CuGenDBv2

Gene ID	PI0009842
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Cell division control protein 48-like C isoform C
Genome location	chr03:7979128..7980859
RNA-Seq Expression	PI0009842
Synteny	PI0009842
Gene Ontology terms	GO:0042254 - ribosome biogenesis (biological process) GO:0051301 - cell division (biological process) GO:0051973 - positive regulation of telomerase activity (biological process) GO:0005634 - nucleus (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function) GO:1990275 - preribosome binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

CAB3473109.1 unnamed protein product [Digitaria exilis]

1.4e-11

59.68

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Query:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELDGIEKWRGVIYVIGATNSLEVID
        P++TW+DVGGL+ LR+ F R++VR +K P D C+LLIELDG  + +GV YVIGATN ++VID
Subjt:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELDGIEKWRGVIYVIGATNSLEVID

CAB3476881.1 unnamed protein product [Digitaria exilis]

1.9e-08

44.58

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Query:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGD---------------------YCELLIELDGIEKWRGVIYVIGATNSLEVID
        P++TW+DVGGL+ LR+EF R++VR +K P D                       +LLIELDG  + +GV YVIGATN ++VID
Subjt:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGD---------------------YCELLIELDGIEKWRGVIYVIGATNSLEVID

KAG6595581.1 Cell division control protein 48-like C, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-08

40.95

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Query:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDY----------------C---------------------------ELLIELDGIEKWRGVIYVIGATNS
        P++ WEDVGGLEQLR EF R++VRR+K+P DY                C                           +LLIELDG E+ RGV +VIGATN 
Subjt:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDY----------------C---------------------------ELLIELDGIEKWRGVIYVIGATNS

Query:  LEVID
         EV+D
Subjt:  LEVID

THF98301.1 hypothetical protein TEA_004876 [Camellia sinensis var. sinensis]

4.5e-10

47.62

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Query:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDY--------------C-------ELLIELDGIEKWRGVIYVIGATNSLEVIDC
        PN+ WEDV GL  LR+EF R++VRR+KYP DY              C       +LL ELDG ++  GV YVIGATN  +V+DC
Subjt:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDY--------------C-------ELLIELDGIEKWRGVIYVIGATNSLEVIDC

XP_037497874.1 cell division control protein 48 homolog C isoform X2 [Jatropha curcas]

9.9e-10

45.78

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Query:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDY---------------------CELLIELDGIEKWRGVIYVIGATNSLEVID
        PN+ WEDVGGLE +R EF  H+VRR+KYP DY                      +LLIELDG ++  G +++IGATN  EV+D
Subjt:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDY---------------------CELLIELDGIEKWRGVIYVIGATNSLEVID

TrEMBL top hits

e value

%identity

Alignment

A0A1R3GE70 Kinesin motor domain-containing protein

3.8e-07

33.9

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Query:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYC--------------------------------------------------------ELLIELDGIEK
        PN+ WEDVGGL+ LR+EF R++VRR+K+P DY                                                         +LLIELDG ++
Subjt:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYC--------------------------------------------------------ELLIELDGIEK

Query:  WRGVIYVIGATNSLEVID
         RGV YVIGATN  +V+D
Subjt:  WRGVIYVIGATNSLEVID

A0A2U1NQK5 Cell division cycle 48C

2.2e-07

62.5

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Query:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELD
        PN+ WEDVGGL+QLRREF R++VRR+KYP +Y E  ++L+
Subjt:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELD

A0A2U1NQK9 Cell division cycle 48C

2.2e-07

62.5

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Query:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELD
        PN+ WEDVGGL+QLRREF R++VRR+KYP +Y E  ++L+
Subjt:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELD

A0A4S4D7A4 Uncharacterized protein

2.2e-10

47.62

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Query:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDY--------------C-------ELLIELDGIEKWRGVIYVIGATNSLEVIDC
        PN+ WEDV GL  LR+EF R++VRR+KYP DY              C       +LL ELDG ++  GV YVIGATN  +V+DC
Subjt:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDY--------------C-------ELLIELDGIEKWRGVIYVIGATNSLEVIDC

A0A4S4D8I3 AAA domain-containing protein

2.6e-08

57.69

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Query:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELDGIEKWRGVIYVI
        PN+ WEDV GL  LR+EF R++V R+KYP DY ELLI+LDG ++ RGV  ++
Subjt:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELDGIEKWRGVIYVI

SwissProt top hits

e value

%identity

Alignment

Q5AWS6 Cell division control protein 48

2.2e-04

37.74

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Query:  MQFPNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELDGIEKWRGVIY
        ++ PN+ WED+GGLE+++RE    L+  ++YP D+ E   +  G+   RGV++
Subjt:  MQFPNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELDGIEKWRGVIY

Q9SS94 Cell division control protein 48 homolog C

1.7e-04

42.5

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Query:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELD
        P++ W+DVGGL+ LR +F+R++VR +K P  Y    ++L+
Subjt:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELD

Arabidopsis top hits

e value

%identity

Alignment

AT3G01610.1 cell division cycle 48C

1.2e-05

42.5

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Query:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELD
        P++ W+DVGGL+ LR +F+R++VR +K P  Y    ++L+
Subjt:  PNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELD

AT3G53230.1 ATPase, AAA-type, CDC48 protein

3.0e-04

35.85

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Query:  MQFPNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELDGIEKWRGVIY
        ++ PN++WED+GGLE ++RE    L   ++YP ++ E   E  G+   +GV++
Subjt:  MQFPNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELDGIEKWRGVIY

AT5G03340.1 ATPase, AAA-type, CDC48 protein

3.0e-04

35.85

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Query:  MQFPNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELDGIEKWRGVIY
        ++ PN++WED+GGLE ++RE    L   ++YP ++ E   E  G+   +GV++
Subjt:  MQFPNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELDGIEKWRGVIY

Sequences

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CDS sequence

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ATGCAATTCCCCAATATAACTTGGGAAGATGTTGGAGGCTTAGAACAACTAAGAAGAGAGTTTAGTCGCCATTTAGTTAGGCGTCTGAAGTATCCTGGAGATTATTGCGA
GTTACTTATAGAGTTAGACGGAATAGAAAAATGGCGAGGTGTGATCTATGTTATTGGCGCTACAAATAGTCTCGAAGTCATCGATTGCTACGGCCAGGTAGATTTGGCAA
CGTCCTTTTTGTTCCAGCACCTGGTCCAAATGAGCGAGGACTGGCCTTAA

mRNA sequence

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Protein sequence

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MQFPNITWEDVGGLEQLRREFSRHLVRRLKYPGDYCELLIELDGIEKWRGVIYVIGATNSLEVIDCYGQVDLATSFLFQHLVQMSEDWP

PI0009842 (gene) of Melon (PI 482460) v1 genome