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PI0009958 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009958
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr03:13137704..13138287
RNA-Seq ExpressionPI0009958
SyntenyPI0009958
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]3.9e-3764.34Show/hide
Query:  LMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKE
        L AWP++R+ VL WGIS HS ILFYPS +   R++ FRFFNHWVE+ SF +VV+ +W R  GVS LVSLM+NLH LKP+LRR FGRHI+SLSEEV  AKE
Subjt:  LMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKE

Query:  AMDRAQREVERDPGSVERSRDAGVAIDPF
        AMD AQREVER+P S   SR A +A + F
Subjt:  AMDRAQREVERDPGSVERSRDAGVAIDPF

KAA0059841.1 reverse transcriptase [Cucumis melo var. makuwa]5.1e-3764.34Show/hide
Query:  LMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKE
        L AWP++ V VL WGIS HS ILFYPS +   +++ FRFFNHWVED SF +VV+ +W R  GVSPLVSLM+NLH LKP LRR FGRHI+SLSEEV  AKE
Subjt:  LMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKE

Query:  AMDRAQREVERDPGSVERSRDAGVAIDPF
        AMDRAQR+VER+  S   SR A +A + F
Subjt:  AMDRAQREVERDPGSVERSRDAGVAIDPF

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]1.3e-3561.42Show/hide
Query:  AWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKEAM
        AWP++ V VL WGIS HS ILFYPS +   +++ F FFNHWVED SF +VV+ +W R  GVSP+VSLM+NLH LKP++RR FGRHI+SLSEEVR+AK A+
Subjt:  AWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKEAM

Query:  DRAQREVERDPGSVERSRDAGVAIDPF
        D AQREVER+P S   S  AG++ + F
Subjt:  DRAQREVERDPGSVERSRDAGVAIDPF

TYK26658.1 uncharacterized protein E5676_scaffold313G003080 [Cucumis melo var. makuwa]4.3e-3662.2Show/hide
Query:  AWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKEAM
        AWP++ V VL WGIS HS ILFYPS +   +++ F FFNHWVED SF +VV+ +W R  GVSP+VSLM+NLH LKP++RR FGRHI+SLSEEVR+AK AM
Subjt:  AWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKEAM

Query:  DRAQREVERDPGSVERSRDAGVAIDPF
        D AQREVER+P S   S  AG++ + F
Subjt:  DRAQREVERDPGSVERSRDAGVAIDPF

XP_008466769.1 PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]5.1e-3764.34Show/hide
Query:  LMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKE
        L AWP++ V VL WGIS HS ILFYPS +   +++ FRFFNHWVED SF +VV+ +W R  GVSPLVSLM+NLH LKP LRR FGRHI+SLSEEV  AKE
Subjt:  LMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKE

Query:  AMDRAQREVERDPGSVERSRDAGVAIDPF
        AMDRAQR+VER+  S   SR A +A + F
Subjt:  AMDRAQREVERDPGSVERSRDAGVAIDPF

TrEMBL top hitse value%identityAlignment
A0A1S3CRZ6 uncharacterized protein LOC1035041002.5e-3764.34Show/hide
Query:  LMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKE
        L AWP++ V VL WGIS HS ILFYPS +   +++ FRFFNHWVED SF +VV+ +W R  GVSPLVSLM+NLH LKP LRR FGRHI+SLSEEV  AKE
Subjt:  LMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKE

Query:  AMDRAQREVERDPGSVERSRDAGVAIDPF
        AMDRAQR+VER+  S   SR A +A + F
Subjt:  AMDRAQREVERDPGSVERSRDAGVAIDPF

A0A5A7TZS0 Reverse transcriptase domain-containing protein1.9e-3764.34Show/hide
Query:  LMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKE
        L AWP++R+ VL WGIS HS ILFYPS +   R++ FRFFNHWVE+ SF +VV+ +W R  GVS LVSLM+NLH LKP+LRR FGRHI+SLSEEV  AKE
Subjt:  LMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKE

Query:  AMDRAQREVERDPGSVERSRDAGVAIDPF
        AMD AQREVER+P S   SR A +A + F
Subjt:  AMDRAQREVERDPGSVERSRDAGVAIDPF

A0A5A7V275 Reverse transcriptase2.5e-3764.34Show/hide
Query:  LMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKE
        L AWP++ V VL WGIS HS ILFYPS +   +++ FRFFNHWVED SF +VV+ +W R  GVSPLVSLM+NLH LKP LRR FGRHI+SLSEEV  AKE
Subjt:  LMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKE

Query:  AMDRAQREVERDPGSVERSRDAGVAIDPF
        AMDRAQR+VER+  S   SR A +A + F
Subjt:  AMDRAQREVERDPGSVERSRDAGVAIDPF

A0A5A7V3Z0 Reverse transcriptase domain-containing protein6.1e-3661.42Show/hide
Query:  AWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKEAM
        AWP++ V VL WGIS HS ILFYPS +   +++ F FFNHWVED SF +VV+ +W R  GVSP+VSLM+NLH LKP++RR FGRHI+SLSEEVR+AK A+
Subjt:  AWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKEAM

Query:  DRAQREVERDPGSVERSRDAGVAIDPF
        D AQREVER+P S   S  AG++ + F
Subjt:  DRAQREVERDPGSVERSRDAGVAIDPF

A0A5D3DT20 Reverse transcriptase domain-containing protein2.1e-3662.2Show/hide
Query:  AWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKEAM
        AWP++ V VL WGIS HS ILFYPS +   +++ F FFNHWVED SF +VV+ +W R  GVSP+VSLM+NLH LKP++RR FGRHI+SLSEEVR+AK AM
Subjt:  AWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVRRLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKEAM

Query:  DRAQREVERDPGSVERSRDAGVAIDPF
        D AQREVER+P S   S  AG++ + F
Subjt:  DRAQREVERDPGSVERSRDAGVAIDPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCCGGTTACTGGTGATATGGAGGAGTTTGATCTTGCTATTCGTGATGCTGACTTGGTTGAGCCAGTTGTTTAG
GGAAACTGGTTCACTTGGACTAGTAAGGTACGAGGTTCAGGGGTTAATGGCTTGGCCTAGTCTGCGTGTTACTGTTTTGGCTTGGGGAATTTCTTACCATTCCCTTATTT
TATTCTATCCTAGTGTTGAGCAGCAGAGGCGTATTATATTGTTTCGTTTCTTTAATCATTGGGTGGAGGATACGTCTTTCAGTGATGTGGTGTCTTCAGTTTGGGTGAGA
AGGTTGGGTGTGTCTCCGTTAGTGAGTCTTATGCAGAATTTGCATGACCTTAAACCTGTGCTTCGTAGACATTTTGGTAGACATATCAGGAGCCTTAGTGAGGAGGTGCG
CTCGGCTAAAGAGGCTATGGATAGGGCCCAGCGAGAGGTTGAGCGGGATCCTGGGTCTGTGGAGAGGAGTCGTGATGCTGGTGTTGCGATTGATCCCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAATTCGAGTGCACTCTGAAGCTTGTGGTGGGAGTCCGGTTACTGGTGATATGGAGGAGTTTGATCTTGCTATTCGTGATGCTGACTTGGTTGAGCCAGTTGTTTAG
GGAAACTGGTTCACTTGGACTAGTAAGGTACGAGGTTCAGGGGTTAATGGCTTGGCCTAGTCTGCGTGTTACTGTTTTGGCTTGGGGAATTTCTTACCATTCCCTTATTT
TATTCTATCCTAGTGTTGAGCAGCAGAGGCGTATTATATTGTTTCGTTTCTTTAATCATTGGGTGGAGGATACGTCTTTCAGTGATGTGGTGTCTTCAGTTTGGGTGAGA
AGGTTGGGTGTGTCTCCGTTAGTGAGTCTTATGCAGAATTTGCATGACCTTAAACCTGTGCTTCGTAGACATTTTGGTAGACATATCAGGAGCCTTAGTGAGGAGGTGCG
CTCGGCTAAAGAGGCTATGGATAGGGCCCAGCGAGAGGTTGAGCGGGATCCTGGGTCTGTGGAGAGGAGTCGTGATGCTGGTGTTGCGATTGATCCCTTTTGA
Protein sequenceShow/hide protein sequence
MQFECTLKLVVGVRLLVIWRSLILLFVMLTWLSQLFRETGSLGLVRYEVQGLMAWPSLRVTVLAWGISYHSLILFYPSVEQQRRIILFRFFNHWVEDTSFSDVVSSVWVR
RLGVSPLVSLMQNLHDLKPVLRRHFGRHIRSLSEEVRSAKEAMDRAQREVERDPGSVERSRDAGVAIDPF