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PI0009955 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009955
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA polymerase epsilon catalytic subunit A, putative
Genome locationchr03:1907690..1908439
RNA-Seq ExpressionPI0009955
SyntenyPI0009955
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152691.1 uncharacterized protein LOC101215562 [Cucumis sativus]2.1e-6587.76Show/hide
Query:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAK-DVAAEAEFVENDLDRKNLVELKK
        MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLE+EHLRA+S+PV+   + ETVG+DYKRSSSFPPAK DVA EA+FVEN +DRKNL ELKK
Subjt:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAK-DVAAEAEFVENDLDRKNLVELKK

Query:  IGWWTRSNSAFLNEPPVLDGASKACVS-YGVADVASCKLNHSNGVGA
        IGWWTRSNSAFLNEPPVLDGASKACVS YGVADVASCKLNHSNGVGA
Subjt:  IGWWTRSNSAFLNEPPVLDGASKACVS-YGVADVASCKLNHSNGVGA

XP_008444729.1 PREDICTED: uncharacterized protein LOC103487979 [Cucumis melo]1.9e-6688.36Show/hide
Query:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAIS+PV+R+ +RE VGIDYKRSSSFPPA+DVA E++FVEN LDRKNL EL+K+
Subjt:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI

Query:  GWWTRSNSAFLNEPPVLDGASKACVS-YGVADVASCKLNHSNGVGA
        GWWTRSNSAFLNEPPVLDGASKACVS YGVADVASCKLNH+NGVGA
Subjt:  GWWTRSNSAFLNEPPVLDGASKACVS-YGVADVASCKLNHSNGVGA

XP_022144322.1 uncharacterized protein LOC111014033 [Momordica charantia]1.9e-5073.1Show/hide
Query:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI
        MGSLM GWNSPV DPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAISMPV+  V+R+ VGIDYKRSSSFPPA   A E     +D +RKNL +LK  
Subjt:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI

Query:  GWWTRSNSAFLNEPPVLDGASKACVSYGVADVASCKLNHSNGVGA
         WWTRSNSAFLNEPPVLDGA+KA         AS KLNHSNG+GA
Subjt:  GWWTRSNSAFLNEPPVLDGASKACVSYGVADVASCKLNHSNGVGA

XP_023002545.1 uncharacterized protein LOC111496358 [Cucurbita maxima]1.4e-5080Show/hide
Query:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI
        MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLEEEHLRAISMP    V+R+TVGIDYKRSSSFP A   A +  F E+DL+RKNL +LKK 
Subjt:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI

Query:  GWWTRSNSAFLNEPPVLDGASKACVS-YGVADVAS
        GWW RSNSAFLNEPPVLDGA+KA  S YGV DVAS
Subjt:  GWWTRSNSAFLNEPPVLDGASKACVS-YGVADVAS

XP_038886573.1 uncharacterized protein LOC120076743 [Benincasa hispida]1.2e-6585.62Show/hide
Query:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI
        MGSLM GWNSPVLDPKSVKFKRNRSLTK+EI+AYWKSK+K EEEHLRAISMPV+R+++RETVGIDYKRSSSFPPAKDV+AEAEF ENDL+R+NL +LKKI
Subjt:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI

Query:  GWWTRSNSAFLNEPPVLDGASKACVS-YGVADVASCKLNHSNGVGA
        GWWTRSNSAFLNEPPVLDGA+K   S YGVADVASCKLNHSNGVG+
Subjt:  GWWTRSNSAFLNEPPVLDGASKACVS-YGVADVASCKLNHSNGVGA

TrEMBL top hitse value%identityAlignment
A0A0A0LRI3 Uncharacterized protein1.0e-6587.76Show/hide
Query:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAK-DVAAEAEFVENDLDRKNLVELKK
        MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLE+EHLRA+S+PV+   + ETVG+DYKRSSSFPPAK DVA EA+FVEN +DRKNL ELKK
Subjt:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAK-DVAAEAEFVENDLDRKNLVELKK

Query:  IGWWTRSNSAFLNEPPVLDGASKACVS-YGVADVASCKLNHSNGVGA
        IGWWTRSNSAFLNEPPVLDGASKACVS YGVADVASCKLNHSNGVGA
Subjt:  IGWWTRSNSAFLNEPPVLDGASKACVS-YGVADVASCKLNHSNGVGA

A0A1S3BBS7 uncharacterized protein LOC1034879799.1e-6788.36Show/hide
Query:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAIS+PV+R+ +RE VGIDYKRSSSFPPA+DVA E++FVEN LDRKNL EL+K+
Subjt:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI

Query:  GWWTRSNSAFLNEPPVLDGASKACVS-YGVADVASCKLNHSNGVGA
        GWWTRSNSAFLNEPPVLDGASKACVS YGVADVASCKLNH+NGVGA
Subjt:  GWWTRSNSAFLNEPPVLDGASKACVS-YGVADVASCKLNHSNGVGA

A0A5A7VD66 Putative DNA polymerase epsilon catalytic subunit A9.1e-6788.36Show/hide
Query:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI
        MGSLMGGW+SPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAIS+PV+R+ +RE VGIDYKRSSSFPPA+DVA E++FVEN LDRKNL EL+K+
Subjt:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI

Query:  GWWTRSNSAFLNEPPVLDGASKACVS-YGVADVASCKLNHSNGVGA
        GWWTRSNSAFLNEPPVLDGASKACVS YGVADVASCKLNH+NGVGA
Subjt:  GWWTRSNSAFLNEPPVLDGASKACVS-YGVADVASCKLNHSNGVGA

A0A6J1CTD0 uncharacterized protein LOC1110140339.2e-5173.1Show/hide
Query:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI
        MGSLM GWNSPV DPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAISMPV+  V+R+ VGIDYKRSSSFPPA   A E     +D +RKNL +LK  
Subjt:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI

Query:  GWWTRSNSAFLNEPPVLDGASKACVSYGVADVASCKLNHSNGVGA
         WWTRSNSAFLNEPPVLDGA+KA         AS KLNHSNG+GA
Subjt:  GWWTRSNSAFLNEPPVLDGASKACVSYGVADVASCKLNHSNGVGA

A0A6J1KP90 uncharacterized protein LOC1114963587.0e-5180Show/hide
Query:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI
        MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEI+AYWKSKRKLEEEHLRAISMP    V+R+TVGIDYKRSSSFP A   A +  F E+DL+RKNL +LKK 
Subjt:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKI

Query:  GWWTRSNSAFLNEPPVLDGASKACVS-YGVADVAS
        GWW RSNSAFLNEPPVLDGA+KA  S YGV DVAS
Subjt:  GWWTRSNSAFLNEPPVLDGASKACVS-YGVADVAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein1.8e-1439.26Show/hide
Query:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRK-LEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKK
        MGSLM GW+S V DPKSV  +R +SLT+EEID +WK+K+K  EEEH++A S  V              +  +   AK+  +  +  EN        + K 
Subjt:  MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRK-LEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKK

Query:  IGWWTRSNSAFLNEPPVLDGASKACVS-YGVADVA
         GWW ++  AFLNEP   +G     VS + VA +A
Subjt:  IGWWTRSNSAFLNEPPVLDGASKACVS-YGVADVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCTCTAATGGGCGGATGGAATTCTCCTGTTCTCGATCCTAAATCAGTCAAGTTCAAGAGAAATCGATCACTTACGAAAGAAGAAATCGACGCATACTGGAAATC
GAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGATTTCTATGCCGGTTAATCGTTTTGTTGAACGCGAAACAGTCGGAATAGACTACAAAAGATCGAGTTCGTTTCCGC
CGGCGAAGGACGTTGCGGCGGAAGCAGAATTTGTAGAGAACGATTTGGACAGGAAAAACCTAGTGGAATTGAAGAAAATTGGCTGGTGGACGAGAAGTAATTCGGCGTTT
CTGAATGAACCGCCAGTCCTCGACGGCGCTTCAAAAGCTTGCGTGTCGTACGGCGTCGCCGACGTAGCCTCGTGTAAGTTGAATCACAGCAATGGAGTCGGTGCTTAG
mRNA sequenceShow/hide mRNA sequence
TTTCGCTCAATTTTTTCCGTGAACCTAAAATTTCAGTAGCAGAGAAATGGGCTCTCTAATGGGCGGATGGAATTCTCCTGTTCTCGATCCTAAATCAGTCAAGTTCAAGA
GAAATCGATCACTTACGAAAGAAGAAATCGACGCATACTGGAAATCGAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGATTTCTATGCCGGTTAATCGTTTTGTTGAA
CGCGAAACAGTCGGAATAGACTACAAAAGATCGAGTTCGTTTCCGCCGGCGAAGGACGTTGCGGCGGAAGCAGAATTTGTAGAGAACGATTTGGACAGGAAAAACCTAGT
GGAATTGAAGAAAATTGGCTGGTGGACGAGAAGTAATTCGGCGTTTCTGAATGAACCGCCAGTCCTCGACGGCGCTTCAAAAGCTTGCGTGTCGTACGGCGTCGCCGACG
TAGCCTCGTGTAAGTTGAATCACAGCAATGGAGTCGGTGCTTAGTTACACTGAAAGTGTGTG
Protein sequenceShow/hide protein sequence
MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISMPVNRFVERETVGIDYKRSSSFPPAKDVAAEAEFVENDLDRKNLVELKKIGWWTRSNSAF
LNEPPVLDGASKACVSYGVADVASCKLNHSNGVGA