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PI0010018 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010018
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDDB1- and CUL4-associated factor 13
Genome locationchr11:19850512..19851185
RNA-Seq ExpressionPI0010018
SyntenyPI0010018
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043266.1 transforming growth factor-beta receptor-associated protein 1 isoform X1 [Cucumis melo var. makuwa]2.1e-0540Show/hide
Query:  GAVPKRNILLNRFTLHVEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWV
        G V  RN+LL+R  +  EEF    +      +RESP S   W  P +G WKLN +A W ++   GGI W+
Subjt:  GAVPKRNILLNRFTLHVEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWV
KAA0059118.1 DDB1- and CUL4-associated factor 13 [Cucumis melo var. makuwa]2.2e-0741.1Show/hide
Query:  PKRNILLNRFTLH-VEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWVFVTLL
        P  ++LL R  L  ++EF  KG       ++E+PMS   W+ P +G WKLN NASW +N    G+ WV + LL
Subjt:  PKRNILLNRFTLH-VEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWVFVTLL
TYK21623.1 DDB1- and CUL4-associated factor 13 [Cucumis melo var. makuwa]2.2e-0741.1Show/hide
Query:  PKRNILLNRFTLH-VEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWVFVTLL
        P  ++LL R  L  ++EF  KG       ++E+PMS   W+ P +G WKLN NASW +N    G+ WV + LL
Subjt:  PKRNILLNRFTLH-VEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWVFVTLL
TrEMBL top hitse value%identityAlignment
A0A5A7UV83 DDB1- and CUL4-associated factor 131.1e-0741.1Show/hide
Query:  PKRNILLNRFTLH-VEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWVFVTLL
        P  ++LL R  L  ++EF  KG       ++E+PMS   W+ P +G WKLN NASW +N    G+ WV + LL
Subjt:  PKRNILLNRFTLH-VEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWVFVTLL
A0A5D3DDM7 DDB1- and CUL4-associated factor 131.1e-0741.1Show/hide
Query:  PKRNILLNRFTLH-VEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWVFVTLL
        P  ++LL R  L  ++EF  KG       ++E+PMS   W+ P +G WKLN NASW +N    G+ WV + LL
Subjt:  PKRNILLNRFTLH-VEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWVFVTLL
A0A5D3E1D7 Transforming growth factor-beta receptor-associated protein 1 isoform X11.0e-0540Show/hide
Query:  GAVPKRNILLNRFTLHVEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWV
        G V  RN+LL+R  +  EEF    +      +RESP S   W  P +G WKLN +A W ++   GGI W+
Subjt:  GAVPKRNILLNRFTLHVEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCGGTGCCGAAGCGCAATATTTTGCTGAACAGGTTTACTCTTCATGTGGAGGAGTTCAGGAGCAAGGGTGCAACTGTATGTGCGCAGCGGAAGAGGGAGAGCCC
AATGAGTCAGGTGGGTTGGGTGTCGCCTGCTATTGGGTTCTGGAAGCTTAACTCCAATGCATCTTGGAGCAACAATAAGGAGGTTGGTGGCATTAGTTGGGTTTTCGTGA
CTCTACTAGATCTCACATCCTCGCTGGCTACAAGAAGGAGGTTGAGTTTGGTAAGATTGTCAAGGTGGTCTCGTTTAGGTGGTGCATTTGCTCGGCAAATGGTGTCACTC
ACTATTTGGCGTGGGATGCTTTGCACAAAGGGATTTGGATGGGTTGTTTTGTTTCTATCTCCTCTTCTTCCTTTGAAAGGAGTTATTAGGTCCTCATGTTGTATCCCGAA
TGTTTTCTCCTCCATTTTTGGGGAGGAGAGGTGTGGCTTTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCGGTGCCGAAGCGCAATATTTTGCTGAACAGGTTTACTCTTCATGTGGAGGAGTTCAGGAGCAAGGGTGCAACTGTATGTGCGCAGCGGAAGAGGGAGAGCCC
AATGAGTCAGGTGGGTTGGGTGTCGCCTGCTATTGGGTTCTGGAAGCTTAACTCCAATGCATCTTGGAGCAACAATAAGGAGGTTGGTGGCATTAGTTGGGTTTTCGTGA
CTCTACTAGATCTCACATCCTCGCTGGCTACAAGAAGGAGGTTGAGTTTGGTAAGATTGTCAAGGTGGTCTCGTTTAGGTGGTGCATTTGCTCGGCAAATGGTGTCACTC
ACTATTTGGCGTGGGATGCTTTGCACAAAGGGATTTGGATGGGTTGTTTTGTTTCTATCTCCTCTTCTTCCTTTGAAAGGAGTTATTAGGTCCTCATGTTGTATCCCGAA
TGTTTTCTCCTCCATTTTTGGGGAGGAGAGGTGTGGCTTTGATTAA
Protein sequenceShow/hide protein sequence
MGAVPKRNILLNRFTLHVEEFRSKGATVCAQRKRESPMSQVGWVSPAIGFWKLNSNASWSNNKEVGGISWVFVTLLDLTSSLATRRRLSLVRLSRWSRLGGAFARQMVSL
TIWRGMLCTKGFGWVVLFLSPLLPLKGVIRSSCCIPNVFSSIFGEERCGFD