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PI0009835 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009835
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:3955610..3956175
RNA-Seq ExpressionPI0009835
SyntenyPI0009835
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032766.1 retrotransposon protein [Cucumis melo var. makuwa]1.9e-5165.43Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG
        M+AE++PG  + ATT IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KCI+AEK++FD+WV+SH A K LLNK FP+YD+L YVFGRDRATG  AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S D++   R  R SE R GSSGSKRKRG
Subjt:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG

KAA0033744.1 retrotransposon protein [Cucumis melo var. makuwa]1.9e-5165.43Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG
        M+AE++PG  + ATT IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KCI+AEK++FD+WV+SH A K LLNK FP+YD+L YVFGRDRATG  AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S D++   R  R SE R GSSGSKRKRG
Subjt:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG

KAA0066208.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-5166.05Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG
        M+AE++PG  + ATT IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KCIIAEK++FD+WV+SH A K LLNK FP+YD+L YVFGRDRATG  AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S D++   R  R SE R GSSGSKRKRG
Subjt:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG

TYK10915.1 retrotransposon protein [Cucumis melo var. makuwa]1.9e-5165.43Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG
        M+AE++PG  + ATT IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KCI+AEK++FD+WV+SH A K LLNK FP+YD+L YVFGRDRATG  AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S D++   R  R SE R GSSGSKRKRG
Subjt:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG

TYK21395.1 retrotransposon protein [Cucumis melo var. makuwa]1.9e-5165.43Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG
        M+AE++PG  + ATT IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KCI+AEK++FD+WV+SH A K LLNK FP+YD+L YVFGRDRATG  AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S D++   R  R SE R GSSGSKRKRG
Subjt:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG

TrEMBL top hitse value%identityAlignment
A0A5A7SRU1 Retrotransposon protein9.2e-5265.43Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG
        M+AE++PG  + ATT IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KCI+AEK++FD+WV+SH A K LLNK FP+YD+L YVFGRDRATG  AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S D++   R  R SE R GSSGSKRKRG
Subjt:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG

A0A5A7TRV1 Retrotransposon protein9.2e-5265.43Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG
        M+AE++PG  + ATT IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KCI+AEK++FD+WV+SH A K LLNK FP+YD+L YVFGRDRATG  AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S D++   R  R SE R GSSGSKRKRG
Subjt:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG

A0A5A7VES2 Retrotransposon protein7.0e-5266.05Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG
        M+AE++PG  + ATT IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KCIIAEK++FD+WV+SH A K LLNK FP+YD+L YVFGRDRATG  AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S D++   R  R SE R GSSGSKRKRG
Subjt:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG

A0A5D3CHA0 Retrotransposon protein9.2e-5265.43Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG
        M+AE++PG  + ATT IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KCI+AEK++FD+WV+SH A K LLNK FP+YD+L YVFGRDRATG  AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S D++   R  R SE R GSSGSKRKRG
Subjt:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG

A0A5D3DCZ1 Retrotransposon protein9.2e-5265.43Show/hide
Query:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG
        M+AE++PG  + ATT IDCRIKT+KR FQAI+EMRGP CSGFGWNDE KCI+AEK++FD+WV+SH A K LLNK FP+YD+L YVFGRDRATG  AETF 
Subjt:  MIAERMPGHNITATT-IDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFG

Query:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG
        DVGSN P  G++ F   DGN+ + P +YSQG+D+S D++   R  R SE R GSSGSKRKRG
Subjt:  DVGSNVP-PGFEGFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein1.5e-0630.49Show/hide
Query:  RIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFGD
        R+K +K  +Q+  +++    SGFGW+ E K   A  +++  ++K+H   K +  +   H++DL  +FG   ATG  A    D
Subjt:  RIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFGD

AT2G24960.2 unknown protein3.4e-0625.68Show/hide
Query:  RIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATG
        R K ++R +  I  +     +GF W+     +IA+ D++++++++H   +    K  P Y +LC++FG++ + G
Subjt:  RIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATG

AT4G02210.1 unknown protein6.8e-0725.97Show/hide
Query:  NITATTIDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFG
        N     +  R K+++R F AI  +      GF W++E + + A+ +++  ++K+H   +  + +  P+Y DLC + G
Subjt:  NITATTIDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFG

AT4G02210.2 unknown protein6.8e-0725.97Show/hide
Query:  NITATTIDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFG
        N     +  R K+++R F AI  +      GF W++E + + A+ +++  ++K+H   +  + +  P+Y DLC + G
Subjt:  NITATTIDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCCGAGAGAATGCCCGGACATAACATAACGGCTACGACAATAGATTGTCGGATCAAGACAATAAAAAGAGCATTCCAAGCGATATCTGAGATGAGGGGCCCGAC
GTGTAGTGGGTTCGGTTGGAATGATGAGTTGAAATGCATCATTGCCGAGAAAGACATGTTCGACAGTTGGGTGAAGAGTCATTCAGCCGTAAAGGACCTCCTAAACAAAC
ATTTTCCCCACTACGACGACCTTTGCTACGTGTTCGGAAGAGATCGTGCAACAGGAGGTCGAGCTGAAACCTTCGGCGATGTTGGGTCGAACGTGCCTCCAGGCTTCGAA
GGATTTACCCACTATGACGGGAACGATATGGAGAACCCGACGATGTACAGTCAGGGCCTGGACATGTCACCTGACAACATAATGACTCCACGATCGGTTCGTATGTCTGA
GGCTAGGCCTGGTTCGAGCGGGTCGAAGAGGAAACGGGGAGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGCCGAGAGAATGCCCGGACATAACATAACGGCTACGACAATAGATTGTCGGATCAAGACAATAAAAAGAGCATTCCAAGCGATATCTGAGATGAGGGGCCCGAC
GTGTAGTGGGTTCGGTTGGAATGATGAGTTGAAATGCATCATTGCCGAGAAAGACATGTTCGACAGTTGGGTGAAGAGTCATTCAGCCGTAAAGGACCTCCTAAACAAAC
ATTTTCCCCACTACGACGACCTTTGCTACGTGTTCGGAAGAGATCGTGCAACAGGAGGTCGAGCTGAAACCTTCGGCGATGTTGGGTCGAACGTGCCTCCAGGCTTCGAA
GGATTTACCCACTATGACGGGAACGATATGGAGAACCCGACGATGTACAGTCAGGGCCTGGACATGTCACCTGACAACATAATGACTCCACGATCGGTTCGTATGTCTGA
GGCTAGGCCTGGTTCGAGCGGGTCGAAGAGGAAACGGGGAGGGTAG
Protein sequenceShow/hide protein sequence
MIAERMPGHNITATTIDCRIKTIKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDMFDSWVKSHSAVKDLLNKHFPHYDDLCYVFGRDRATGGRAETFGDVGSNVPPGFE
GFTHYDGNDMENPTMYSQGLDMSPDNIMTPRSVRMSEARPGSSGSKRKRGG