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PI0009988 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0009988
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:8806165..8806469
RNA-Seq ExpressionPI0009988
SyntenyPI0009988
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD29770.1 TPA_asm: hypothetical protein HUJ06_031238 [Nelumbo nucifera]3.4e-2475.95Show/hide
Query:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE-------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKKK
        MA+DN+VQ A+ RFDGHYDHWSMLMENFLRSKE       +LKDLKAKNYLFQAIDR+ILE IL K+T K IWDSMKKK
Subjt:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE-------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKKK

DAD45562.1 TPA_asm: hypothetical protein HUJ06_003792 [Nelumbo nucifera]7.5e-2478.21Show/hide
Query:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKKK
        MAS+N+VQ AI RFDGHYDHWS+LMENFLRSKE      KLKDLKAKNYLFQ IDR+ILE IL K+T KQIWDSMKKK
Subjt:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKKK

TYK23210.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]8.3e-2362.38Show/hide
Query:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKK
        MASD+YVQ AI RFD HYDHWS+LMENFL+SKE                             KLKDLKAKNY FQAIDRAILE ILQK+TCKQIWDSMKK
Subjt:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKK

Query:  K
        K
Subjt:  K

XP_016649728.1 PREDICTED: uncharacterized protein LOC107881140 [Prunus mume]1.8e-2263.64Show/hide
Query:  SDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKKK
        +DNYVQ AILRF GHYDHWSMLMENFLRSKE                             KLKDLKAKNYLFQAIDR+ILE ILQK+T KQIWDSMKKK
Subjt:  SDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKKK

XP_027152457.1 uncharacterized protein LOC113752541 [Coffea eugenioides]4.1e-2261.39Show/hide
Query:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKK
        MA DN+VQ AI RFDGHYDHWSMLMENFLRSKE                             KLKDLKAKNYLFQAIDR ILE IL K+T KQ+WDSMKK
Subjt:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKK

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A5C7ICJ8 Reverse transcriptase Ty1/copia-type domain-containing protein4.4e-2260.4Show/hide
Query:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKK
        MAS+NYVQ +I RFDGHYDHWSMLMENFLRSKE                             KLKDLKAKNYLFQAIDR+ILE IL K + K+IWDSMKK
Subjt:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKK

Query:  K
        K
Subjt:  K

A0A5D3DIK7 Retrovirus-related Pol polyprotein from transposon TNT 1-944.0e-2362.38Show/hide
Query:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKK
        MASD+YVQ AI RFD HYDHWS+LMENFL+SKE                             KLKDLKAKNY FQAIDRAILE ILQK+TCKQIWDSMKK
Subjt:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKK

Query:  K
        K
Subjt:  K

A0A6P4B4Q9 dnaJ homolog subfamily B member 9-like7.6e-2260.4Show/hide
Query:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKK
        MA +N+VQ AI RFDGHYDHWSM+MENFLRSKE                             KLKDLKAKNYLFQAIDR+ILE IL K+T KQIWDSMKK
Subjt:  MASDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKK

Query:  K
        K
Subjt:  K

M5VLM8 Uncharacterized protein1.2e-2264.29Show/hide
Query:  DNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKKK
        DNYVQ AI RFDGHYDHWSMLMENFLRSKE                             KLKDLKAKNYLFQAIDR+ILE ILQK+T KQIWDSMKKK
Subjt:  DNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKKK

M5VYA0 Uncharacterized protein3.4e-2262.24Show/hide
Query:  SDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKK
        +DNYVQ AI RFDGHYDHWSMLMENFLRSKE                             KLKDLK KNYLFQAIDR+ILE ILQK+T KQIWDSMKK
Subjt:  SDNYVQQAILRFDGHYDHWSMLMENFLRSKE-----------------------------KLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAGACAACTATGTGCAACAAGCAATTCTCCGCTTTGATGGTCATTATGATCATTGGAGCATGTTGATGGAGAATTTCTTACGGTCCAAGGAAAAATTGAAGGA
TCTCAAGGCAAAGAATTATTTATTCCAAGCCATTGATCGTGCCATCTTGGAGATCATTTTGCAAAAGAATACATGTAAGCAAATTTGGGACTCCATGAAGAAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAGACAACTATGTGCAACAAGCAATTCTCCGCTTTGATGGTCATTATGATCATTGGAGCATGTTGATGGAGAATTTCTTACGGTCCAAGGAAAAATTGAAGGA
TCTCAAGGCAAAGAATTATTTATTCCAAGCCATTGATCGTGCCATCTTGGAGATCATTTTGCAAAAGAATACATGTAAGCAAATTTGGGACTCCATGAAGAAAAAGTAG
Protein sequenceShow/hide protein sequence
MASDNYVQQAILRFDGHYDHWSMLMENFLRSKEKLKDLKAKNYLFQAIDRAILEIILQKNTCKQIWDSMKKK