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PI0009852 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009852
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr01:28571850..28572257
RNA-Seq ExpressionPI0009852
SyntenyPI0009852
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU28792.1 hypothetical protein TSUD_357780 [Trifolium subterraneum]5.2e-1840Show/hide
Query:  LFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEM-TDIKNIKYEDSNVMKIS----TIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHV
        +++  G+ II S+ IA  FF LT+ GW N     P + T I +   + S  M +     T MYK+G+ +++    +EC +CL+ +++ E +R+L +C HV
Subjt:  LFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEM-TDIKNIKYEDSNVMKIS----TIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHV

Query:  FHASCIDVWLYSHSNCPLCRTLLDHVACIN
        FH SCID WL SHS CPLCR+ +D V   N
Subjt:  FHASCIDVWLYSHSNCPLCRTLLDHVACIN

KAA0059407.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa]3.2e-6088.28Show/hide
Query:  SVLFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHA
        SVLFICSGVAI+CSLFIAL FFNL +LGWFNCC RSPEMTD+KNIKYEDSN++KISTIMYKK NKSE+TNIPSECALCLSP EDGECIR+L ACNHVFHA
Subjt:  SVLFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHA

Query:  SCIDVWLYSHSNCPLCRTLLDHVACING
        SCIDVWLYSHSNCPLCRT LDHVAC NG
Subjt:  SCIDVWLYSHSNCPLCRTLLDHVACING

KAE8646506.1 hypothetical protein Csa_015876 [Cucumis sativus]1.1e-5786.82Show/hide
Query:  SVLFICSGVAIICSLFIALFFFNLT-ILGWFNCCFRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFH
        SVLFICSG+AIICSL IAL FFNLT ILGWFNCC RSPEMT++KNIKYEDSN+MKISTIMYKK NKSE+TNI SECALCLSPYEDGECIR+L ACNHVFH
Subjt:  SVLFICSGVAIICSLFIALFFFNLT-ILGWFNCCFRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFH

Query:  ASCIDVWLYSHSNCPLCRTLLDHVACING
        ASCID+WLYSHSNCPLCRT L  VACING
Subjt:  ASCIDVWLYSHSNCPLCRTLLDHVACING

KAG7013994.1 E3 ubiquitin-protein ligase ATL6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4571.43Show/hide
Query:  SVLFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEMTD-IKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFH
        SV FICSG+AIICSL I+L FF+LTILGWFNCC  SP  T+ ++NIK E S++M+I T+ YKK N++E+TN  SEC LCLSP+EDGECIRQLP+CNHVFH
Subjt:  SVLFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEMTD-IKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFH

Query:  ASCIDVWLYSHSNCPLCRTLLDHVAC
        ASCIDVWL SHS CPLCRT + HVAC
Subjt:  ASCIDVWLYSHSNCPLCRTLLDHVAC

PNX96352.1 RING-H2 finger protein ATL52-like [Trifolium pratense]3.4e-1739.1Show/hide
Query:  SSVLFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEM-TDIKNIKYEDSNVMKIS----TIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPAC
        S  +++  G+ II S+ IA   F LT+ GW +     P + T + +   + S  M +     T MYK+G+ +E+    +EC +CLS +++ E +R+L +C
Subjt:  SSVLFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEM-TDIKNIKYEDSNVMKIS----TIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPAC

Query:  NHVFHASCIDVWLYSHSNCPLCRTLLDHVACIN
         HVFH SCID WL SHS CPLCR+ +D V   N
Subjt:  NHVFHASCIDVWLYSHSNCPLCRTLLDHVACIN

TrEMBL top hitse value%identityAlignment
A0A0A0KAX6 RING-type E3 ubiquitin transferase5.5e-5886.82Show/hide
Query:  SVLFICSGVAIICSLFIALFFFNLT-ILGWFNCCFRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFH
        SVLFICSG+AIICSL IAL FFNLT ILGWFNCC RSPEMT++KNIKYEDSN+MKISTIMYKK NKSE+TNI SECALCLSPYEDGECIR+L ACNHVFH
Subjt:  SVLFICSGVAIICSLFIALFFFNLT-ILGWFNCCFRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFH

Query:  ASCIDVWLYSHSNCPLCRTLLDHVACING
        ASCID+WLYSHSNCPLCRT L  VACING
Subjt:  ASCIDVWLYSHSNCPLCRTLLDHVACING

A0A2K3N066 RING-type E3 ubiquitin transferase1.6e-1739.1Show/hide
Query:  SSVLFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEM-TDIKNIKYEDSNVMKIS----TIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPAC
        S  +++  G+ II S+ IA   F LT+ GW +     P + T + +   + S  M +     T MYK+G+ +E+    +EC +CLS +++ E +R+L +C
Subjt:  SSVLFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEM-TDIKNIKYEDSNVMKIS----TIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPAC

Query:  NHVFHASCIDVWLYSHSNCPLCRTLLDHVACIN
         HVFH SCID WL SHS CPLCR+ +D V   N
Subjt:  NHVFHASCIDVWLYSHSNCPLCRTLLDHVACIN

A0A2N9J1M7 RING-type E3 ubiquitin transferase2.3e-1941.27Show/hide
Query:  GVAIICSLFIALFFFNLT--ILGWFNCCFRSP-EMTDIKNIKYEDS--NVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASC
        G+ +I S+ IAL F+NL   +L  +      P  +  +K   ++ S  N + ++T  YKKG ++ +    +EC +CLS +ED EC+ +LP C H FH  C
Subjt:  GVAIICSLFIALFFFNLT--ILGWFNCCFRSP-EMTDIKNIKYEDS--NVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASC

Query:  IDVWLYSHSNCPLCRTLLDHVACING
        ID+WLYSHS+CPLCRT +D ++  NG
Subjt:  IDVWLYSHSNCPLCRTLLDHVACING

A0A2Z6MV30 RING-type E3 ubiquitin transferase2.5e-1840Show/hide
Query:  LFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEM-TDIKNIKYEDSNVMKIS----TIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHV
        +++  G+ II S+ IA  FF LT+ GW N     P + T I +   + S  M +     T MYK+G+ +++    +EC +CL+ +++ E +R+L +C HV
Subjt:  LFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEM-TDIKNIKYEDSNVMKIS----TIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHV

Query:  FHASCIDVWLYSHSNCPLCRTLLDHVACIN
        FH SCID WL SHS CPLCR+ +D V   N
Subjt:  FHASCIDVWLYSHSNCPLCRTLLDHVACIN

A0A5D3BXP3 RING-type E3 ubiquitin transferase1.6e-6088.28Show/hide
Query:  SVLFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHA
        SVLFICSGVAI+CSLFIAL FFNL +LGWFNCC RSPEMTD+KNIKYEDSN++KISTIMYKK NKSE+TNIPSECALCLSP EDGECIR+L ACNHVFHA
Subjt:  SVLFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHA

Query:  SCIDVWLYSHSNCPLCRTLLDHVACING
        SCIDVWLYSHSNCPLCRT LDHVAC NG
Subjt:  SCIDVWLYSHSNCPLCRTLLDHVACING

SwissProt top hitse value%identityAlignment
Q7XLY8 E3 ubiquitin-protein ligase Os04g05909003.6e-1443.42Show/hide
Query:  EDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLLDHV
        +++ + KI+   Y++G+    T   ++C++CL  + DGE +R LP C+H FH  CID WL SHSNCPLCR  +  V
Subjt:  EDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLLDHV

Q8L9T5 RING-H2 finger protein ATL24.7e-1447.44Show/hide
Query:  DSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLLDHVACI
        D NV+K S  ++   +++ K   P ECA+CLS +E+ E  R LP C H FH  CID+W +SHS CPLCR+L++ +A I
Subjt:  DSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLLDHVACI

Q9FLC6 RING-H2 finger protein ATL732.8e-1452.46Show/hide
Query:  SECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCR-TLLDHVACINGNHQG
        +EC +CL  + +GE +R LP CNH FH  CID WL SHS+CP CR +LL+H    NG+ +G
Subjt:  SECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCR-TLLDHVACINGNHQG

Q9LF64 RING-H2 finger protein ATL522.8e-1441.11Show/hide
Query:  FRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLLDHV
        F S +          +S +  I+   YK G+        S+C++CLS +E+ E +R LP CNH FH  CID WL SHSNCPLCR  +  V
Subjt:  FRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLLDHV

Q9SRQ8 RING-H2 finger protein ATL511.4e-1343.84Show/hide
Query:  EDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLL
        ++S +  I+   Y+K +   ++   S+C++CLS +++ E +R LP CNH FH  CID WL SHSNCPLCR  +
Subjt:  EDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLL

Arabidopsis top hitse value%identityAlignment
AT1G72220.1 RING/U-box superfamily protein9.7e-1539.13Show/hide
Query:  IKNIKYEDSNVMKISTIMYKKGN-KSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLLDHVACINGNHQG
        I+    + S +  I+   YK+G+   E+T    +C +CL+ +E+ E +R LP CNH FH SCID WL SH+NCPLCR  +  ++     + G
Subjt:  IKNIKYEDSNVMKISTIMYKKGN-KSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLLDHVACINGNHQG

AT3G03550.1 RING/U-box superfamily protein9.7e-1543.84Show/hide
Query:  EDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLL
        ++S +  I+   Y+K +   ++   S+C++CLS +++ E +R LP CNH FH  CID WL SHSNCPLCR  +
Subjt:  EDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLL

AT3G16720.1 TOXICOS EN LEVADURA 23.3e-1547.44Show/hide
Query:  DSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLLDHVACI
        D NV+K S  ++   +++ K   P ECA+CLS +E+ E  R LP C H FH  CID+W +SHS CPLCR+L++ +A I
Subjt:  DSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLLDHVACI

AT5G05280.1 RING/U-box superfamily protein2.0e-1552.46Show/hide
Query:  SECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCR-TLLDHVACINGNHQG
        +EC +CL  + +GE +R LP CNH FH  CID WL SHS+CP CR +LL+H    NG+ +G
Subjt:  SECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCR-TLLDHVACINGNHQG

AT5G17600.1 RING/U-box superfamily protein2.0e-1541.11Show/hide
Query:  FRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLLDHV
        F S +          +S +  I+   YK G+        S+C++CLS +E+ E +R LP CNH FH  CID WL SHSNCPLCR  +  V
Subjt:  FRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLYSHSNCPLCRTLLDHV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCTGTCCTCTTCATCTGCTCCGGCGTTGCCATTATTTGCTCGCTGTTTATAGCCCTCTTTTTCTTCAACCTTACGATACTGGGATGGTTTAATTGCTGTTTCCG
TTCTCCCGAGATGACTGACATTAAGAATATTAAATATGAAGACTCAAATGTCATGAAGATCTCAACTATCATGTACAAGAAAGGAAACAAGAGTGAAAAAACTAATATTC
CAAGTGAGTGTGCTTTGTGCTTGTCACCTTATGAAGATGGGGAATGCATACGACAGCTTCCCGCCTGCAACCATGTCTTTCATGCTTCATGTATCGACGTATGGCTGTAT
TCACATTCAAACTGCCCGCTTTGCCGGACTCTACTCGACCATGTAGCTTGTATTAATGGGAATCATCAGGGATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCTGTCCTCTTCATCTGCTCCGGCGTTGCCATTATTTGCTCGCTGTTTATAGCCCTCTTTTTCTTCAACCTTACGATACTGGGATGGTTTAATTGCTGTTTCCG
TTCTCCCGAGATGACTGACATTAAGAATATTAAATATGAAGACTCAAATGTCATGAAGATCTCAACTATCATGTACAAGAAAGGAAACAAGAGTGAAAAAACTAATATTC
CAAGTGAGTGTGCTTTGTGCTTGTCACCTTATGAAGATGGGGAATGCATACGACAGCTTCCCGCCTGCAACCATGTCTTTCATGCTTCATGTATCGACGTATGGCTGTAT
TCACATTCAAACTGCCCGCTTTGCCGGACTCTACTCGACCATGTAGCTTGTATTAATGGGAATCATCAGGGATGGTGA
Protein sequenceShow/hide protein sequence
MSSVLFICSGVAIICSLFIALFFFNLTILGWFNCCFRSPEMTDIKNIKYEDSNVMKISTIMYKKGNKSEKTNIPSECALCLSPYEDGECIRQLPACNHVFHASCIDVWLY
SHSNCPLCRTLLDHVACINGNHQGW