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PI0009976 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009976
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionvillin-1
Genome locationchr12:8052092..8053314
RNA-Seq ExpressionPI0009976
SyntenyPI0009976
Gene Ontology termsGO:0051014 - actin filament severing (biological process)
GO:0051693 - actin filament capping (biological process)
GO:0015629 - actin cytoskeleton (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061837.1 villin-1 [Cucumis melo var. makuwa]5.1e-4896.04Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQVDLVSGSLNSSYCYILQTG CIFTWI SLSSTRDHEILDRMVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

TYK15419.1 villin-1 [Cucumis melo var. makuwa]5.1e-4896.04Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQVDLVSGSLNSSYCYILQTG CIFTWI SLSSTRDHEILDRMVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

XP_004143215.1 villin-1 [Cucumis sativus]1.0e-4897.03Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQVDLVSGSLNSSYCYILQTGTCIFTWI SLSSTRDHEILDRMVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

XP_008464046.1 PREDICTED: villin-1 [Cucumis melo]5.1e-4896.04Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQVDLVSGSLNSSYCYILQTG CIFTWI SLSSTRDHEILDRMVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

XP_022148363.1 villin-1 [Momordica charantia]3.1e-4591.09Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQVDLVS SLNSSYCYILQT TCIFTWI SLSSTRDHEILDRMV+MINPTWQPVS+RE SEPDLF E L GKSEYQKGKEAKGPIEDPHLFVLNISE
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

TrEMBL top hitse value%identityAlignment
A0A0A0KC54 HP domain-containing protein5.0e-4997.03Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQVDLVSGSLNSSYCYILQTGTCIFTWI SLSSTRDHEILDRMVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

A0A1S3CKK6 villin-12.5e-4896.04Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQVDLVSGSLNSSYCYILQTG CIFTWI SLSSTRDHEILDRMVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

A0A5A7V4K5 Villin-12.5e-4896.04Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQVDLVSGSLNSSYCYILQTG CIFTWI SLSSTRDHEILDRMVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

A0A5D3CZ09 Villin-12.5e-4896.04Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQVDLVSGSLNSSYCYILQTG CIFTWI SLSSTRDHEILDRMVEMINPTWQPVSIRE SEPDLF EVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

A0A6J1D3W7 villin-11.5e-4591.09Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQVDLVS SLNSSYCYILQT TCIFTWI SLSSTRDHEILDRMV+MINPTWQPVS+RE SEPDLF E L GKSEYQKGKEAKGPIEDPHLFVLNISE
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

SwissProt top hitse value%identityAlignment
B8ATT7 Villin-45.2e-1946Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQVD VS SLNSSYCYIL  G  +FTW  +L+++ D+++++R +++I P     S +E  E D F E+L GK +Y   K  K    DPHLF   +S+
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

B8AY58 Villin-11.4e-2452.48Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        ++AIQVDL + SLNSS+CYILQ G   FTW+ SLSS  DH +LDRM++ + P  Q + +RE SEPD F E L G+SEY K K+ K    DPHL+  +  +
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

O81643 Villin-12.8e-2557.58Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNIS
        MQAIQV+LV+ SLNSSY YILQ G   FTWI  LSS  DHE+LDRM+  ++ + QP+ IRE +E D F  +L GKSEY K KE +  IE+PHLF  + S
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNIS

Q0DKN3 Villin-15.3e-2451.49Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        ++AIQVDL + SLNSS+CYILQ G   FTW+ SLSS  DH +LDRM++ + P  Q + +RE SEPD F E L G+SEY + K+ K    DPHL+  +  +
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

Q67U26 Villin-35.5e-2149.5Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQVD  + SLNSSYCY+L  G  +FTWI +LSS+ D E+ +R +++I P  Q   ++E SE D F ++L  KSEY   K AK    DPHLF    S+
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

Arabidopsis top hitse value%identityAlignment
AT2G29890.1 villin-like 12.0e-2657.58Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNIS
        MQAIQV+LV+ SLNSSY YILQ G   FTWI  LSS  DHE+LDRM+  ++ + QP+ IRE +E D F  +L GKSEY K KE +  IE+PHLF  + S
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNIS

AT2G29890.2 villin-like 14.1e-2757.43Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQV+LV+ SLNSSY YILQ G   FTWI  LSS  DHE+LDRM+  ++ + QP+ IRE +E D F  +L GKSEY K KE +  IE+PHLF  + S 
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

AT2G29890.3 villin-like 14.1e-2757.43Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE
        MQAIQV+LV+ SLNSSY YILQ G   FTWI  LSS  DHE+LDRM+  ++ + QP+ IRE +E D F  +L GKSEY K KE +  IE+PHLF  + S 
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISE

Query:  G
        G
Subjt:  G

AT4G30160.1 villin 46.3e-2048.94Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLF
        MQAIQVD V+ SLNSSY YIL   + +FTW  +LS+  D E+ +R +++I P  Q  + +E SE + F E+L GK+EY   K  K P  DPHLF
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLF

AT4G30160.2 villin 46.3e-2048.94Show/hide
Query:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLF
        MQAIQVD V+ SLNSSY YIL   + +FTW  +LS+  D E+ +R +++I P  Q  + +E SE + F E+L GK+EY   K  K P  DPHLF
Subjt:  MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCAATCCAAGTTGATCTAGTGTCAGGTTCCCTAAATTCATCCTACTGTTATATTCTTCAAACTGGAACATGCATTTTCACTTGGATTGACAGTCTCTCTTCAAC
CAGAGACCATGAAATTCTAGACAGGATGGTGGAAATGATAAATCCAACATGGCAACCTGTATCAATCAGGGAATGGAGTGAGCCTGATTTATTCTTGGAAGTACTTGATG
GAAAGTCAGAGTATCAAAAGGGAAAGGAGGCCAAAGGGCCCATTGAAGATCCACATTTATTTGTCTTGAACATCAGCGAAGGTTGGAAAAGGTGGAGATTTAACTCACGA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCAATCCAAGTTGATCTAGTGTCAGGTTCCCTAAATTCATCCTACTGTTATATTCTTCAAACTGGAACATGCATTTTCACTTGGATTGACAGTCTCTCTTCAAC
CAGAGACCATGAAATTCTAGACAGGATGGTGGAAATGATAAATCCAACATGGCAACCTGTATCAATCAGGGAATGGAGTGAGCCTGATTTATTCTTGGAAGTACTTGATG
GAAAGTCAGAGTATCAAAAGGGAAAGGAGGCCAAAGGGCCCATTGAAGATCCACATTTATTTGTCTTGAACATCAGCGAAGGTTGGAAAAGGTGGAGATTTAACTCACGA
TGA
Protein sequenceShow/hide protein sequence
MQAIQVDLVSGSLNSSYCYILQTGTCIFTWIDSLSSTRDHEILDRMVEMINPTWQPVSIREWSEPDLFLEVLDGKSEYQKGKEAKGPIEDPHLFVLNISEGWKRWRFNSR