; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0009950 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009950
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationchr04:2051444..2053629
RNA-Seq ExpressionPI0009950
SyntenyPI0009950
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026565.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-4770.14Show/hide
Query:  MANSEDQGW----EDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRF
        M +S DQGW    E+   +++DDD+D++EIGF  +ER++R+  +  R G GGGR++V RCQ D CN +L GAR YHRRHKVCEFH+KAAVVILAGLEQRF
Subjt:  MANSEDQGW----EDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRF

Query:  CQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSST
        CQQCSRFH+VSEFD+TKRSCRRRLAGHNERRRK LPDFQGQSST
Subjt:  CQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSST

XP_004134953.1 squamosa promoter-binding protein 1 [Cucumis sativus]1.3e-6792.2Show/hide
Query:  MANSEDQGWEDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQC
        MANSEDQGWEDM+VDDDDDDNDNEEIGF DNERRRRSGLTS RGGGGGGRSTVARCQ DGCNA+LTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQC
Subjt:  MANSEDQGWEDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQC

Query:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSSTN
        SRFHA+SEFDDTKRSCR RLAGHNERRRKILPDF GQSSTN
Subjt:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSSTN

XP_008439842.1 PREDICTED: squamosa promoter-binding protein 1 [Cucumis melo]5.9e-6590.14Show/hide
Query:  MANSEDQGWEDMVV-DDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANS D  WEDM++ DDDDDDND EE+GF DNERRRRSGLT+GRGGGGGGRSTVARCQ DGCNA+LTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMVV-DDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSSTN
        CSRFHAVSEFDDTKRSCR RLAGHNERRRKILPDF GQSSTN
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSSTN

XP_023004048.1 squamosa promoter-binding-like protein 3 [Cucurbita maxima]1.7e-4871.13Show/hide
Query:  MANSEDQGWEDMV--VDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        M NS DQGW D V   +++++++D++E+GF ++ER++R+ ++S R G GGGR++VARCQ D CN +L GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQ
Subjt:  MANSEDQGWEDMV--VDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSST
        QCSRFH+VSEFD+TKRSCRRRLAGHNERRRK LPDFQGQSST
Subjt:  QCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSST

XP_038880830.1 squamosa promoter-binding protein 1-like [Benincasa hispida]8.0e-6287.23Show/hide
Query:  MANSEDQGWEDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQC
        M NSEDQ WEDMVV++DDD++DNEEIGF ++ERRRRS LT GRGG GGGR TVARCQ DGCNA+L+ ARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQC
Subjt:  MANSEDQGWEDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQC

Query:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSSTN
        SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDF GQSSTN
Subjt:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSSTN

TrEMBL top hitse value%identityAlignment
A0A0A0KK74 SBP-type domain-containing protein6.1e-6892.2Show/hide
Query:  MANSEDQGWEDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQC
        MANSEDQGWEDM+VDDDDDDNDNEEIGF DNERRRRSGLTS RGGGGGGRSTVARCQ DGCNA+LTGA+PYHRRHKVCEFH++AAVVILAGLEQRFCQQC
Subjt:  MANSEDQGWEDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQC

Query:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSSTN
        SRFHA+SEFDDTKRSCR RLAGHNERRRKILPDF GQSSTN
Subjt:  SRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSSTN

A0A1S3AZN8 squamosa promoter-binding protein 12.9e-6590.14Show/hide
Query:  MANSEDQGWEDMVV-DDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANS D  WEDM++ DDDDDDND EE+GF DNERRRRSGLT+GRGGGGGGRSTVARCQ DGCNA+LTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMVV-DDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSSTN
        CSRFHAVSEFDDTKRSCR RLAGHNERRRKILPDF GQSSTN
Subjt:  CSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSSTN

A0A5A7UDV9 Squamosa promoter-binding protein 15.2e-4388.35Show/hide
Query:  MANSEDQGWEDMVV-DDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANS D  WEDM++ DDDDDDND EE+GF DNERRRRSGLT+GRGGGGGGRSTVARCQ DGCNA+LTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSEDQGWEDMVV-DDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSR
        CSR
Subjt:  CSR

A0A6J1EFR3 Squamosa promoter-binding-like protein1.7e-4668.75Show/hide
Query:  MANSEDQGW----EDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRF
        M +S DQGW    E+   +++++D+D++EIGF  +ER++R+  +  R G GGGR++V RCQ D CN +L GAR YHRRHKVCEFH+KAAVVILAGLEQRF
Subjt:  MANSEDQGW----EDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRF

Query:  CQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSST
        CQQCSRFH+VSEFD+TKRSCRRRLAGHNERRRK LPDFQGQSST
Subjt:  CQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSST

A0A6J1KYC6 Squamosa promoter-binding-like protein8.3e-4971.13Show/hide
Query:  MANSEDQGWEDMV--VDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        M NS DQGW D V   +++++++D++E+GF ++ER++R+ ++S R G GGGR++VARCQ D CN +L GAR YHRRHKVCEFH+KAAVVILAGLEQRFCQ
Subjt:  MANSEDQGWEDMV--VDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSST
        QCSRFH+VSEFD+TKRSCRRRLAGHNERRRK LPDFQGQSST
Subjt:  QCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSST

SwissProt top hitse value%identityAlignment
A3C057 Squamosa promoter-binding-like protein 176.0e-2858.49Show/hide
Query:  SGLTSGRGGGGGGRSTVA----------RCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNER
        S  TS  GGG  G+   A          RCQV+GC  +L+G +PY+ RHKVC  HAK  +V++AGLEQRFCQQCSRFH + EFD  K+SCRRRLAGHNER
Subjt:  SGLTSGRGGGGGGRSTVA----------RCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNER

Query:  RRKILP
        RRK  P
Subjt:  RRKILP

Q01JD1 Squamosa promoter-binding-like protein 71.6e-2859.43Show/hide
Query:  GLTSGRGGGGGGRS--------------TVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGH
        G   G GGGGGG +               V RCQV+GC+  L G + YHRRHKVCE HAKA  V++ G EQRFCQQCSRFH ++EFDD K+SCRRRLAGH
Subjt:  GLTSGRGGGGGGRS--------------TVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGH

Query:  NERRRK
        NERRR+
Subjt:  NERRRK

Q2R3Y1 Putative squamosa promoter-binding-like protein 192.1e-2865.98Show/hide
Query:  RRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRK
        RR R G  SG GGGGGG +    C VDGC ++L+  R YHRRHKVCE HAK  VV++AG EQRFCQQCSRFH ++EFDD K+SCR+RL GHN RRRK
Subjt:  RRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRK

Q38741 Squamosa promoter-binding protein 14.9e-3060Show/hide
Query:  DNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRR
        +   EE    ++ ++ R+   SG+   G   ST   CQV+ C A +T A+PYHRRHKVCEFHAKA VV+ +GL+QRFCQQCSRFH +SEFD+ KRSCRRR
Subjt:  DNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRR

Query:  LAGHNERRRK
        LAGHNERRRK
Subjt:  LAGHNERRRK

Q7XT42 Squamosa promoter-binding-like protein 71.6e-2859.43Show/hide
Query:  GLTSGRGGGGGGRS--------------TVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGH
        G   G GGGGGG +               V RCQV+GC+  L G + YHRRHKVCE HAKA  V++ G EQRFCQQCSRFH ++EFDD K+SCRRRLAGH
Subjt:  GLTSGRGGGGGGRS--------------TVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGH

Query:  NERRRK
        NERRR+
Subjt:  NERRRK

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 86.1e-2867.05Show/hide
Query:  GRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRK
        G  G     ST  RCQ +GCNA+L+ A+ YHRRHKVCEFH+KA+ V+ AGL QRFCQQCSRFH +SEFD+ KRSCR+RLA HN RRRK
Subjt:  GRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRK

AT1G53160.1 squamosa promoter binding protein-like 43.6e-2857.5Show/hide
Query:  EDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEF
        EDM  D D++    EE+G    +R R S  +  RGG      ++  CQVD C A++  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQCSRFH + EF
Subjt:  EDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEF

Query:  DDTKRSCRRRLAGHNERRRK
        D+ KRSCRRRLAGHNERRRK
Subjt:  DDTKRSCRRRLAGHNERRRK

AT1G53160.2 squamosa promoter binding protein-like 43.6e-2857.5Show/hide
Query:  EDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEF
        EDM  D D++    EE+G    +R R S  +  RGG      ++  CQVD C A++  A+ YHRRHKVCE HAKA+ V L+GL QRFCQQCSRFH + EF
Subjt:  EDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEF

Query:  DDTKRSCRRRLAGHNERRRK
        D+ KRSCRRRLAGHNERRRK
Subjt:  DDTKRSCRRRLAGHNERRRK

AT2G42200.1 squamosa promoter binding protein-like 96.1e-2863.33Show/hide
Query:  RGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILP
        RGGG G    + RCQV+GC  +LT A+ Y+ RH+VC  H+K   V +AG+EQRFCQQCSRFH + EFD  KRSCRRRLAGHNERRRK  P
Subjt:  RGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILP

AT3G60030.1 squamosa promoter-binding protein-like 127.3e-2960Show/hide
Query:  GGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSST
        GGG  S    CQVD C A+L+  + YHRRHKVCE H+KA   ++ G+ QRFCQQCSRFH + EFD+ KRSCRRRLAGHN+RRRK  PD  G  ++
Subjt:  GGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFDDTKRSCRRRLAGHNERRRKILPDFQGQSST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACTCAGAAGATCAAGGTTGGGAGGACATGGTTGTAGATGACGACGACGACGATAACGACAATGAAGAAATAGGGTTTGCAGATAATGAGAGGAGGAGGAGATC
TGGTTTAACCAGTGGTCGTGGTGGCGGCGGAGGAGGAAGGTCAACGGTTGCGCGTTGCCAAGTTGATGGCTGCAATGCTAATCTGACCGGTGCAAGACCCTACCACCGCC
GCCACAAGGTCTGCGAGTTCCACGCCAAGGCGGCCGTGGTGATTCTGGCCGGATTGGAACAACGATTTTGCCAGCAGTGTAGTAGGTTTCATGCAGTATCGGAATTCGAT
GATACAAAGAGAAGCTGCCGGAGGCGTTTGGCTGGTCACAATGAACGCCGCCGAAAAATCTTACCGGATTTTCAAGGCCAATCCTCCACTAATTGA
mRNA sequenceShow/hide mRNA sequence
CTTCTCTTGGGAAATGGCAAACTCAGAAGATCAAGGTTGGGAGGACATGGTTGTAGATGACGACGACGACGATAACGACAATGAAGAAATAGGGTTTGCAGATAATGAGA
GGAGGAGGAGATCTGGTTTAACCAGTGGTCGTGGTGGCGGCGGAGGAGGAAGGTCAACGGTTGCGCGTTGCCAAGTTGATGGCTGCAATGCTAATCTGACCGGTGCAAGA
CCCTACCACCGCCGCCACAAGGTCTGCGAGTTCCACGCCAAGGCGGCCGTGGTGATTCTGGCCGGATTGGAACAACGATTTTGCCAGCAGTGTAGTAGGTTTCATGCAGT
ATCGGAATTCGATGATACAAAGAGAAGCTGCCGGAGGCGTTTGGCTGGTCACAATGAACGCCGCCGAAAAATCTTACCGGATTTTCAAGGCCAATCCTCCACTAATTGAA
CCACACACTCACTGTCTC
Protein sequenceShow/hide protein sequence
MANSEDQGWEDMVVDDDDDDNDNEEIGFADNERRRRSGLTSGRGGGGGGRSTVARCQVDGCNANLTGARPYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHAVSEFD
DTKRSCRRRLAGHNERRRKILPDFQGQSSTN