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PI0010028 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010028
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBeta-galactosidase
Genome locationchr09:5996144..5996599
RNA-Seq ExpressionPI0010028
SyntenyPI0010028
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037910.1 Beta-galactosidase [Cucumis melo var. makuwa]8.7e-0640.43Show/hide
Query:  MVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFAL
        MVSEQGKD TLDT   E +   E  AAA   VVV         K++QQLQKM  +T+  S+ESS QHS  +  HA SL   WAH   S  LTTQ     +
Subjt:  MVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFAL

Query:  PPPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVNPS
          PVQ   P    H+ +     D       +T  P+S+  S
Subjt:  PPPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVNPS

KAA0059996.1 putative tRNA pseudouridine synthase [Cucumis melo var. makuwa]5.6e-0535.33Show/hide
Query:  EQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFALPPP
        EQ  ++TL+   EE +   E V AA     V A V TAMEK++Q LQK     +    +     S   + H   + GAWAHA     +T     F  P  
Subjt:  EQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFALPPP

Query:  VQQSNPSANTHAHAPPLPSDH-------------EQLPI-STTQPPLSVN
        VQ SNPS + H HAPP+ S+              +QL + S  QPP S N
Subjt:  VQQSNPSANTHAHAPPLPSDH-------------EQLPI-STTQPPLSVN

KAA0061447.1 Beta-galactosidase [Cucumis melo var. makuwa]5.1e-0637.7Show/hide
Query:  MVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFAL
        MVSEQ  ++TL+    E +   E V AA     +AA VD A+EK++Q LQK     +    +     S   L HA  + G WAHA     +T     F  
Subjt:  MVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFAL

Query:  PPPVQQSNPSANTHAHAPPLPS
        P  VQ SNPS + H HAP   S
Subjt:  PPPVQQSNPSANTHAHAPPLPS

TYK07826.1 chaperonin CPN60-2 [Cucumis melo var. makuwa]1.3e-0434.75Show/hide
Query:  FNMVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGF
        FNMVSEQ  ++ L+    EI+   E V  A +  + A I     EK++Q LQK+L   +    +         + HA  L GAWAHA  S  LT Q    
Subjt:  FNMVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGF

Query:  ALPPPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVN
             VQ S PS + H HA         LP+++ Q P +VN
Subjt:  ALPPPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVN

TYK19407.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]4.3e-0536.55Show/hide
Query:  MVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAM----EKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMN
        MVSEQ  ++TL+   EE +   E V      VVVAA VD A+    EK++  LQK     +   ++     S   + HA  + GAWAH S    +T Q  
Subjt:  MVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAM----EKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMN

Query:  GFALPPPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVNPS
         F  P  VQ SN S + H HAPP+         S  Q P +VN S
Subjt:  GFALPPPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVNPS

TrEMBL top hitse value%identityAlignment
A0A5A7T3J8 Beta-galactosidase4.2e-0640.43Show/hide
Query:  MVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFAL
        MVSEQGKD TLDT   E +   E  AAA   VVV         K++QQLQKM  +T+  S+ESS QHS  +  HA SL   WAH   S  LTTQ     +
Subjt:  MVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFAL

Query:  PPPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVNPS
          PVQ   P    H+ +     D       +T  P+S+  S
Subjt:  PPPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVNPS

A0A5A7U5U8 Chaperonin Cpn606.1e-0534.75Show/hide
Query:  FNMVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGF
        FNMVSEQ  ++ L+    EI+   E V  A +  + A I     EK++Q LQK+L   +    +         + HA  L GAWAHA  S  LT Q    
Subjt:  FNMVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGF

Query:  ALPPPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVN
             VQ S PS + H HA         LP+++ Q P +VN
Subjt:  ALPPPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVN

A0A5A7V0I4 Putative tRNA pseudouridine synthase2.7e-0535.33Show/hide
Query:  EQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFALPPP
        EQ  ++TL+   EE +   E V AA     V A V TAMEK++Q LQK     +    +     S   + H   + GAWAHA     +T     F  P  
Subjt:  EQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFALPPP

Query:  VQQSNPSANTHAHAPPLPSDH-------------EQLPI-STTQPPLSVN
        VQ SNPS + H HAPP+ S+              +QL + S  QPP S N
Subjt:  VQQSNPSANTHAHAPPLPSDH-------------EQLPI-STTQPPLSVN

A0A5A7V3J5 Beta-galactosidase2.5e-0637.7Show/hide
Query:  MVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFAL
        MVSEQ  ++TL+    E +   E V AA     +AA VD A+EK++Q LQK     +    +     S   L HA  + G WAHA     +T     F  
Subjt:  MVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFAL

Query:  PPPVQQSNPSANTHAHAPPLPS
        P  VQ SNPS + H HAP   S
Subjt:  PPPVQQSNPSANTHAHAPPLPS

A0A5D3D767 Cysteine-rich RLK (Receptor-like protein kinase) 82.1e-0536.55Show/hide
Query:  MVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAM----EKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMN
        MVSEQ  ++TL+   EE +   E V      VVVAA VD A+    EK++  LQK     +   ++     S   + HA  + GAWAH S    +T Q  
Subjt:  MVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAM----EKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMN

Query:  GFALPPPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVNPS
         F  P  VQ SN S + H HAPP+         S  Q P +VN S
Subjt:  GFALPPPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVNPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTTTTCTTTACCGCTTTTAATATGGTATCAGAGCAGGGTAAAGATAAAACCCTAGACACTGAATATGAGGAAATCAGAGCTAACCACGAGTATGTTGCCGCTGC
TGATATGAATGTCGTCGTCGCCGCCATCGTGGACACCGCCATGGAAAAAGTGGTCCAGCAGCTTCAGAAGATGCTGGCGATCACGTCTGCCACCTCCGCGGAGTCGTCCG
GACAGCACAGTGCTGCAGATCTGCATCACGCGTTGTCGCTGCCGGGCGCGTGGGCCCACGCGTCGCTGTCTGTGAGTCTCACCACCCAGATGAATGGATTCGCCTTGCCG
CCGCCAGTCCAACAGTCTAACCCTTCTGCCAATACGCACGCTCACGCGCCGCCGCTGCCCTCCGACCATGAACAGCTGCCTATTTCGACTACCCAGCCGCCGCTGTCTGT
TAATCCTTCACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTTTTCTTTACCGCTTTTAATATGGTATCAGAGCAGGGTAAAGATAAAACCCTAGACACTGAATATGAGGAAATCAGAGCTAACCACGAGTATGTTGCCGCTGC
TGATATGAATGTCGTCGTCGCCGCCATCGTGGACACCGCCATGGAAAAAGTGGTCCAGCAGCTTCAGAAGATGCTGGCGATCACGTCTGCCACCTCCGCGGAGTCGTCCG
GACAGCACAGTGCTGCAGATCTGCATCACGCGTTGTCGCTGCCGGGCGCGTGGGCCCACGCGTCGCTGTCTGTGAGTCTCACCACCCAGATGAATGGATTCGCCTTGCCG
CCGCCAGTCCAACAGTCTAACCCTTCTGCCAATACGCACGCTCACGCGCCGCCGCTGCCCTCCGACCATGAACAGCTGCCTATTTCGACTACCCAGCCGCCGCTGTCTGT
TAATCCTTCACAATAG
Protein sequenceShow/hide protein sequence
MSLFFTAFNMVSEQGKDKTLDTEYEEIRANHEYVAAADMNVVVAAIVDTAMEKVVQQLQKMLAITSATSAESSGQHSAADLHHALSLPGAWAHASLSVSLTTQMNGFALP
PPVQQSNPSANTHAHAPPLPSDHEQLPISTTQPPLSVNPSQ