGAGGCCATAGATAGGAAAGAACTAGAAGTTGCCAAGCTCAAAGACGAAGTCAACAC
TCTTGAAAGCACCTCTGCTATCACCGAAGAAGCCACCAAGGCCCTAGCTACGGTTTATAGGAGTATGGAGGCTGCACGCAAAGAATTCAATAACTTCAAATGGAAGCTTT
GA
Protein sequenceShow/hide protein sequence
MWEDIQDKIMRTPFEYISRLRPEITTVLSRIVKIYADNLTPLEEYSNSYLKMVDSFNDVQVSYSAQLLLIDKIHQLDEKTSDGPTTRDAKVIQERATQLSLEQKELESRL
QSINTDSEQLSILSCKKNEAIDRKELEVAKLKDEVNTLESTSAITEEATKALATVYRSMEAARKEFNNFKWKL