CuGenDBv2

Gene ID	PI0010074
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Genome location	chr06:28452637..28455052
RNA-Seq Expression	PI0010074
Synteny	PI0010074
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0045138.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

8.0e-85

57.65

Show/hide

Query:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS
        MDYLS LL+ ++++ AIKGV  N+ C+++HILFADDILLF+ED+D  L NLR  L LFE ASGL  N  KS +  +NVS +RA + A+ W ISCH  PLS
Subjt:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS

Query:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV
        YLG PLGGNP S  FW    +KIQKKLNNWKY+ ISK G+LTLIK+TLSSLPI+ LS+F+AP             FLWK   GS  SHLINW+ ++  K 
Subjt:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV

Query:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN
        EG +GI  L  +N ALL+KWLWR+ SEP  LWRR+I  KYK N PG +P+    S+ KAPWRSII NIDWFKS  SW++ N
Subjt:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN

KAA0050814.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

6.6e-87

57.65

Show/hide

Query:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS
        MDYLS LL+ +++T AIKGV   N+C+++HILFADDILLFVED+D  L NLR  + LFE ASGL  N  KS++  +NV   RA + A+ W+ISCH  PL+
Subjt:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS

Query:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV
        YLG PLGGNP SK FW    ++IQKKL+NWKY++ISKGG+LTLIK+TLSSLPI+ LS+F+AP +           FLWK   GS  SHLINW+++T PK 
Subjt:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV

Query:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN
        EG +GI  L+ +N ALLSKWLWR++SEP +LWRR+I  KY+   PG +P+    SS KAPWRSII NIDWFK    WD+ N
Subjt:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN

TYJ99315.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

3.6e-85

58.01

Show/hide

Query:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS
        MDYLS LL+ ++++ AIKGV  N  C+++HILFADDILLF+ED+D  L NLR  L LFE ASGL  N  KS +  +NVS  RA + A+ W ISCH  PLS
Subjt:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS

Query:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV
        YLG PLGGNP S  FW    +KIQKKLNNWKY+ ISKGG+LTLIK+TLSSLPI+ LS+F+AP             FLWK   GS  SHLINW+ ++  K 
Subjt:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV

Query:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN
        EGG+GI  L  +N ALLSKWLWR+ SEP  LWRR+I  KYK   PG +P+    S+ KAPWRSII + DWFKS  SWD+ N
Subjt:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN

TYK05690.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

1.3e-87

58.36

Show/hide

Query:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS
        MDYLS LL+ +++T AIKGV   N+C+++HILFADDILLFVED+D  L NLR  + LFE ASGL  N  KS++ ++NVS  RA + A+ W ISCH  PL+
Subjt:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS

Query:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV
        YLG PLGGNP SK FW    ++IQKKL+NWKY++ISKGG+LTLIK+TLSSLPI+ LS+F+A  +           FLWK   GS  SHLINWS++T PK 
Subjt:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV

Query:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN
        EGG+GI  L+ +N ALLSKWLWR++SEP +LWRR+I  KY+   PG LP+    SS KAPWRSII NI+WFK    WD+ N
Subjt:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN

TYK05808.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]

3.3e-86

58.16

Show/hide

Query:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS
        MDYLS LL+ ++++ AIKGV   N+C+++HILFADDILLFVED+D  L NLR  L LFE ASGL  N  KS +  +NVS  RA + A+ W ISCH  PL+
Subjt:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS

Query:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV
        YLG PLGGNP S  FW    ++IQKKLNNWKY++ISKGG+LTLIK+TLSSL I+ LS+F+AP +           FLWK   G   SHLINWS++T  K 
Subjt:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV

Query:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKNE
        EGG+GI  L+  N ALLSKWLWR++SEP +LWRR+I  KYK   PG +P+    SS KAPW+SII NIDWFKS   WD+ NE
Subjt:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKNE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TQI1 LINE-1 retrotransposable element ORF2 protein

3.9e-85

57.65

Show/hide

Query:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS
        MDYLS LL+ ++++ AIKGV  N+ C+++HILFADDILLF+ED+D  L NLR  L LFE ASGL  N  KS +  +NVS +RA + A+ W ISCH  PLS
Subjt:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS

Query:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV
        YLG PLGGNP S  FW    +KIQKKLNNWKY+ ISK G+LTLIK+TLSSLPI+ LS+F+AP             FLWK   GS  SHLINW+ ++  K 
Subjt:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV

Query:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN
        EG +GI  L  +N ALL+KWLWR+ SEP  LWRR+I  KYK N PG +P+    S+ KAPWRSII NIDWFKS  SW++ N
Subjt:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN

A0A5D3BLV7 LINE-1 retrotransposable element ORF2 protein

1.7e-85

58.01

Show/hide

Query:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS
        MDYLS LL+ ++++ AIKGV  N  C+++HILFADDILLF+ED+D  L NLR  L LFE ASGL  N  KS +  +NVS  RA + A+ W ISCH  PLS
Subjt:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS

Query:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV
        YLG PLGGNP S  FW    +KIQKKLNNWKY+ ISKGG+LTLIK+TLSSLPI+ LS+F+AP             FLWK   GS  SHLINW+ ++  K 
Subjt:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV

Query:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN
        EGG+GI  L  +N ALLSKWLWR+ SEP  LWRR+I  KYK   PG +P+    S+ KAPWRSII + DWFKS  SWD+ N
Subjt:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN

A0A5D3C2W8 LINE-1 retrotransposable element ORF2 protein

6.4e-88

58.36

Show/hide

Query:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS
        MDYLS LL+ +++T AIKGV   N+C+++HILFADDILLFVED+D  L NLR  + LFE ASGL  N  KS++ ++NVS  RA + A+ W ISCH  PL+
Subjt:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS

Query:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV
        YLG PLGGNP SK FW    ++IQKKL+NWKY++ISKGG+LTLIK+TLSSLPI+ LS+F+A  +           FLWK   GS  SHLINWS++T PK 
Subjt:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV

Query:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN
        EGG+GI  L+ +N ALLSKWLWR++SEP +LWRR+I  KY+   PG LP+    SS KAPWRSII NI+WFK    WD+ N
Subjt:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN

A0A5D3C3M3 LINE-1 retrotransposable element ORF2 protein

1.6e-86

58.16

Show/hide

Query:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS
        MDYLS LL+ ++++ AIKGV   N+C+++HILFADDILLFVED+D  L NLR  L LFE ASGL  N  KS +  +NVS  RA + A+ W ISCH  PL+
Subjt:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS

Query:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV
        YLG PLGGNP S  FW    ++IQKKLNNWKY++ISKGG+LTLIK+TLSSL I+ LS+F+AP +           FLWK   G   SHLINWS++T  K 
Subjt:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV

Query:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKNE
        EGG+GI  L+  N ALLSKWLWR++SEP +LWRR+I  KYK   PG +P+    SS KAPW+SII NIDWFKS   WD+ NE
Subjt:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKNE

A0A5D3C9J6 LINE-1 retrotransposable element ORF2 protein

3.2e-87

57.65

Show/hide

Query:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS
        MDYLS LL+ +++T AIKGV   N+C+++HILFADDILLFVED+D  L NLR  + LFE ASGL  N  KS++  +NV   RA + A+ W+ISCH  PL+
Subjt:  MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLS

Query:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV
        YLG PLGGNP SK FW    ++IQKKL+NWKY++ISKGG+LTLIK+TLSSLPI+ LS+F+AP +           FLWK   GS  SHLINW+++T PK 
Subjt:  YLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKV

Query:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN
        EG +GI  L+ +N ALLSKWLWR++SEP +LWRR+I  KY+   PG +P+    SS KAPWRSII NIDWFK    WD+ N
Subjt:  EGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKN

SwissProt top hits

e value

%identity

Alignment

O00370 LINE-1 retrotransposable element ORF2 protein

1.8e-07

22.78

Show/hide

Query:  LSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLSYLG
        L  L   ++  K IKG+    E  +   LFADD+++++E+   +  NL  ++  F   SG   N +KS     N +    SQI  +   +     + YLG
Subjt:  LSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLSYLG

Query:  APLGGN--PISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATL--------SSLPIHLLSIF----KAPVAIFLWKSEKGSHVSHLINWSLITTPK
          L  +   + K  + P +++I++  N WK    S  G++ ++K  +        +++PI L   F    +     F+W  ++       I  S+++   
Subjt:  APLGGN--PISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATL--------SSLPIHLLSIF----KAPVAIFLWKSEKGSHVSHLINWSLITTPK

Query:  VEGGMGIDNLEDSNIALLSK--WLWRFHSEPTNLWRR
          GG+ + + +    A ++K  W W + +   + W R
Subjt:  VEGGMGIDNLEDSNIALLSK--WLWRFHSEPTNLWRR

P08548 LINE-1 reverse transcriptase homolog

9.1e-07

22.77

Show/hide

Query:  LSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLSYLG
        +  L   ++  KAIKG+   +E  +   LFADD+++++E+   +   L  V+  +   SG   N  KS+      +      + +    +     + YLG
Subjt:  LSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLSYLG

Query:  APLGGN--PISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATL--------SSLPIHL-LSIFKAPVAI---FLWKSEKGSHVSHLINWSLITTPK
          L  +   + K  ++   ++I + +N WK    S  G++ ++K ++        +++PI   LS FK    I   F+W  +K       I  +L++   
Subjt:  APLGGN--PISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATL--------SSLPIHL-LSIFKAPVAI---FLWKSEKGSHVSHLINWSLITTPK

Query:  VEGGMGIDNLE--DSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKS--LSSW------DIKNEVFKDENL
          GG+ + +L     +I + + W W  + E  ++W RI + +         P    +     P    IKNI W K    + W       I   +  D +L
Subjt:  VEGGMGIDNLE--DSNIALLSKWLWRFHSEPTNLWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKS--LSSW------DIKNEVFKDENL

Query:  SPL
        SPL
Subjt:  SPL

P0C2F6 Putative ribonuclease H protein At1g65750

1.4e-18

33.76

Show/hide

Query:  ISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKVEGGMGIDNLE
        I+K  +   +E++  +++ W+   +S  G+LTL KA LSS+P+H +S    P +I          FLW S       HL+ WS + +PK EGG+G+   +
Subjt:  ISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKGSHVSHLINWSLITTPKVEGGMGIDNLE

Query:  DSNIALLSKWLWRFHSEPTNLWRRIISAKY---KANTPGALPTQGKFSSMKAPWRSI
          N AL+SK  WR   E  +LW  ++  KY   +      L  +G +SS    WRSI
Subjt:  DSNIALLSKWLWRFHSEPTNLWRRIISAKY---KANTPGALPTQGKFSSMKAPWRSI

Arabidopsis top hits

e value

%identity

Alignment

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

1.8e-13

27.52

Show/hide

Query:  SQIANQWKISCHHFPLSYLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKG
        + I + +  +    P+ YLG PL    ++ + + P +EKI+ ++  W   ++S  G+L LI + + SL    +S F+ P A           FLW   + 
Subjt:  SQIANQWKISCHHFPLSYLGAPLGGNPISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAI----------FLWKSEKG

Query:  SHVSHLINWSLITTPKVEGGMGIDNLEDSN---------IALLSKWLWR
        +     + WS + TPK EGG+GI +L+++N            L  W+W+
Subjt:  SHVSHLINWSLITTPKVEGGMGIDNLEDSN---------IALLSKWLWR

AT4G29090.1 Ribonuclease H-like superfamily protein

1.9e-07

28.57

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Query:  SLPIHLLSIFKAP----------VAIFLWKSEKGSHVSHLINWSLITTPKVEGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKY
        +LP + ++ F  P          +A F W++++ +   H   W  ++  K EGG+G  ++E  N+ALL K +WR  S P +L  ++  ++Y
Subjt:  SLPIHLLSIFKAP----------VAIFLWKSEKGSHVSHLINWSLITTPKVEGGMGIDNLEDSNIALLSKWLWRFHSEPTNLWRRIISAKY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGACTATCTAAGTGCTCTCCTAAATCAAATGAAGAACACAAAGGCCATCAAAGGGGTGATCTTCAACAATGAATGTAGCTTGAATCACATCCTTTTTGCGGACGACAT
TCTTTTATTTGTAGAAGATGATGACTCTGCTCTTATAAACCTGAGAAATGTACTCTTCCTGTTTGAAGCGGCCTCAGGCTTGGTCAAAAACAGAGAAAAATCAATAATCT
CCTCAATAAATGTCTCAGCTGATCGAGCTTCTCAAATTGCAAATCAGTGGAAAATCTCTTGCCATCACTTTCCTCTAAGCTATCTAGGTGCTCCTCTTGGTGGTAACCCA
ATCTCCAAAGCTTTCTGGGATCCCACTATTGAGAAAATTCAGAAGAAATTAAACAATTGGAAATATTCCTATATTTCCAAAGGTGGCAAACTAACTCTGATTAAGGCGAC
ACTATCAAGTCTTCCAATTCATCTCTTATCGATCTTTAAAGCTCCTGTTGCGATTTTTTTATGGAAATCAGAAAAAGGATCTCATGTTTCCCACTTAATCAACTGGTCTT
TGATTACAACTCCAAAAGTTGAAGGAGGTATGGGTATTGATAATCTGGAAGACTCAAATATTGCTTTGTTAAGCAAATGGCTTTGGAGATTTCATTCAGAACCTACAAAC
CTTTGGAGAAGAATTATCTCAGCAAAATACAAAGCCAATACACCAGGAGCTTTACCAACTCAGGGAAAATTCAGTAGCATGAAAGCTCCCTGGAGATCAATCATAAAAAA
CATCGATTGGTTTAAAAGTCTTTCTTCTTGGGATATCAAAAATGAGGTCTTCAAGGATGAAAATCTCAGTCCTCTGTGCAATGATTCCAAGTTTCTTTGA

mRNA sequence

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Protein sequence

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MDYLSALLNQMKNTKAIKGVIFNNECSLNHILFADDILLFVEDDDSALINLRNVLFLFEAASGLVKNREKSIISSINVSADRASQIANQWKISCHHFPLSYLGAPLGGNP
ISKAFWDPTIEKIQKKLNNWKYSYISKGGKLTLIKATLSSLPIHLLSIFKAPVAIFLWKSEKGSHVSHLINWSLITTPKVEGGMGIDNLEDSNIALLSKWLWRFHSEPTN
LWRRIISAKYKANTPGALPTQGKFSSMKAPWRSIIKNIDWFKSLSSWDIKNEVFKDENLSPLCNDSKFL

PI0010074 (gene) of Melon (PI 482460) v1 genome