; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0010047 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010047
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:3290295..3290982
RNA-Seq ExpressionPI0010047
SyntenyPI0010047
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047513.1 hypothetical protein E6C27_scaffold498G001420 [Cucumis melo var. makuwa]2.2e-2152.25Show/hide
Query:  MLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNIIYLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDI
        M+ +P+ LFAEY V R H   VSL  L+     G+++A+L I ++EEQN I+L F+ S  ST+PL R+L F VPMEDW  G V FDGK FSIES++F DI
Subjt:  MLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNIIYLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDI

Query:  ITTFYDYNEID
        I  F  +NE D
Subjt:  ITTFYDYNEID

KGN45637.1 hypothetical protein Csa_005027 [Cucumis sativus]1.9e-6881.48Show/hide
Query:  MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNII
        MF IKIDK DP LDAISLFTDIVND+ICLKF+LS+FSIIARYQ+PFFFAMLFIPE LFAEYFVGR+H LRVSL SL+   A+GQ+Y+SLRIHLQEEQNII
Subjt:  MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNII

Query:  YLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDIITTFYDYNEIDTS
         LAF+PSRHS VP+RRK+RFEVPMEDW +G++DFD KSFSIESD+FRDIITTFYDYNE+DTS
Subjt:  YLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDIITTFYDYNEIDTS

KGN61523.1 hypothetical protein Csa_006491 [Cucumis sativus]1.5e-2559.81Show/hide
Query:  MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNII
        MF IK+D  DPFLDA SLFT+ +ND+ICLKF+ S+FS+IARYQ P FFAMLF+P  LF EY V R H  R+SLR       +GQSY+S+ IHL+E QN I
Subjt:  MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNII

Query:  YLAFKPS
           F+PS
Subjt:  YLAFKPS

TYK26483.1 hypothetical protein E5676_scaffold313G00490 [Cucumis melo var. makuwa]2.2e-2152.25Show/hide
Query:  MLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNIIYLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDI
        M+ +P+ LFAEY V R H   VSL  L+     G+++A+L I ++EEQN I+L F+ S  ST+PL R+L F VPMEDW  G V FDGK FSIES++F DI
Subjt:  MLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNIIYLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDI

Query:  ITTFYDYNEID
        I  F  +NE D
Subjt:  ITTFYDYNEID

XP_031736681.1 uncharacterized protein LOC116402062 [Cucumis sativus]3.1e-3954.66Show/hide
Query:  MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNII
        MF IKID  DPFLDA  LF ++ +D+ICLKF  S+ SII RY+ P FF  + +P+ LF EY V R H  R+SL S Y+   + Q++A+L IHLQE+QN I
Subjt:  MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNII

Query:  YLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDIITTFYDYNEIDT
         L F+PS  ST+PL R+L F VPMEDW + QV+FDGK FSIES +F DII  F  + E +T
Subjt:  YLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDIITTFYDYNEIDT

TrEMBL top hitse value%identityAlignment
A0A0A0KB76 Uncharacterized protein9.1e-6981.48Show/hide
Query:  MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNII
        MF IKIDK DP LDAISLFTDIVND+ICLKF+LS+FSIIARYQ+PFFFAMLFIPE LFAEYFVGR+H LRVSL SL+   A+GQ+Y+SLRIHLQEEQNII
Subjt:  MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNII

Query:  YLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDIITTFYDYNEIDTS
         LAF+PSRHS VP+RRK+RFEVPMEDW +G++DFD KSFSIESD+FRDIITTFYDYNE+DTS
Subjt:  YLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDIITTFYDYNEIDTS

A0A0A0LIE0 Uncharacterized protein7.3e-2659.81Show/hide
Query:  MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNII
        MF IK+D  DPFLDA SLFT+ +ND+ICLKF+ S+FS+IARYQ P FFAMLF+P  LF EY V R H  R+SLR       +GQSY+S+ IHL+E QN I
Subjt:  MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNII

Query:  YLAFKPS
           F+PS
Subjt:  YLAFKPS

A0A5A7TVD7 Uncharacterized protein1.1e-2152.25Show/hide
Query:  MLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNIIYLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDI
        M+ +P+ LFAEY V R H   VSL  L+     G+++A+L I ++EEQN I+L F+ S  ST+PL R+L F VPMEDW  G V FDGK FSIES++F DI
Subjt:  MLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNIIYLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDI

Query:  ITTFYDYNEID
        I  F  +NE D
Subjt:  ITTFYDYNEID

A0A5D3DSC2 Uncharacterized protein1.1e-2152.25Show/hide
Query:  MLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNIIYLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDI
        M+ +P+ LFAEY V R H   VSL  L+     G+++A+L I ++EEQN I+L F+ S  ST+PL R+L F VPMEDW  G V FDGK FSIES++F DI
Subjt:  MLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNIIYLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDI

Query:  ITTFYDYNEID
        I  F  +NE D
Subjt:  ITTFYDYNEID

A0A6J1H2Z8 uncharacterized protein LOC1114600114.4e-1538.41Show/hide
Query:  MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNII
        MF++++  FDP ++A S+   I N +  LKF+ S FS+I  Y    F A   I    FA YFV R H+ RVSL+S Y     G  ++S+ IH  E  + +
Subjt:  MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNII

Query:  YLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDIIT
         L F+ S H+ + + R L+   P ++   GQ+  D + FSI S  FRDIIT
Subjt:  YLAFKPSRHSTVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDIIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGTTATCAAGATTGACAAGTTCGATCCTTTCTTGGATGCAATCTCCCTATTCACCGATATCGTAAACGACCAAATCTGCCTGAAATTCGCGCTGTCGTCGTTCTC
GATAATTGCTCGGTACCAATACCCTTTCTTCTTTGCAATGTTGTTTATACCGGAAGAGTTATTCGCCGAGTATTTCGTTGGTCGGGAACACGCTTTAAGGGTTTCCCTCC
GGTCCTTGTACGCTACTTTCGCAAAAGGTCAAAGCTATGCTTCATTGAGAATCCATCTTCAAGAAGAACAGAATATTATATATCTTGCATTTAAGCCTTCAAGGCATTCA
ACAGTACCATTGCGTCGTAAATTGAGATTCGAAGTGCCTATGGAAGATTGGCCTTCTGGACAAGTTGACTTTGATGGAAAGAGTTTCTCCATTGAGTCAGATGTGTTTAG
AGATATTATAACAACATTTTATGATTACAATGAAATTGATACAAGTAAATGCAATTTTTTTCCTTTTTTTTTTTTCATATATTTTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGTTATCAAGATTGACAAGTTCGATCCTTTCTTGGATGCAATCTCCCTATTCACCGATATCGTAAACGACCAAATCTGCCTGAAATTCGCGCTGTCGTCGTTCTC
GATAATTGCTCGGTACCAATACCCTTTCTTCTTTGCAATGTTGTTTATACCGGAAGAGTTATTCGCCGAGTATTTCGTTGGTCGGGAACACGCTTTAAGGGTTTCCCTCC
GGTCCTTGTACGCTACTTTCGCAAAAGGTCAAAGCTATGCTTCATTGAGAATCCATCTTCAAGAAGAACAGAATATTATATATCTTGCATTTAAGCCTTCAAGGCATTCA
ACAGTACCATTGCGTCGTAAATTGAGATTCGAAGTGCCTATGGAAGATTGGCCTTCTGGACAAGTTGACTTTGATGGAAAGAGTTTCTCCATTGAGTCAGATGTGTTTAG
AGATATTATAACAACATTTTATGATTACAATGAAATTGATACAAGTAAATGCAATTTTTTTCCTTTTTTTTTTTTCATATATTTTACTTGA
Protein sequenceShow/hide protein sequence
MFVIKIDKFDPFLDAISLFTDIVNDQICLKFALSSFSIIARYQYPFFFAMLFIPEELFAEYFVGREHALRVSLRSLYATFAKGQSYASLRIHLQEEQNIIYLAFKPSRHS
TVPLRRKLRFEVPMEDWPSGQVDFDGKSFSIESDVFRDIITTFYDYNEIDTSKCNFFPFFFFIYFT