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PI0009908 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009908
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTubulin-specific chaperone A
Genome locationchr11:476023..479337
RNA-Seq ExpressionPI0009908
SyntenyPI0009908
Gene Ontology termsGO:0007021 - tubulin complex assembly (biological process)
GO:0007023 - post-chaperonin tubulin folding pathway (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0048487 - beta-tubulin binding (molecular function)
InterPro domainsIPR004226 - Tubulin binding cofactor A
IPR036126 - Tubulin binding cofactor A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039980.1 tubulin-folding cofactor A [Cucumis melo var. makuwa]5.2e-4594.34Show/hide
Query:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST
        MATVKNLKIKTATCKRI+KELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLKEAL ELEKST++KGPEFDDARST
Subjt:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST

Query:  INDIES
        INDIES
Subjt:  INDIES

TYK24522.1 tubulin-folding cofactor A [Cucumis melo var. makuwa]4.7e-7879.63Show/hide
Query:  SSTVGP-SISF-LSSSSREKHLPRSLCAPLNLPDLPLTLAIISLAGRRVPAVNAVDPPRRNSRSATFLPSIPPHPITGFSGSSTAIFRARGLIVAILTGS
        SS+VGP S  F L     +KHLPRSLCAPL+LPDLPLTLA+ISLAGRRVPAV+AVD PRRNSR A  LPSIP HPITGFSGSS AI RA G      T  
Subjt:  SSTVGP-SISF-LSSSSREKHLPRSLCAPLNLPDLPLTLAIISLAGRRVPAVNAVDPPRRNSRSATFLPSIPPHPITGFSGSSTAIFRARGLIVAILTGS

Query:  WLWGKIYLLCMATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKK
            +I  L MATVKNLKIKTATCKRI+KELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLKEAL ELEKST++K
Subjt:  WLWGKIYLLCMATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKK

Query:  GPEFDDARSTINDIES
        GPEFDDARSTINDIES
Subjt:  GPEFDDARSTINDIES

XP_004145016.1 tubulin-folding cofactor A isoform X2 [Cucumis sativus]3.1e-4594.34Show/hide
Query:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST
        MATVKNLKIKTATCKRI+KELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLK+AL ELEKSTQ+KGPEFDDARST
Subjt:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST

Query:  INDIES
        IND+ES
Subjt:  INDIES

XP_008460084.1 PREDICTED: tubulin-folding cofactor A [Cucumis melo]1.2e-4493.4Show/hide
Query:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST
        MATVKNLKIKTATCKRI+KELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLKEAL +LEKST++KGPEFDDARST
Subjt:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST

Query:  INDIES
        INDIES
Subjt:  INDIES

XP_023006149.1 tubulin-folding cofactor A [Cucurbita maxima]2.9e-4393.4Show/hide
Query:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST
        MATVKNLKIKTATCKRIIKEL SYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLK  LDELEKSTQ KGPEFDDARS 
Subjt:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST

Query:  INDIES
        I +IES
Subjt:  INDIES

TrEMBL top hitse value%identityAlignment
A0A0A0KER0 Tubulin-specific chaperone A3.6e-6059.92Show/hide
Query:  MVEINIGWCRPYRH-FQISKYKESTNSCGSSTVGPSI----SFLSSSSREKHLPRSLCAPLNLPDLPLTLAIISLAG----------RRVPAVNAVDPPR
        M +IN  WCR  R  F+    KESTN CGSS VG SI     F  +     H               L+L    LAG          RR    +     R
Subjt:  MVEINIGWCRPYRH-FQISKYKESTNSCGSSTVGPSI----SFLSSSSREKHLPRSLCAPLNLPDLPLTLAIISLAG----------RRVPAVNAVDPPR

Query:  RNSRSATFLPSIPPHPITGFSGSSTAIFRARGLIVAILTGSWLWGKIYLLCMATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLK
         NS  A FLPSIPP+P TGFSGS  AI  A G      +      +I  L MATVKNLKIKTATCKRI+KELFSYEKEVEREAAKTADMKEKGADPYDLK
Subjt:  RNSRSATFLPSIPPHPITGFSGSSTAIFRARGLIVAILTGSWLWGKIYLLCMATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLK

Query:  QQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARSTINDIES
        QQENVLAESRMMVPDCHKRLE ALADLK+AL ELEKSTQ+KGPEFDDARSTIND+ES
Subjt:  QQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARSTINDIES

A0A1S3CBQ5 Tubulin-specific chaperone A5.6e-4593.4Show/hide
Query:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST
        MATVKNLKIKTATCKRI+KELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLKEAL +LEKST++KGPEFDDARST
Subjt:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST

Query:  INDIES
        INDIES
Subjt:  INDIES

A0A5A7T9L5 Tubulin-specific chaperone A2.5e-4594.34Show/hide
Query:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST
        MATVKNLKIKTATCKRI+KELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLKEAL ELEKST++KGPEFDDARST
Subjt:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST

Query:  INDIES
        INDIES
Subjt:  INDIES

A0A5D3DLX2 Tubulin-specific chaperone A2.3e-7879.63Show/hide
Query:  SSTVGP-SISF-LSSSSREKHLPRSLCAPLNLPDLPLTLAIISLAGRRVPAVNAVDPPRRNSRSATFLPSIPPHPITGFSGSSTAIFRARGLIVAILTGS
        SS+VGP S  F L     +KHLPRSLCAPL+LPDLPLTLA+ISLAGRRVPAV+AVD PRRNSR A  LPSIP HPITGFSGSS AI RA G      T  
Subjt:  SSTVGP-SISF-LSSSSREKHLPRSLCAPLNLPDLPLTLAIISLAGRRVPAVNAVDPPRRNSRSATFLPSIPPHPITGFSGSSTAIFRARGLIVAILTGS

Query:  WLWGKIYLLCMATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKK
            +I  L MATVKNLKIKTATCKRI+KELFSYEKEVEREA+KTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLE ALADLKEAL ELEKST++K
Subjt:  WLWGKIYLLCMATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKK

Query:  GPEFDDARSTINDIES
        GPEFDDARSTINDIES
Subjt:  GPEFDDARSTINDIES

A0A6J1KV46 Tubulin-specific chaperone A1.4e-4393.4Show/hide
Query:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST
        MATVKNLKIKTATCKRIIKEL SYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLK  LDELEKSTQ KGPEFDDARS 
Subjt:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST

Query:  INDIES
        I +IES
Subjt:  INDIES

SwissProt top hitse value%identityAlignment
O04350 Tubulin-folding cofactor A1.8e-4078.1Show/hide
Query:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST
        MAT++NLKIKT+TCKRI+KEL SYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRMM+PDCHKRLESALADLK  L ELE++ +K+GPE +DA+ T
Subjt:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST

Query:  INDIE
        + D+E
Subjt:  INDIE

O75347 Tubulin-specific chaperone A4.2e-1340.2Show/hide
Query:  VKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARSTIND
        V+ +KIKT   KR++KE   YEKE +++  K   M+ +  + YD+K+Q  +L ESRMM+PDC +RLE+A  DL+  L E EK  + +  E+ +AR  ++ 
Subjt:  VKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARSTIND

Query:  IE
        ++
Subjt:  IE

P48428 Tubulin-specific chaperone A1.2e-1239.22Show/hide
Query:  VKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARSTIND
        V+ +KIKT   +R++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+PDC +RLE+A  DL++ L E EK  + +  E+ +AR  ++ 
Subjt:  VKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARSTIND

Query:  IE
        ++
Subjt:  IE

P80585 Tubulin-specific chaperone A5.5e-1342.16Show/hide
Query:  VKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARSTIND
        ++ +KIKT   KR+ KE   YEKE +++  K   MK +  D Y +K+Q  +L ESRMM+PDC +RLE A ADL + L E EK  + +  E+ +ARS +  
Subjt:  VKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARSTIND

Query:  IE
        ++
Subjt:  IE

Q6PEC1 Tubulin-specific chaperone A4.2e-1340.2Show/hide
Query:  VKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARSTIND
        V+ +KIKT   KR++KE   YEKE +++  K   MK +  + Y +K+Q  +L ESRMM+PDC +RLE+A  DL++ L E EK  + +  E+ +AR  ++ 
Subjt:  VKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARSTIND

Query:  IE
        ++
Subjt:  IE

Arabidopsis top hitse value%identityAlignment
AT2G30410.1 tubulin folding cofactor A (KIESEL)1.3e-4178.1Show/hide
Query:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST
        MAT++NLKIKT+TCKRI+KEL SYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRMM+PDCHKRLESALADLK  L ELE++ +K+GPE +DA+ T
Subjt:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST

Query:  INDIE
        + D+E
Subjt:  INDIE

AT2G30410.2 tubulin folding cofactor A (KIESEL)1.3e-4178.1Show/hide
Query:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST
        MAT++NLKIKT+TCKRI+KEL SYEKEVEREAAKTADMK+KGADPYDLKQQENVL ESRMM+PDCHKRLESALADLK  L ELE++ +K+GPE +DA+ T
Subjt:  MATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELEKSTQKKGPEFDDARST

Query:  INDIE
        + D+E
Subjt:  INDIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAAATTAATATCGGATGGTGCAGACCATACAGACATTTTCAGATCTCAAAGTACAAAGAATCTACCAATTCTTGTGGCAGCTCTACAGTTGGGCCAAGTATTTC
ATTTTTAAGTTCTTCTTCACGCGAAAAACACCTCCCACGCTCTCTCTGCGCGCCGCTCAACTTGCCGGACCTCCCTCTCACTCTAGCGATCATCTCTCTCGCCGGACGTC
GAGTCCCAGCTGTGAACGCCGTCGACCCTCCGCGTAGGAACTCCCGCTCAGCCACGTTTCTTCCGTCTATACCGCCACACCCGATCACTGGTTTTTCTGGCTCGTCCACC
GCTATTTTTCGCGCGCGGGGCCTTATCGTTGCCATTCTCACCGGATCTTGGCTTTGGGGTAAGATTTATTTGTTGTGTATGGCTACTGTAAAGAACCTTAAGATTAAGAC
AGCGACCTGCAAACGCATTATCAAGGAGTTGTTTTCTTATGAGAAGGAGGTTGAGAGAGAAGCTGCCAAAACAGCTGACATGAAAGAAAAAGGTGCTGACCCTTATGACC
TTAAACAACAGGAAAATGTGTTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTTTAGAGTCCGCCTTAGCTGATCTGAAAGAAGCACTGGATGAACTGGAA
AAATCAACACAAAAGAAAGGTCCAGAGTTCGATGATGCTCGGAGTACAATCAACGATATTGAAAGTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAAATTAATATCGGATGGTGCAGACCATACAGACATTTTCAGATCTCAAAGTACAAAGAATCTACCAATTCTTGTGGCAGCTCTACAGTTGGGCCAAGTATTTC
ATTTTTAAGTTCTTCTTCACGCGAAAAACACCTCCCACGCTCTCTCTGCGCGCCGCTCAACTTGCCGGACCTCCCTCTCACTCTAGCGATCATCTCTCTCGCCGGACGTC
GAGTCCCAGCTGTGAACGCCGTCGACCCTCCGCGTAGGAACTCCCGCTCAGCCACGTTTCTTCCGTCTATACCGCCACACCCGATCACTGGTTTTTCTGGCTCGTCCACC
GCTATTTTTCGCGCGCGGGGCCTTATCGTTGCCATTCTCACCGGATCTTGGCTTTGGGGTAAGATTTATTTGTTGTGTATGGCTACTGTAAAGAACCTTAAGATTAAGAC
AGCGACCTGCAAACGCATTATCAAGGAGTTGTTTTCTTATGAGAAGGAGGTTGAGAGAGAAGCTGCCAAAACAGCTGACATGAAAGAAAAAGGTGCTGACCCTTATGACC
TTAAACAACAGGAAAATGTGTTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAAGCGTTTAGAGTCCGCCTTAGCTGATCTGAAAGAAGCACTGGATGAACTGGAA
AAATCAACACAAAAGAAAGGTCCAGAGTTCGATGATGCTCGGAGTACAATCAACGATATTGAAAGTTCCTAA
Protein sequenceShow/hide protein sequence
MVEINIGWCRPYRHFQISKYKESTNSCGSSTVGPSISFLSSSSREKHLPRSLCAPLNLPDLPLTLAIISLAGRRVPAVNAVDPPRRNSRSATFLPSIPPHPITGFSGSST
AIFRARGLIVAILTGSWLWGKIYLLCMATVKNLKIKTATCKRIIKELFSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLESALADLKEALDELE
KSTQKKGPEFDDARSTINDIESS