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PI0010100 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010100
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr02:17009023..17009888
RNA-Seq ExpressionPI0010100
SyntenyPI0010100
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056163.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]6.8e-0471.88Show/hide
Query:  VSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK
        +STKAG+RKILPNVPS+PIDGVSFH ++   K
Subjt:  VSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK
KAA0063826.1 uncharacterized protein E6C27_scaffold827G00450 [Cucumis melo var. makuwa]1.4e-0436.78Show/hide
Query:  DSHITLFDSVPIVPPSTVDNVSHSANETFRKIDNVFLLRLVVVRFANETLCKINKRVSTKAGRRKILPNVPSVPIDGVSFHCEDNVR
        D+H ++ + VP VPP+  DN++  +       D     +L   +F  +        ++TK GR+KI PN+PSVPIDG+SFH E++V+
Subjt:  DSHITLFDSVPIVPPSTVDNVSHSANETFRKIDNVFLLRLVVVRFANETLCKINKRVSTKAGRRKILPNVPSVPIDGVSFHCEDNVR
KAA0066271.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.8e-0475Show/hide
Query:  VSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK
        VSTK GRRK+ PNVPSVPIDGVSFH E+   K
Subjt:  VSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK
TYJ97654.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.8e-0475Show/hide
Query:  VSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK
        VSTK GRRK+ PNVPSVPIDGVSFH E+   K
Subjt:  VSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK
XP_008461540.2 PREDICTED: uncharacterized protein LOC103500112 [Cucumis melo]8.1e-0532.26Show/hide
Query:  VIFVNEDIVTDQPISPTFSEDNVILAQLVKRHKQSFDSHITLFDSVPIVPPSTVDNVSHSANETFRKIDNVFLLRLVVVRFANETLCKINKRVSTKAGRR
        +I  +E I T    S + ++DNV+L+ ++KR        I++  S+P    S  +  + ++   F+    +F  +  +            K V+TKA RR
Subjt:  VIFVNEDIVTDQPISPTFSEDNVILAQLVKRHKQSFDSHITLFDSVPIVPPSTVDNVSHSANETFRKIDNVFLLRLVVVRFANETLCKINKRVSTKAGRR

Query:  KILPNVPSVPIDGVSFHCEDNVRK
        K+  NVP VPIDG+SFH ED V K
Subjt:  KILPNVPSVPIDGVSFHCEDNVRK
TrEMBL top hitse value%identityAlignment
A0A1S3CEZ2 uncharacterized protein LOC1035001123.9e-0532.26Show/hide
Query:  VIFVNEDIVTDQPISPTFSEDNVILAQLVKRHKQSFDSHITLFDSVPIVPPSTVDNVSHSANETFRKIDNVFLLRLVVVRFANETLCKINKRVSTKAGRR
        +I  +E I T    S + ++DNV+L+ ++KR        I++  S+P    S  +  + ++   F+    +F  +  +            K V+TKA RR
Subjt:  VIFVNEDIVTDQPISPTFSEDNVILAQLVKRHKQSFDSHITLFDSVPIVPPSTVDNVSHSANETFRKIDNVFLLRLVVVRFANETLCKINKRVSTKAGRR

Query:  KILPNVPSVPIDGVSFHCEDNVRK
        K+  NVP VPIDG+SFH ED V K
Subjt:  KILPNVPSVPIDGVSFHCEDNVRK
A0A5A7UJM1 Flocculation protein FLO11-like3.3e-0471.88Show/hide
Query:  VSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK
        +STKAG+RKILPNVPS+PIDGVSFH ++   K
Subjt:  VSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK
A0A5A7VBM5 DUF4218 domain-containing protein6.7e-0536.78Show/hide
Query:  DSHITLFDSVPIVPPSTVDNVSHSANETFRKIDNVFLLRLVVVRFANETLCKINKRVSTKAGRRKILPNVPSVPIDGVSFHCEDNVR
        D+H ++ + VP VPP+  DN++  +       D     +L   +F  +        ++TK GR+KI PN+PSVPIDG+SFH E++V+
Subjt:  DSHITLFDSVPIVPPSTVDNVSHSANETFRKIDNVFLLRLVVVRFANETLCKINKRVSTKAGRRKILPNVPSVPIDGVSFHCEDNVR
A0A5A7VKU4 Gag-pol polyprotein3.3e-0475Show/hide
Query:  VSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK
        VSTK GRRK+ PNVPSVPIDGVSFH E+   K
Subjt:  VSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK
A0A5D3BF02 Gag-pol polyprotein3.3e-0475Show/hide
Query:  VSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK
        VSTK GRRK+ PNVPSVPIDGVSFH E+   K
Subjt:  VSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGCACTCATAAAGGTGGCTACAAGTCGTGTGATTCGAAGAAGAAAATTACTTCTTCCTCTTTAAGTTCAAAGAAGGATGTTGGTTCTCATGCTTCAACATCTAG
GGGCTCTCTATCTTCGTCCACAAGAAAGAGAAGTGCTCGAACTACTGAATCTTTTGATAAGATCATCCCTCCTCCTATTGATAATGAACAACCTCTGGTTGATCAACCCC
TGATGAGTTCTAATGTTATTGCTCCTGTTGACAATGTTGTTGAGAATGCTGAAATTTTTGTGATTTTTGTTAATGAGGACATTGTCACTGATCAACCTATATCTCCAACC
TTCTCTGAGGATAATGTCATTCTTGCTCAACTTGTAAAGCGCCATAAACAGTCGTTTGACTCTCATATTACCCTTTTCGATTCTGTTCCGATTGTGCCTCCATCCACTGT
CGACAATGTGTCCCATTCTGCCAATGAGACCTTTCGTAAAATCGATAACGTGTTTTTACTAAGGCTGGTCGTCGTAAGATTTGCCAATGAGACCCTTTGTAAAATCAATA
AGCGTGTTTCTACTAAAGCTGGTCGTCGTAAGATTTTGCCTAATGTGCCTTCTGTTCCAATTGATGGCGTGTCCTTCCATTGTGAGGACAATGTACGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGCACTCATAAAGGTGGCTACAAGTCGTGTGATTCGAAGAAGAAAATTACTTCTTCCTCTTTAAGTTCAAAGAAGGATGTTGGTTCTCATGCTTCAACATCTAG
GGGCTCTCTATCTTCGTCCACAAGAAAGAGAAGTGCTCGAACTACTGAATCTTTTGATAAGATCATCCCTCCTCCTATTGATAATGAACAACCTCTGGTTGATCAACCCC
TGATGAGTTCTAATGTTATTGCTCCTGTTGACAATGTTGTTGAGAATGCTGAAATTTTTGTGATTTTTGTTAATGAGGACATTGTCACTGATCAACCTATATCTCCAACC
TTCTCTGAGGATAATGTCATTCTTGCTCAACTTGTAAAGCGCCATAAACAGTCGTTTGACTCTCATATTACCCTTTTCGATTCTGTTCCGATTGTGCCTCCATCCACTGT
CGACAATGTGTCCCATTCTGCCAATGAGACCTTTCGTAAAATCGATAACGTGTTTTTACTAAGGCTGGTCGTCGTAAGATTTGCCAATGAGACCCTTTGTAAAATCAATA
AGCGTGTTTCTACTAAAGCTGGTCGTCGTAAGATTTTGCCTAATGTGCCTTCTGTTCCAATTGATGGCGTGTCCTTCCATTGTGAGGACAATGTACGAAAATGA
Protein sequenceShow/hide protein sequence
MVSTHKGGYKSCDSKKKITSSSLSSKKDVGSHASTSRGSLSSSTRKRSARTTESFDKIIPPPIDNEQPLVDQPLMSSNVIAPVDNVVENAEIFVIFVNEDIVTDQPISPT
FSEDNVILAQLVKRHKQSFDSHITLFDSVPIVPPSTVDNVSHSANETFRKIDNVFLLRLVVVRFANETLCKINKRVSTKAGRRKILPNVPSVPIDGVSFHCEDNVRK